RNA–Protein interactions for RNA: ENST00000560357.5

HMBOX1-214, Transcript of homeobox containing 1, humanhuman

TSL 2

Gene HMBOX1, Length 979 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-214ENST00000560357 SPATA31A5Q5VU36 1347 aa9.4□□□□□ -0.9
HMBOX1-214ENST00000560357 SPATA31A7Q8IWB4 1347 aa9.4□□□□□ -0.9
HMBOX1-214ENST00000560357 RNMTO43148 476 aaKnown RBP9.4□□□□□ -0.9
HMBOX1-214ENST00000560357 PHKG2P15735 406 aa9.4□□□□□ -0.9
HMBOX1-214ENST00000560357 EXOSC9Q06265 439 aaKnown RBP9.4□□□□□ -0.9
HMBOX1-214ENST00000560357 MPRIPQ6WCQ1 1025 aa9.4□□□□□ -0.9
HMBOX1-214ENST00000560357 IFNL2Q8IZJ0 200 aa9.4□□□□□ -0.9
HMBOX1-214ENST00000560357 ZCRB1Q8TBF4 217 aaKnown RBP9.4□□□□□ -0.9
HMBOX1-214ENST00000560357 MBIPQ9NS73 344 aa9.4□□□□□ -0.9
HMBOX1-214ENST00000560357 LRRC37A3O60309 1634 aa9.4□□□□□ -0.9
HMBOX1-214ENST00000560357 VIRMAQ69YN4 1812 aaKnown RBP9.4□□□□□ -0.91
HMBOX1-214ENST00000560357 ADAMTS7Q9UKP4 1686 aa9.39□□□□□ -0.91
HMBOX1-214ENST00000560357 RNF123Q5XPI4 1314 aa9.39□□□□□ -0.91
HMBOX1-214ENST00000560357 TAF7Q15545 349 aaPredicted RBP9.39□□□□□ -0.91
HMBOX1-214ENST00000560357 THRAP3Q9Y2W1 955 aaKnown RBP9.39□□□□□ -0.91
HMBOX1-214ENST00000560357 SCN11AQ9UI33 1791 aa9.38□□□□□ -0.91
HMBOX1-214ENST00000560357 HSP90AB1P08238 724 aaKnown RBP9.38□□□□□ -0.91
HMBOX1-214ENST00000560357 VPS72Q15906 364 aa9.38□□□□□ -0.91
HMBOX1-214ENST00000560357 MEX3CQ5U5Q3 659 aaKnown RBP9.38□□□□□ -0.91
HMBOX1-214ENST00000560357 PROM2Q8N271 834 aa9.38□□□□□ -0.91
HMBOX1-214ENST00000560357 BABAM1Q9NWV8 329 aa9.38□□□□□ -0.91
HMBOX1-214ENST00000560357 MIS18AQ9NYP9 233 aa9.38□□□□□ -0.91
HMBOX1-214ENST00000560357 USP21Q9UK80 565 aa9.38□□□□□ -0.91
HMBOX1-214ENST00000560357 SHANK3Q9BYB0 1731 aa9.38□□□□□ -0.91
HMBOX1-214ENST00000560357 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.38□□□□□ -0.91
HMBOX1-214ENST00000560357 WNK3Q9BYP7 1800 aa9.38□□□□□ -0.91
HMBOX1-214ENST00000560357 PCDH11XQ9BZA7 1347 aa9.37□□□□□ -0.91
HMBOX1-214ENST00000560357 PCDH11YQ9BZA8 1340 aa9.37□□□□□ -0.91
HMBOX1-214ENST00000560357 CT47B1P0C2W7 299 aaPredicted RBP9.37□□□□□ -0.91
HMBOX1-214ENST00000560357 NKX1-1Q15270 411 aaPredicted RBP9.37□□□□□ -0.91
HMBOX1-214ENST00000560357 BARGINQ6ZT62 677 aa9.37□□□□□ -0.91
HMBOX1-214ENST00000560357 FBXO41Q8TF61 875 aa9.37□□□□□ -0.91
HMBOX1-214ENST00000560357 DCAF5Q96JK2 942 aa9.37□□□□□ -0.91
HMBOX1-214ENST00000560357 CDCA7Q9BWT1 371 aaPredicted RBP9.37□□□□□ -0.91
HMBOX1-214ENST00000560357 TSPYL4Q9UJ04 414 aa9.37□□□□□ -0.91
HMBOX1-214ENST00000560357 CCDC9Q9Y3X0 531 aaKnown RBP9.37□□□□□ -0.91
HMBOX1-214ENST00000560357 KDM6AO15550 1401 aaPredicted RBP9.37□□□□□ -0.91
HMBOX1-214ENST00000560357 AFF2P51816 1311 aa9.36□□□□□ -0.91
HMBOX1-214ENST00000560357 EXOC5O00471 708 aa9.36□□□□□ -0.91
HMBOX1-214ENST00000560357 RARSP54136 660 aaKnown RBP9.36□□□□□ -0.91
HMBOX1-214ENST00000560357 TEFQ10587 303 aa9.36□□□□□ -0.91
HMBOX1-214ENST00000560357 TSPYL6Q8N831 410 aa9.36□□□□□ -0.91
HMBOX1-214ENST00000560357 C8orf58Q8NAV2 365 aa9.36□□□□□ -0.91
HMBOX1-214ENST00000560357 DDX54Q8TDD1 881 aaKnown RBP9.36□□□□□ -0.91
HMBOX1-214ENST00000560357 CREBZFQ9NS37 354 aa9.36□□□□□ -0.91
HMBOX1-214ENST00000560357 SIPA1L3O60292 1781 aaPredicted RBP9.36□□□□□ -0.91
HMBOX1-214ENST00000560357 VAMP4O75379 141 aa9.35□□□□□ -0.91
HMBOX1-214ENST00000560357 SLC52A2Q9HAB3 445 aa9.35□□□□□ -0.91
HMBOX1-214ENST00000560357 GTF3C3Q9Y5Q9 886 aa9.35□□□□□ -0.91
HMBOX1-214ENST00000560357 TNS2Q63HR2 1409 aa9.34□□□□□ -0.91
HMBOX1-214ENST00000560357 ELL2O00472 640 aaPredicted RBP9.34□□□□□ -0.91
HMBOX1-214ENST00000560357 BCAR3O75815 825 aa9.34□□□□□ -0.91
HMBOX1-214ENST00000560357 RRP1P56182 461 aaKnown RBP9.34□□□□□ -0.91
HMBOX1-214ENST00000560357 KRT24Q2M2I5 525 aa9.34□□□□□ -0.91
HMBOX1-214ENST00000560357 TWISTNBQ3B726 338 aaPredicted RBP9.34□□□□□ -0.91
HMBOX1-214ENST00000560357 NFATC2IPQ8NCF5 419 aa9.34□□□□□ -0.91
HMBOX1-214ENST00000560357 KDM3BQ7LBC6 1761 aa9.34□□□□□ -0.91
HMBOX1-214ENST00000560357 MRC1P22897 1456 aa9.34□□□□□ -0.91
HMBOX1-214ENST00000560357 ATRNO75882 1429 aa9.33□□□□□ -0.92
HMBOX1-214ENST00000560357 BTBD11A6QL63 1104 aa9.33□□□□□ -0.92
HMBOX1-214ENST00000560357 ERVV-2B6SEH9 535 aa9.33□□□□□ -0.92
HMBOX1-214ENST00000560357 KCNQ3O43525 872 aa9.33□□□□□ -0.92
HMBOX1-214ENST00000560357 NEFLP07196 543 aa9.33□□□□□ -0.92
HMBOX1-214ENST00000560357 CABP4P57796 275 aa9.33□□□□□ -0.92
HMBOX1-214ENST00000560357 EIF4A1P60842 406 aaKnown RBP9.33□□□□□ -0.92
HMBOX1-214ENST00000560357 DDB1Q16531 1140 aa9.33□□□□□ -0.92
HMBOX1-214ENST00000560357 FAM98CQ17RN3 349 aaKnown RBP9.33□□□□□ -0.92
HMBOX1-214ENST00000560357 SSH1Q8WYL5 1049 aa9.33□□□□□ -0.92
HMBOX1-214ENST00000560357 ZNF428Q96B54 188 aa9.33□□□□□ -0.92
HMBOX1-214ENST00000560357 GJD4Q96KN9 370 aaPredicted RBP9.33□□□□□ -0.92
HMBOX1-214ENST00000560357 TRPC5Q9UL62 973 aaPredicted RBP9.33□□□□□ -0.92
HMBOX1-214ENST00000560357 PLIN1O60240 522 aa9.32□□□□□ -0.92
HMBOX1-214ENST00000560357 GABBR2O75899 941 aa9.32□□□□□ -0.92
HMBOX1-214ENST00000560357 CLCN6P51797 869 aa9.32□□□□□ -0.92
HMBOX1-214ENST00000560357 IRX6P78412 446 aaPredicted RBP9.32□□□□□ -0.92
HMBOX1-214ENST00000560357 FKBP8Q14318 412 aa9.32□□□□□ -0.92
HMBOX1-214ENST00000560357 ALDH1L2Q3SY69 923 aa9.32□□□□□ -0.92
HMBOX1-214ENST00000560357 GLI3P10071 1580 aa9.32□□□□□ -0.92
HMBOX1-214ENST00000560357 TOGARAM1Q9Y4F4 1720 aa9.31□□□□□ -0.92
HMBOX1-214ENST00000560357 ONECUT3O60422 494 aaPredicted RBP9.31□□□□□ -0.92
HMBOX1-214ENST00000560357 CD44P16070 742 aaKnown RBP9.31□□□□□ -0.92
HMBOX1-214ENST00000560357 BRPF1P55201 1214 aaPredicted RBP9.31□□□□□ -0.92
HMBOX1-214ENST00000560357 ZNF790Q6PG37 636 aa9.31□□□□□ -0.92
HMBOX1-214ENST00000560357 MARCH10Q8NA82 808 aaPredicted RBP9.31□□□□□ -0.92
HMBOX1-214ENST00000560357 BCL2L13Q9BXK5 485 aa9.31□□□□□ -0.92
HMBOX1-214ENST00000560357 QTRT2Q9H974 415 aaKnown RBP9.31□□□□□ -0.92
HMBOX1-214ENST00000560357 HEG1Q9ULI3 1381 aa9.31□□□□□ -0.92
HMBOX1-214ENST00000560357 SOS1Q07889 1333 aaPredicted RBP9.31□□□□□ -0.92
HMBOX1-214ENST00000560357 THSD7AQ9UPZ6 1657 aa9.3□□□□□ -0.92
HMBOX1-214ENST00000560357 SLC39A6Q13433 755 aa9.3□□□□□ -0.92
HMBOX1-214ENST00000560357 MRPL50Q8N5N7 158 aaKnown RBP9.3□□□□□ -0.92
HMBOX1-214ENST00000560357 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.3□□□□□ -0.92
HMBOX1-214ENST00000560357 SMC4Q9NTJ3 1288 aa9.3□□□□□ -0.92
HMBOX1-214ENST00000560357 ITGB4P16144 1822 aa9.3□□□□□ -0.92
HMBOX1-214ENST00000560357 TCERG1O14776 1098 aaKnown RBP9.29□□□□□ -0.92
HMBOX1-214ENST00000560357 HOXB7P09629 217 aa9.29□□□□□ -0.92
HMBOX1-214ENST00000560357 C20orf194Q5TEA3 1177 aa9.29□□□□□ -0.92
HMBOX1-214ENST00000560357 PIGBQ92521 554 aa9.29□□□□□ -0.92
HMBOX1-214ENST00000560357 KAT6BQ8WYB5 2073 aa9.28□□□□□ -0.92
HMBOX1-214ENST00000560357 GIGYF1O75420 1035 aaPredicted RBP9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms