RNA–Protein interactions for RNA: ENST00000558639.5

PSMA4-208, Transcript of proteasome subunit alpha 4, humanhuman

TSL 3

Gene PSMA4, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA4-208ENST00000558639 USB1Q9BQ65 265 aaKnown RBP11.29□□□□□ -0.6
PSMA4-208ENST00000558639 SLAIN2Q9P270 581 aa11.29□□□□□ -0.6
PSMA4-208ENST00000558639 ADGRL2O95490 1459 aa11.29□□□□□ -0.6
PSMA4-208ENST00000558639 NUP155O75694 1391 aa11.28□□□□□ -0.6
PSMA4-208ENST00000558639 MSH6P52701 1360 aa11.28□□□□□ -0.6
PSMA4-208ENST00000558639 SYNMO15061 1565 aa11.28□□□□□ -0.6
PSMA4-208ENST00000558639 RIMS2Q9UQ26 1411 aa11.28□□□□□ -0.6
PSMA4-208ENST00000558639 ZNF326Q5BKZ1 582 aaKnown RBP11.28□□□□□ -0.6
PSMA4-208ENST00000558639 DESI1Q6ICB0 168 aa11.28□□□□□ -0.6
PSMA4-208ENST00000558639 C1orf115Q9H7X2 142 aa11.28□□□□□ -0.6
PSMA4-208ENST00000558639 TBC1D2BQ9UPU7 963 aa11.28□□□□□ -0.6
PSMA4-208ENST00000558639 TBX22Q9Y458 520 aa11.28□□□□□ -0.6
PSMA4-208ENST00000558639 FAM135BQ49AJ0 1406 aa11.27□□□□□ -0.6
PSMA4-208ENST00000558639 BLOC1S3Q6QNY0 202 aa11.27□□□□□ -0.61
PSMA4-208ENST00000558639 LRRN4Q8WUT4 740 aa11.27□□□□□ -0.61
PSMA4-208ENST00000558639 TET3O43151 1660 aa11.27□□□□□ -0.61
PSMA4-208ENST00000558639 BRICD5Q6PL45 260 aa11.26□□□□□ -0.61
PSMA4-208ENST00000558639 RNF19BQ6ZMZ0 732 aa11.26□□□□□ -0.61
PSMA4-208ENST00000558639 NYAP1Q6ZVC0 841 aa11.26□□□□□ -0.61
PSMA4-208ENST00000558639 GJD4Q96KN9 370 aaPredicted RBP11.26□□□□□ -0.61
PSMA4-208ENST00000558639 HMX1Q9NP08 348 aaPredicted RBP11.26□□□□□ -0.61
PSMA4-208ENST00000558639 RGS17Q9UGC6 210 aaPredicted RBP11.26□□□□□ -0.61
PSMA4-208ENST00000558639 XIRP1Q702N8 1843 aaKnown RBP11.25□□□□□ -0.61
PSMA4-208ENST00000558639 RPRD2Q5VT52 1461 aaKnown RBP11.25□□□□□ -0.61
PSMA4-208ENST00000558639 ADGRB3O60242 1522 aa11.25□□□□□ -0.61
PSMA4-208ENST00000558639 ATF3P18847 181 aa11.25□□□□□ -0.61
PSMA4-208ENST00000558639 CDAN1Q8IWY9 1227 aa11.25□□□□□ -0.61
PSMA4-208ENST00000558639 AMOTL2Q9Y2J4 779 aa11.25□□□□□ -0.61
PSMA4-208ENST00000558639 PLEKHG1Q9ULL1 1385 aa11.25□□□□□ -0.61
PSMA4-208ENST00000558639 KDM5AP29375 1690 aaKnown RBP11.24□□□□□ -0.61
PSMA4-208ENST00000558639 PNMA1Q8ND90 353 aa11.23□□□□□ -0.61
PSMA4-208ENST00000558639 TRIM52Q96A61 297 aa11.23□□□□□ -0.61
PSMA4-208ENST00000558639 ROCK1Q13464 1354 aa11.23□□□□□ -0.61
PSMA4-208ENST00000558639 MYO5BQ9ULV0 1848 aa11.23□□□□□ -0.61
PSMA4-208ENST00000558639 COPS2P61201 443 aa11.22□□□□□ -0.61
PSMA4-208ENST00000558639 MEX3CQ5U5Q3 659 aaKnown RBP11.22□□□□□ -0.61
PSMA4-208ENST00000558639 POTEAQ6S8J7 498 aa11.22□□□□□ -0.61
PSMA4-208ENST00000558639 TRIM34Q9BYJ4 488 aa11.22□□□□□ -0.61
PSMA4-208ENST00000558639 C19orf44Q9H6X5 657 aa11.22□□□□□ -0.61
PSMA4-208ENST00000558639 GCC2Q8IWJ2 1684 aa11.21□□□□□ -0.61
PSMA4-208ENST00000558639 ZFYVE9O95405 1425 aa11.21□□□□□ -0.61
PSMA4-208ENST00000558639 PER1O15534 1290 aaPredicted RBP11.21□□□□□ -0.61
PSMA4-208ENST00000558639 WASHC4Q2M389 1173 aa11.21□□□□□ -0.61
PSMA4-208ENST00000558639 LYPD8Q6UX82 237 aa11.21□□□□□ -0.61
PSMA4-208ENST00000558639 CCDC82Q8N4S0 544 aa11.21□□□□□ -0.61
PSMA4-208ENST00000558639 THAP11Q96EK4 314 aa11.21□□□□□ -0.61
PSMA4-208ENST00000558639 CCDC97Q96F63 343 aaPredicted RBP11.21□□□□□ -0.61
PSMA4-208ENST00000558639 ROBO1Q9Y6N7 1651 aa11.2□□□□□ -0.62
PSMA4-208ENST00000558639 TMEM131LA2VDJ0 1609 aa11.2□□□□□ -0.62
PSMA4-208ENST00000558639 NR6A1Q15406 480 aa11.2□□□□□ -0.62
PSMA4-208ENST00000558639 SPSB2Q99619 263 aa11.2□□□□□ -0.62
PSMA4-208ENST00000558639 NKTRP30414 1462 aaKnown RBP11.19□□□□□ -0.62
PSMA4-208ENST00000558639 PTPN5P54829 565 aa11.19□□□□□ -0.62
PSMA4-208ENST00000558639 SERPINA10Q9UK55 444 aa11.19□□□□□ -0.62
PSMA4-208ENST00000558639 E9PCH4 1651 aa11.19□□□□□ -0.62
PSMA4-208ENST00000558639 CHD2O14647 1828 aaKnown RBP11.19□□□□□ -0.62
PSMA4-208ENST00000558639 JUNDP17535 347 aa11.18□□□□□ -0.62
PSMA4-208ENST00000558639 UNC13BO14795 1591 aa11.18□□□□□ -0.62
PSMA4-208ENST00000558639 ADAMTS13Q76LX8 1427 aa11.18□□□□□ -0.62
PSMA4-208ENST00000558639 JCADQ9P266 1359 aa11.17□□□□□ -0.62
PSMA4-208ENST00000558639 MSS51Q4VC12 460 aa11.17□□□□□ -0.62
PSMA4-208ENST00000558639 EPS8L1Q8TE68 723 aa11.17□□□□□ -0.62
PSMA4-208ENST00000558639 PHLPP1O60346 1717 aa11.16□□□□□ -0.62
PSMA4-208ENST00000558639 PTPRNQ16849 979 aa11.16□□□□□ -0.62
PSMA4-208ENST00000558639 CALR3Q96L12 384 aaKnown RBP11.16□□□□□ -0.62
PSMA4-208ENST00000558639 NWD1Q149M9 1564 aa11.16□□□□□ -0.62
PSMA4-208ENST00000558639 PIK3R4Q99570 1358 aa11.16□□□□□ -0.62
PSMA4-208ENST00000558639 IRF5Q13568 498 aa11.15□□□□□ -0.62
PSMA4-208ENST00000558639 IQGAP3Q86VI3 1631 aa11.15□□□□□ -0.62
PSMA4-208ENST00000558639 NCOA3Q9Y6Q9 1424 aa11.15□□□□□ -0.62
PSMA4-208ENST00000558639 ZPR1O75312 459 aa11.14□□□□□ -0.63
PSMA4-208ENST00000558639 BRINP3Q76B58 766 aa11.14□□□□□ -0.63
PSMA4-208ENST00000558639 MTRQ99707 1265 aa11.14□□□□□ -0.63
PSMA4-208ENST00000558639 PTPRUQ92729 1446 aa11.14□□□□□ -0.63
PSMA4-208ENST00000558639 CTHP32929 405 aa11.13□□□□□ -0.63
PSMA4-208ENST00000558639 ZNF772Q68DY9 489 aaPredicted RBP11.13□□□□□ -0.63
PSMA4-208ENST00000558639 GLMNQ92990 594 aa11.13□□□□□ -0.63
PSMA4-208ENST00000558639 SPATA31A6Q5VVP1 1343 aa11.12□□□□□ -0.63
PSMA4-208ENST00000558639 POM121CA8CG34 1229 aa11.12□□□□□ -0.63
PSMA4-208ENST00000558639 ADH1BP00325 375 aa11.12□□□□□ -0.63
PSMA4-208ENST00000558639 FAM160A2Q8N612 972 aaPredicted RBP11.12□□□□□ -0.63
PSMA4-208ENST00000558639 DDX17Q92841 729 aaKnown RBP11.12□□□□□ -0.63
PSMA4-208ENST00000558639 IL21Q9HBE4 155 aa11.12□□□□□ -0.63
PSMA4-208ENST00000558639 TRPM2O94759 1503 aa11.12□□□□□ -0.63
PSMA4-208ENST00000558639 METP08581 1390 aa11.12□□□□□ -0.63
PSMA4-208ENST00000558639 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.12□□□□□ -0.63
PSMA4-208ENST00000558639 DXOO77932 396 aaKnown RBP11.11□□□□□ -0.63
PSMA4-208ENST00000558639 CCNYL3P0C7X3 344 aa11.11□□□□□ -0.63
PSMA4-208ENST00000558639 LRRC59Q96AG4 307 aaKnown RBP11.11□□□□□ -0.63
PSMA4-208ENST00000558639 PCDH10Q9P2E7 1040 aa11.11□□□□□ -0.63
PSMA4-208ENST00000558639 F12P00748 615 aaPredicted RBP11.1□□□□□ -0.63
PSMA4-208ENST00000558639 RXRBP28702 533 aa11.1□□□□□ -0.63
PSMA4-208ENST00000558639 MMP16P51512 607 aa11.1□□□□□ -0.63
PSMA4-208ENST00000558639 VAC14Q08AM6 782 aa11.1□□□□□ -0.63
PSMA4-208ENST00000558639 RGL3Q3MIN7 710 aa11.1□□□□□ -0.63
PSMA4-208ENST00000558639 NUDT12Q9BQG2 462 aa11.1□□□□□ -0.63
PSMA4-208ENST00000558639 DIP2AQ14689 1571 aa11.09□□□□□ -0.63
PSMA4-208ENST00000558639 TLL1O43897 1013 aa11.09□□□□□ -0.63
PSMA4-208ENST00000558639 GPR37L1O60883 481 aa11.09□□□□□ -0.63
PSMA4-208ENST00000558639 HDGFL1Q5TGJ6 251 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms