RNA–Protein interactions for RNA: ENST00000560881.5

RPL28-211, Transcript of ribosomal protein L28, humanhuman

TSL 5

Gene RPL28, Length 1,692 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-211ENST00000560881 PALLDQ8WX93 1383 aa22.08■■□□□ 1.12
RPL28-211ENST00000560881 MCM10Q7L590 875 aa22.07■■□□□ 1.12
RPL28-211ENST00000560881 NFE2L2Q16236 605 aa22.07■■□□□ 1.12
RPL28-211ENST00000560881 RRP7AQ9Y3A4 280 aaKnown RBP22.07■■□□□ 1.12
RPL28-211ENST00000560881 SLC52A2Q9HAB3 445 aa22.06■■□□□ 1.12
RPL28-211ENST00000560881 ATG3Q9NT62 314 aa22.06■■□□□ 1.12
RPL28-211ENST00000560881 LRRC4BQ9NT99 713 aa22.06■■□□□ 1.12
RPL28-211ENST00000560881 PAPPAQ13219 1627 aa22.06■■□□□ 1.12
RPL28-211ENST00000560881 RUNDC1Q96C34 613 aa22.05■■□□□ 1.12
RPL28-211ENST00000560881 CEMIPQ8WUJ3 1361 aa22.05■■□□□ 1.12
RPL28-211ENST00000560881 SENP3-EIF4A1A0A087X0R7 540 aa22.04■■□□□ 1.12
RPL28-211ENST00000560881 RTF1Q92541 710 aaKnown RBP22.04■■□□□ 1.12
RPL28-211ENST00000560881 TMPOP42166 694 aaKnown RBP22.03■■□□□ 1.12
RPL28-211ENST00000560881 NEUROD2Q15784 382 aa22.03■■□□□ 1.12
RPL28-211ENST00000560881 THUMPD2Q9BTF0 503 aaKnown RBP22.03■■□□□ 1.12
RPL28-211ENST00000560881 TAF1LQ8IZX4 1826 aa22.03■■□□□ 1.12
RPL28-211ENST00000560881 SLC39A6Q13433 755 aa22.02■■□□□ 1.12
RPL28-211ENST00000560881 ANO8Q9HCE9 1232 aaPredicted RBP22.02■■□□□ 1.12
RPL28-211ENST00000560881 C5P01031 1676 aa22.02■■□□□ 1.12
RPL28-211ENST00000560881 RIPK4P57078 832 aa22.01■■□□□ 1.11
RPL28-211ENST00000560881 TEFQ10587 303 aa22.01■■□□□ 1.11
RPL28-211ENST00000560881 MIER1Q8N108 512 aa22.01■■□□□ 1.11
RPL28-211ENST00000560881 CCNL1Q9UK58 526 aaPredicted RBP22.01■■□□□ 1.11
RPL28-211ENST00000560881 FAM9BQ8IZU0 186 aa22.01■■□□□ 1.11
RPL28-211ENST00000560881 SMARCC1Q92922 1105 aaPredicted RBP22.01■■□□□ 1.11
RPL28-211ENST00000560881 UBR2Q8IWV8 1755 aa21.99■■□□□ 1.11
RPL28-211ENST00000560881 APAF1O14727 1248 aa21.99■■□□□ 1.11
RPL28-211ENST00000560881 LOC102724428A0A0B4J2F2 783 aa21.98■■□□□ 1.11
RPL28-211ENST00000560881 PTCD1O75127 700 aaKnown RBP21.98■■□□□ 1.11
RPL28-211ENST00000560881 SIK1P57059 783 aa21.98■■□□□ 1.11
RPL28-211ENST00000560881 SLC27A3Q5K4L6 730 aa21.98■■□□□ 1.11
RPL28-211ENST00000560881 RBM42Q9BTD8 480 aaKnown RBP21.98■■□□□ 1.11
RPL28-211ENST00000560881 PSDA5PKW4 1024 aaPredicted RBP21.98■■□□□ 1.11
RPL28-211ENST00000560881 HTATSF1O43719 755 aaKnown RBP21.98■■□□□ 1.11
RPL28-211ENST00000560881 SLC4A9Q96Q91 983 aa21.98■■□□□ 1.11
RPL28-211ENST00000560881 KCPQ6ZWJ8 1503 aa21.98■■□□□ 1.11
RPL28-211ENST00000560881 TUBGCP6Q96RT7 1819 aa21.97■■□□□ 1.11
RPL28-211ENST00000560881 R3HDM1Q15032 1099 aaKnown RBP21.96■■□□□ 1.11
RPL28-211ENST00000560881 TJP1Q07157 1748 aa21.96■■□□□ 1.11
RPL28-211ENST00000560881 ZNF827Q17R98 1081 aa21.95■■□□□ 1.1
RPL28-211ENST00000560881 TRIM35Q9UPQ4 493 aa21.95■■□□□ 1.1
RPL28-211ENST00000560881 KCNQ3O43525 872 aa21.95■■□□□ 1.1
RPL28-211ENST00000560881 ITPK1Q13572 414 aa21.95■■□□□ 1.1
RPL28-211ENST00000560881 C4BP0C0L5 1744 aa21.94■■□□□ 1.1
RPL28-211ENST00000560881 COL5A3P25940 1745 aaPredicted RBP21.94■■□□□ 1.1
RPL28-211ENST00000560881 BTBD11A6QL63 1104 aa21.94■■□□□ 1.1
RPL28-211ENST00000560881 CCER2I3L3R5 266 aa21.94■■□□□ 1.1
RPL28-211ENST00000560881 ATP6V1AP38606 617 aa21.94■■□□□ 1.1
RPL28-211ENST00000560881 ZNF831Q5JPB2 1677 aa21.94■■□□□ 1.1
RPL28-211ENST00000560881 KDM3BQ7LBC6 1761 aa21.93■■□□□ 1.1
RPL28-211ENST00000560881 MIS18AQ9NYP9 233 aa21.93■■□□□ 1.1
RPL28-211ENST00000560881 NBPF14Q5TI25 921 aa21.92■■□□□ 1.1
RPL28-211ENST00000560881 ZNF790Q6PG37 636 aa21.92■■□□□ 1.1
RPL28-211ENST00000560881 LINC00116Q8NCU8 138 aa21.92■■□□□ 1.1
RPL28-211ENST00000560881 LMOD3Q0VAK6 560 aa21.91■■□□□ 1.1
RPL28-211ENST00000560881 AKT1S1Q96B36 256 aa21.91■■□□□ 1.1
RPL28-211ENST00000560881 STK32BQ9NY57 414 aa21.91■■□□□ 1.1
RPL28-211ENST00000560881 SRCAPQ6ZRS2 3230 aa21.91■■□□□ 1.1
RPL28-211ENST00000560881 CICQ96RK0 1608 aaPredicted RBP21.9■■□□□ 1.1
RPL28-211ENST00000560881 SLC15A2Q16348 729 aa21.9■■□□□ 1.1
RPL28-211ENST00000560881 TTC5Q8N0Z6 440 aa21.9■■□□□ 1.1
RPL28-211ENST00000560881 MYH14Q7Z406 1995 aaKnown RBP21.89■■□□□ 1.1
RPL28-211ENST00000560881 TAF7Q15545 349 aaPredicted RBP21.89■■□□□ 1.1
RPL28-211ENST00000560881 ZNF496Q96IT1 587 aaPredicted RBP21.89■■□□□ 1.1
RPL28-211ENST00000560881 PDGFDQ9GZP0 370 aaPredicted RBP21.89■■□□□ 1.1
RPL28-211ENST00000560881 SALL2Q9Y467 1007 aaPredicted RBP21.88■■□□□ 1.09
RPL28-211ENST00000560881 UBR3Q6ZT12 1888 aa21.88■■□□□ 1.09
RPL28-211ENST00000560881 SMIM5Q71RC9 77 aa21.88■■□□□ 1.09
RPL28-211ENST00000560881 CASZ1Q86V15 1759 aa21.87■■□□□ 1.09
RPL28-211ENST00000560881 QSER1Q2KHR3 1735 aa21.87■■□□□ 1.09
RPL28-211ENST00000560881 AMIGO3Q86WK7 504 aa21.87■■□□□ 1.09
RPL28-211ENST00000560881 DNAJC10Q8IXB1 793 aa21.87■■□□□ 1.09
RPL28-211ENST00000560881 TFCP2L1Q9NZI6 479 aa21.85■■□□□ 1.09
RPL28-211ENST00000560881 LAS1LQ9Y4W2 734 aaKnown RBP21.85■■□□□ 1.09
RPL28-211ENST00000560881 HEG1Q9ULI3 1381 aa21.85■■□□□ 1.09
RPL28-211ENST00000560881 PRAMEF22A3QJZ6 481 aa21.84■■□□□ 1.09
RPL28-211ENST00000560881 AK7Q96M32 723 aa21.84■■□□□ 1.09
RPL28-211ENST00000560881 TSPYL4Q9UJ04 414 aa21.84■■□□□ 1.09
RPL28-211ENST00000560881 PNPLA7Q6ZV29 1317 aa21.83■■□□□ 1.09
RPL28-211ENST00000560881 FMNL2Q96PY5 1086 aa21.83■■□□□ 1.09
RPL28-211ENST00000560881 PHF14O94880 888 aa21.82■■□□□ 1.08
RPL28-211ENST00000560881 GNPATO15228 680 aa21.81■■□□□ 1.08
RPL28-211ENST00000560881 CRKLP46109 303 aaKnown RBP21.81■■□□□ 1.08
RPL28-211ENST00000560881 VSIG10Q8N0Z9 540 aa21.81■■□□□ 1.08
RPL28-211ENST00000560881 WWC1Q8IX03 1113 aa21.8■■□□□ 1.08
RPL28-211ENST00000560881 CNTNAP4Q9C0A0 1308 aa21.8■■□□□ 1.08
RPL28-211ENST00000560881 LAMB4A4D0S4 1761 aa21.79■■□□□ 1.08
RPL28-211ENST00000560881 CYP19A1P11511 503 aaPredicted RBP21.79■■□□□ 1.08
RPL28-211ENST00000560881 EIF4A1P60842 406 aaKnown RBP21.79■■□□□ 1.08
RPL28-211ENST00000560881 C4AP0C0L4 1744 aa21.78■■□□□ 1.08
RPL28-211ENST00000560881 CHL1O00533 1208 aa21.78■■□□□ 1.08
RPL28-211ENST00000560881 CCDC27Q2M243 656 aa21.78■■□□□ 1.08
RPL28-211ENST00000560881 INTS5Q6P9B9 1019 aaKnown RBP21.78■■□□□ 1.08
RPL28-211ENST00000560881 COL23A1Q86Y22 540 aaPredicted RBP21.78■■□□□ 1.08
RPL28-211ENST00000560881 USP16Q9Y5T5 823 aa21.78■■□□□ 1.08
RPL28-211ENST00000560881 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.77■■□□□ 1.08
RPL28-211ENST00000560881 KRT24Q2M2I5 525 aa21.77■■□□□ 1.08
RPL28-211ENST00000560881 ZBTB1Q9Y2K1 713 aa21.77■■□□□ 1.08
RPL28-211ENST00000560881 MSH5O43196 834 aa21.76■■□□□ 1.07
RPL28-211ENST00000560881 ZBTB7AO95365 584 aa21.76■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms