RNA–Protein interactions for RNA: ENST00000558961.1

BMP4-204, Transcript of bone morphogenetic protein 4, humanhuman

TSL 3

Gene BMP4, Length 495 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BMP4-204ENST00000558961 ASAP1Q9ULH1 1129 aa15.15■□□□□ 0.02
BMP4-204ENST00000558961 UBR2Q8IWV8 1755 aa15.15■□□□□ 0.02
BMP4-204ENST00000558961 PPP2R1AP30153 589 aa15.14■□□□□ 0.01
BMP4-204ENST00000558961 AKAP4Q5JQC9 854 aa15.14■□□□□ 0.01
BMP4-204ENST00000558961 MAP3K5Q99683 1374 aa15.13■□□□□ 0.01
BMP4-204ENST00000558961 PPP1R1BQ9UD71 204 aaPredicted RBP15.13■□□□□ 0.01
BMP4-204ENST00000558961 ATF5Q9Y2D1 282 aaPredicted RBP15.13■□□□□ 0.01
BMP4-204ENST00000558961 CFAP53Q96M91 514 aa15.12■□□□□ 0.01
BMP4-204ENST00000558961 C4AP0C0L4 1744 aa15.12■□□□□ 0.01
BMP4-204ENST00000558961 CABP4P57796 275 aa15.11■□□□□ 0.01
BMP4-204ENST00000558961 ITPK1Q13572 414 aa15.11■□□□□ 0.01
BMP4-204ENST00000558961 CNGB1Q14028 1251 aaPredicted RBP15.11■□□□□ 0.01
BMP4-204ENST00000558961 MTHFSDQ2M296 383 aaKnown RBP15.11■□□□□ 0.01
BMP4-204ENST00000558961 LINC00116Q8NCU8 138 aa15.11■□□□□ 0.01
BMP4-204ENST00000558961 FLAD1Q8NFF5 587 aa15.11■□□□□ 0.01
BMP4-204ENST00000558961 MYH14Q7Z406 1995 aaKnown RBP15.11■□□□□ 0.01
BMP4-204ENST00000558961 COL23A1Q86Y22 540 aaPredicted RBP15.1■□□□□ 0.01
BMP4-204ENST00000558961 SLC4A9Q96Q91 983 aa15.1■□□□□ 0.01
BMP4-204ENST00000558961 KCPQ6ZWJ8 1503 aa15.1■□□□□ 0.01
BMP4-204ENST00000558961 U2SURPO15042 1029 aaKnown RBP15.09■□□□□ 0.01
BMP4-204ENST00000558961 AK7Q96M32 723 aa15.09■□□□□ 0.01
BMP4-204ENST00000558961 RSPH6AQ9H0K4 717 aa15.09■□□□□ 0.01
BMP4-204ENST00000558961 RNMTO43148 476 aaKnown RBP15.08■□□□□ 0
BMP4-204ENST00000558961 SSFA2P28290 1259 aa15.08■□□□□ 0
BMP4-204ENST00000558961 ATP6V1AP38606 617 aa15.08■□□□□ 0
BMP4-204ENST00000558961 AMIGO3Q86WK7 504 aa15.08■□□□□ 0
BMP4-204ENST00000558961 NFATC2IPQ8NCF5 419 aa15.08■□□□□ 0
BMP4-204ENST00000558961 SLC52A2Q9HAB3 445 aa15.08■□□□□ 0
BMP4-204ENST00000558961 GAS2L2Q8NHY3 880 aa15.07■□□□□ 0
BMP4-204ENST00000558961 ARXQ96QS3 562 aa15.07■□□□□ 0
BMP4-204ENST00000558961 FHDC1Q9C0D6 1143 aaPredicted RBP15.07■□□□□ 0
BMP4-204ENST00000558961 LGR6Q9HBX8 967 aa15.07■□□□□ 0
BMP4-204ENST00000558961 NUDCQ9Y266 331 aa15.07■□□□□ 0
BMP4-204ENST00000558961 CNTNAP4Q9C0A0 1308 aa15.07■□□□□ 0
BMP4-204ENST00000558961 CEMIPQ8WUJ3 1361 aa15.06■□□□□ 0
BMP4-204ENST00000558961 DLG5Q8TDM6 1919 aa15.05■□□□□ 0
BMP4-204ENST00000558961 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.05■□□□□ -0
BMP4-204ENST00000558961 POLD1P28340 1107 aa15.05■□□□□ -0
BMP4-204ENST00000558961 PRKAR2BP31323 418 aa15.05■□□□□ -0
BMP4-204ENST00000558961 RC3H1Q5TC82 1133 aaKnown RBP15.05■□□□□ -0
BMP4-204ENST00000558961 SYT17Q9BSW7 474 aa15.05■□□□□ -0
BMP4-204ENST00000558961 GNPATO15228 680 aa15.04■□□□□ -0
BMP4-204ENST00000558961 FCHSD2O94868 740 aa15.04■□□□□ -0
BMP4-204ENST00000558961 RBM42Q9BTD8 480 aaKnown RBP15.04■□□□□ -0
BMP4-204ENST00000558961 KIF13BQ9NQT8 1826 aa15.03■□□□□ -0
BMP4-204ENST00000558961 GNAT3A8MTJ3 354 aa15.03■□□□□ -0
BMP4-204ENST00000558961 PHACTR3Q96KR7 559 aa15.03■□□□□ -0
BMP4-204ENST00000558961 MSH5O43196 834 aa15.02■□□□□ -0
BMP4-204ENST00000558961 PTCD1O75127 700 aaKnown RBP15.02■□□□□ -0
BMP4-204ENST00000558961 U2AF1L5P0DN76 240 aaPredicted RBP15.02■□□□□ -0
BMP4-204ENST00000558961 ADRA2BP18089 450 aa15.02■□□□□ -0
BMP4-204ENST00000558961 U2AF1Q01081 240 aaKnown RBP eCLIP15.02■□□□□ -0
BMP4-204ENST00000558961 RALBP1Q15311 655 aa15.02■□□□□ -0
BMP4-204ENST00000558961 IL17REQ8NFR9 667 aa15.02■□□□□ -0
BMP4-204ENST00000558961 PHF14O94880 888 aa15.01□□□□□ -0.01
BMP4-204ENST00000558961 RTCBQ9Y3I0 505 aaKnown RBP15.01□□□□□ -0.01
BMP4-204ENST00000558961 RPS6KA4O75676 772 aa15□□□□□ -0.01
BMP4-204ENST00000558961 DDX10Q13206 875 aaKnown RBP15□□□□□ -0.01
BMP4-204ENST00000558961 MSL1Q68DK7 614 aa15□□□□□ -0.01
BMP4-204ENST00000558961 SMIM5Q71RC9 77 aa15□□□□□ -0.01
BMP4-204ENST00000558961 CRKLP46109 303 aaKnown RBP14.99□□□□□ -0.01
BMP4-204ENST00000558961 VSIG10Q8N0Z9 540 aa14.99□□□□□ -0.01
BMP4-204ENST00000558961 KIAA1551Q9HCM1 1747 aa14.99□□□□□ -0.01
BMP4-204ENST00000558961 CHD4Q14839 1912 aa14.98□□□□□ -0.01
BMP4-204ENST00000558961 TEFQ10587 303 aa14.98□□□□□ -0.01
BMP4-204ENST00000558961 SLC39A6Q13433 755 aa14.98□□□□□ -0.01
BMP4-204ENST00000558961 KDM3BQ7LBC6 1761 aa14.98□□□□□ -0.01
BMP4-204ENST00000558961 MYBBP1AQ9BQG0 1328 aaKnown RBP14.97□□□□□ -0.01
BMP4-204ENST00000558961 HTATSF1O43719 755 aaKnown RBP14.97□□□□□ -0.01
BMP4-204ENST00000558961 DIEXFQ68CQ4 756 aaKnown RBP14.97□□□□□ -0.01
BMP4-204ENST00000558961 INTS5Q6P9B9 1019 aaKnown RBP14.97□□□□□ -0.01
BMP4-204ENST00000558961 ARHGEF1Q92888 912 aaKnown RBP14.97□□□□□ -0.01
BMP4-204ENST00000558961 PLEKHF1Q96S99 279 aa14.97□□□□□ -0.01
BMP4-204ENST00000558961 SCN7AQ01118 1682 aa14.97□□□□□ -0.01
BMP4-204ENST00000558961 LAMB4A4D0S4 1761 aa14.96□□□□□ -0.01
BMP4-204ENST00000558961 CYP19A1P11511 503 aaPredicted RBP14.96□□□□□ -0.01
BMP4-204ENST00000558961 TRAPPC3LQ5T215 181 aa14.96□□□□□ -0.01
BMP4-204ENST00000558961 ZNF790Q6PG37 636 aa14.96□□□□□ -0.01
BMP4-204ENST00000558961 DNAJC10Q8IXB1 793 aa14.96□□□□□ -0.01
BMP4-204ENST00000558961 HEG1Q9ULI3 1381 aa14.96□□□□□ -0.02
BMP4-204ENST00000558961 DCAF8L1A6NGE4 600 aa14.95□□□□□ -0.02
BMP4-204ENST00000558961 CCDC87Q9NVE4 849 aa14.95□□□□□ -0.02
BMP4-204ENST00000558961 CD2APQ9Y5K6 639 aa14.95□□□□□ -0.02
BMP4-204ENST00000558961 SOS1Q07889 1333 aaPredicted RBP14.94□□□□□ -0.02
BMP4-204ENST00000558961 USP42Q9H9J4 1324 aaKnown RBP14.94□□□□□ -0.02
BMP4-204ENST00000558961 GYS1P13807 737 aa14.94□□□□□ -0.02
BMP4-204ENST00000558961 TTC5Q8N0Z6 440 aa14.94□□□□□ -0.02
BMP4-204ENST00000558961 NLGN2Q8NFZ4 835 aa14.94□□□□□ -0.02
BMP4-204ENST00000558961 ZNF496Q96IT1 587 aaPredicted RBP14.94□□□□□ -0.02
BMP4-204ENST00000558961 BRCA1P38398 1863 aaKnown RBP14.94□□□□□ -0.02
BMP4-204ENST00000558961 NRXN2Q9P2S2 1712 aa14.94□□□□□ -0.02
BMP4-204ENST00000558961 BCORQ6W2J9 1755 aa14.93□□□□□ -0.02
BMP4-204ENST00000558961 C10orf71Q711Q0 1435 aa14.93□□□□□ -0.02
BMP4-204ENST00000558961 RFC4P35249 363 aa14.93□□□□□ -0.02
BMP4-204ENST00000558961 NLGN1Q8N2Q7 840 aa14.93□□□□□ -0.02
BMP4-204ENST00000558961 RTF1Q92541 710 aaKnown RBP14.93□□□□□ -0.02
BMP4-204ENST00000558961 COL15A1P39059 1388 aa14.93□□□□□ -0.02
BMP4-204ENST00000558961 MCM10Q7L590 875 aa14.92□□□□□ -0.02
BMP4-204ENST00000558961 PNNQ9H307 717 aaKnown RBP14.92□□□□□ -0.02
BMP4-204ENST00000558961 PRKRIP1Q9H875 184 aaPredicted RBP14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms