RNA–Protein interactions for RNA: ENST00000560428.1

TNFAIP2-206, Transcript of TNF alpha induced protein 2, humanhuman

TSL 5

Gene TNFAIP2, Length 773 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP2-206ENST00000560428 AK7Q96M32 723 aa24.33■■□□□ 1.49
TNFAIP2-206ENST00000560428 SCN11AQ9UI33 1791 aa24.31■■□□□ 1.48
TNFAIP2-206ENST00000560428 MSH5O43196 834 aa24.31■■□□□ 1.48
TNFAIP2-206ENST00000560428 ATP6V1AP38606 617 aa24.3■■□□□ 1.48
TNFAIP2-206ENST00000560428 CABP4P57796 275 aa24.3■■□□□ 1.48
TNFAIP2-206ENST00000560428 AKAP4Q5JQC9 854 aa24.3■■□□□ 1.48
TNFAIP2-206ENST00000560428 LINC00116Q8NCU8 138 aa24.3■■□□□ 1.48
TNFAIP2-206ENST00000560428 ITPK1Q13572 414 aa24.29■■□□□ 1.48
TNFAIP2-206ENST00000560428 HMOX1P09601 288 aa24.28■■□□□ 1.48
TNFAIP2-206ENST00000560428 SSFA2P28290 1259 aa24.28■■□□□ 1.48
TNFAIP2-206ENST00000560428 CNGB1Q14028 1251 aaPredicted RBP24.27■■□□□ 1.48
TNFAIP2-206ENST00000560428 COL5A3P25940 1745 aaPredicted RBP24.26■■□□□ 1.47
TNFAIP2-206ENST00000560428 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.25■■□□□ 1.47
TNFAIP2-206ENST00000560428 MRC1P22897 1456 aa24.25■■□□□ 1.47
TNFAIP2-206ENST00000560428 ADAMTS7Q9UKP4 1686 aa24.24■■□□□ 1.47
TNFAIP2-206ENST00000560428 AMIGO3Q86WK7 504 aa24.24■■□□□ 1.47
TNFAIP2-206ENST00000560428 NFATC2IPQ8NCF5 419 aa24.24■■□□□ 1.47
TNFAIP2-206ENST00000560428 RBM42Q9BTD8 480 aaKnown RBP24.24■■□□□ 1.47
TNFAIP2-206ENST00000560428 CICQ96RK0 1608 aaPredicted RBP24.24■■□□□ 1.47
TNFAIP2-206ENST00000560428 SLC4A9Q96Q91 983 aa24.23■■□□□ 1.47
TNFAIP2-206ENST00000560428 VIRMAQ69YN4 1812 aaKnown RBP24.23■■□□□ 1.47
TNFAIP2-206ENST00000560428 GNPATO15228 680 aa24.22■■□□□ 1.47
TNFAIP2-206ENST00000560428 PHF14O94880 888 aa24.22■■□□□ 1.47
TNFAIP2-206ENST00000560428 MSL1Q68DK7 614 aa24.22■■□□□ 1.47
TNFAIP2-206ENST00000560428 CFAP53Q96M91 514 aa24.22■■□□□ 1.47
TNFAIP2-206ENST00000560428 U2SURPO15042 1029 aaKnown RBP24.21■■□□□ 1.47
TNFAIP2-206ENST00000560428 MTHFSDQ2M296 383 aaKnown RBP24.21■■□□□ 1.47
TNFAIP2-206ENST00000560428 CNTNAP4Q9C0A0 1308 aa24.2■■□□□ 1.46
TNFAIP2-206ENST00000560428 RC3H1Q5TC82 1133 aaKnown RBP24.2■■□□□ 1.46
TNFAIP2-206ENST00000560428 SLC52A2Q9HAB3 445 aa24.2■■□□□ 1.46
TNFAIP2-206ENST00000560428 RNMTO43148 476 aaKnown RBP24.19■■□□□ 1.46
TNFAIP2-206ENST00000560428 KLHL34Q8N239 644 aa24.19■■□□□ 1.46
TNFAIP2-206ENST00000560428 YY1P25490 414 aa24.18■■□□□ 1.46
TNFAIP2-206ENST00000560428 PPP2R1AP30153 589 aa24.18■■□□□ 1.46
TNFAIP2-206ENST00000560428 LGR6Q9HBX8 967 aa24.18■■□□□ 1.46
TNFAIP2-206ENST00000560428 TJP1Q07157 1748 aa24.18■■□□□ 1.46
TNFAIP2-206ENST00000560428 SMIM5Q71RC9 77 aa24.17■■□□□ 1.46
TNFAIP2-206ENST00000560428 RTCBQ9Y3I0 505 aaKnown RBP24.17■■□□□ 1.46
TNFAIP2-206ENST00000560428 PTCD1O75127 700 aaKnown RBP24.16■■□□□ 1.46
TNFAIP2-206ENST00000560428 ADRA2BP18089 450 aa24.16■■□□□ 1.46
TNFAIP2-206ENST00000560428 GAS2L2Q8NHY3 880 aa24.15■■□□□ 1.46
TNFAIP2-206ENST00000560428 NUDCQ9Y266 331 aa24.15■■□□□ 1.46
TNFAIP2-206ENST00000560428 UTRNP46939 3433 aa24.15■■□□□ 1.46
TNFAIP2-206ENST00000560428 TRAPPC3LQ5T215 181 aa24.14■■□□□ 1.45
TNFAIP2-206ENST00000560428 NLGN2Q8NFZ4 835 aa24.14■■□□□ 1.45
TNFAIP2-206ENST00000560428 CD2APQ9Y5K6 639 aa24.14■■□□□ 1.45
TNFAIP2-206ENST00000560428 MYH14Q7Z406 1995 aaKnown RBP24.14■■□□□ 1.45
TNFAIP2-206ENST00000560428 RPS6KA4O75676 772 aa24.13■■□□□ 1.45
TNFAIP2-206ENST00000560428 KCPQ6ZWJ8 1503 aa24.11■■□□□ 1.45
TNFAIP2-206ENST00000560428 GPR162Q16538 588 aa24.11■■□□□ 1.45
TNFAIP2-206ENST00000560428 RSPH6AQ9H0K4 717 aa24.11■■□□□ 1.45
TNFAIP2-206ENST00000560428 CHD4Q14839 1912 aa24.11■■□□□ 1.45
TNFAIP2-206ENST00000560428 UBR2Q8IWV8 1755 aa24.11■■□□□ 1.45
TNFAIP2-206ENST00000560428 C4AP0C0L4 1744 aa24.1■■□□□ 1.45
TNFAIP2-206ENST00000560428 GNAT3A8MTJ3 354 aa24.1■■□□□ 1.45
TNFAIP2-206ENST00000560428 CRKLP46109 303 aaKnown RBP24.1■■□□□ 1.45
TNFAIP2-206ENST00000560428 PRKAR2BP31323 418 aa24.09■■□□□ 1.45
TNFAIP2-206ENST00000560428 ARHGEF1Q92888 912 aaKnown RBP24.09■■□□□ 1.45
TNFAIP2-206ENST00000560428 SIPA1L3O60292 1781 aaPredicted RBP24.08■■□□□ 1.45
TNFAIP2-206ENST00000560428 NLGN1Q8N2Q7 840 aa24.08■■□□□ 1.45
TNFAIP2-206ENST00000560428 U2AF1L5P0DN76 240 aaPredicted RBP24.07■■□□□ 1.44
TNFAIP2-206ENST00000560428 RFC4P35249 363 aa24.07■■□□□ 1.44
TNFAIP2-206ENST00000560428 U2AF1Q01081 240 aaKnown RBP eCLIP24.07■■□□□ 1.44
TNFAIP2-206ENST00000560428 SLC39A6Q13433 755 aa24.07■■□□□ 1.44
TNFAIP2-206ENST00000560428 GOLGB1Q14789 3259 aaKnown RBP24.07■■□□□ 1.44
TNFAIP2-206ENST00000560428 FCHSD2O94868 740 aa24.06■■□□□ 1.44
TNFAIP2-206ENST00000560428 VSIG10Q8N0Z9 540 aa24.06■■□□□ 1.44
TNFAIP2-206ENST00000560428 IL17REQ8NFR9 667 aa24.06■■□□□ 1.44
TNFAIP2-206ENST00000560428 PHACTR3Q96KR7 559 aa24.06■■□□□ 1.44
TNFAIP2-206ENST00000560428 CEMIPQ8WUJ3 1361 aa24.05■■□□□ 1.44
TNFAIP2-206ENST00000560428 TEFQ10587 303 aa24.05■■□□□ 1.44
TNFAIP2-206ENST00000560428 DNAJC10Q8IXB1 793 aa24.05■■□□□ 1.44
TNFAIP2-206ENST00000560428 MMP10P09238 476 aa24.04■■□□□ 1.44
TNFAIP2-206ENST00000560428 GYS1P13807 737 aa24.04■■□□□ 1.44
TNFAIP2-206ENST00000560428 INTS5Q6P9B9 1019 aaKnown RBP24.04■■□□□ 1.44
TNFAIP2-206ENST00000560428 PELP1Q8IZL8 1130 aaKnown RBP24.04■■□□□ 1.44
TNFAIP2-206ENST00000560428 CCDC87Q9NVE4 849 aa24.04■■□□□ 1.44
TNFAIP2-206ENST00000560428 TTC5Q8N0Z6 440 aa24.03■■□□□ 1.44
TNFAIP2-206ENST00000560428 KIF13BQ9NQT8 1826 aa24.03■■□□□ 1.44
TNFAIP2-206ENST00000560428 GRIN3BO60391 1043 aa24.02■■□□□ 1.44
TNFAIP2-206ENST00000560428 CYP19A1P11511 503 aaPredicted RBP24.02■■□□□ 1.44
TNFAIP2-206ENST00000560428 USP42Q9H9J4 1324 aaKnown RBP24.01■■□□□ 1.43
TNFAIP2-206ENST00000560428 YBX3P16989 372 aaKnown RBP eCLIP24■■□□□ 1.43
TNFAIP2-206ENST00000560428 ZNF790Q6PG37 636 aa24■■□□□ 1.43
TNFAIP2-206ENST00000560428 SOS1Q07889 1333 aaPredicted RBP23.99■■□□□ 1.43
TNFAIP2-206ENST00000560428 C10orf71Q711Q0 1435 aa23.98■■□□□ 1.43
TNFAIP2-206ENST00000560428 HEG1Q9ULI3 1381 aa23.97■■□□□ 1.43
TNFAIP2-206ENST00000560428 HTATSF1O43719 755 aaKnown RBP23.96■■□□□ 1.43
TNFAIP2-206ENST00000560428 RALBP1Q15311 655 aa23.96■■□□□ 1.43
TNFAIP2-206ENST00000560428 RTF1Q92541 710 aaKnown RBP23.96■■□□□ 1.43
TNFAIP2-206ENST00000560428 ZNF496Q96IT1 587 aaPredicted RBP23.96■■□□□ 1.43
TNFAIP2-206ENST00000560428 TEX13AQ9BXU3 409 aaPredicted RBP23.96■■□□□ 1.43
TNFAIP2-206ENST00000560428 SRP68Q9UHB9 627 aaKnown RBP23.96■■□□□ 1.43
TNFAIP2-206ENST00000560428 PARP3Q9Y6F1 533 aa23.96■■□□□ 1.43
TNFAIP2-206ENST00000560428 KIAA1551Q9HCM1 1747 aa23.96■■□□□ 1.43
TNFAIP2-206ENST00000560428 COL15A1P39059 1388 aa23.95■■□□□ 1.42
TNFAIP2-206ENST00000560428 STARD3NLO95772 234 aa23.95■■□□□ 1.42
TNFAIP2-206ENST00000560428 ZBTB1Q9Y2K1 713 aa23.95■■□□□ 1.42
TNFAIP2-206ENST00000560428 ZPR1O75312 459 aa23.94■■□□□ 1.42
TNFAIP2-206ENST00000560428 TGFB2P61812 414 aa23.94■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms