RNA–Protein interactions for RNA: ENST00000558016.1

IDH3A-204, Transcript of isocitrate dehydrogenase 3 (NAD(+)) alpha, humanhuman

TSL 2

Gene IDH3A, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3A-204ENST00000558016 SIN3AQ96ST3 1273 aa8.95□□□□□ -0.98
IDH3A-204ENST00000558016 RBM27Q9P2N5 1060 aaKnown RBP8.95□□□□□ -0.98
IDH3A-204ENST00000558016 ATAD2Q6PL18 1390 aa8.95□□□□□ -0.98
IDH3A-204ENST00000558016 QRICH2Q9H0J4 1663 aa8.94□□□□□ -0.98
IDH3A-204ENST00000558016 RGPD8O14715 1765 aaPredicted RBP8.94□□□□□ -0.98
IDH3A-204ENST00000558016 RNF40O75150 1001 aa8.94□□□□□ -0.98
IDH3A-204ENST00000558016 ITGBL1O95965 494 aaPredicted RBP8.94□□□□□ -0.98
IDH3A-204ENST00000558016 TRIM26Q12899 539 aaPredicted RBP8.94□□□□□ -0.98
IDH3A-204ENST00000558016 L3MBTL2Q969R5 705 aa8.94□□□□□ -0.98
IDH3A-204ENST00000558016 NUDT16Q96DE0 195 aaKnown RBP8.94□□□□□ -0.98
IDH3A-204ENST00000558016 PRR36Q9H6K5 1346 aa8.94□□□□□ -0.98
IDH3A-204ENST00000558016 NBPF1Q3BBV0 1214 aa8.93□□□□□ -0.98
IDH3A-204ENST00000558016 TTC13Q8NBP0 860 aa8.93□□□□□ -0.98
IDH3A-204ENST00000558016 CDK19Q9BWU1 502 aa8.93□□□□□ -0.98
IDH3A-204ENST00000558016 ATRNO75882 1429 aa8.93□□□□□ -0.98
IDH3A-204ENST00000558016 MARF1Q9Y4F3 1742 aaKnown RBP8.93□□□□□ -0.98
IDH3A-204ENST00000558016 ABCA3Q99758 1704 aa8.92□□□□□ -0.98
IDH3A-204ENST00000558016 PPIP5K1Q6PFW1 1433 aa8.92□□□□□ -0.98
IDH3A-204ENST00000558016 ZBTB7CA1YPR0 619 aa8.92□□□□□ -0.98
IDH3A-204ENST00000558016 SEMA3EO15041 775 aa8.92□□□□□ -0.98
IDH3A-204ENST00000558016 KCNC4Q03721 635 aa8.92□□□□□ -0.98
IDH3A-204ENST00000558016 PRDM11Q9NQV5 511 aa8.92□□□□□ -0.98
IDH3A-204ENST00000558016 PLCH1Q4KWH8 1693 aa8.91□□□□□ -0.98
IDH3A-204ENST00000558016 TRPM1Q7Z4N2 1603 aa8.91□□□□□ -0.98
IDH3A-204ENST00000558016 EVC2Q86UK5 1308 aa8.91□□□□□ -0.98
IDH3A-204ENST00000558016 NUTM2GQ5VZR2 741 aa8.91□□□□□ -0.98
IDH3A-204ENST00000558016 UNC5CLQ8IV45 518 aa8.91□□□□□ -0.98
IDH3A-204ENST00000558016 FNBP4Q8N3X1 1017 aaPredicted RBP8.91□□□□□ -0.98
IDH3A-204ENST00000558016 TRPM3Q9HCF6 1732 aaPredicted RBP8.91□□□□□ -0.98
IDH3A-204ENST00000558016 TOPAZ1Q8N9V7 1692 aa8.91□□□□□ -0.98
IDH3A-204ENST00000558016 RALGAPBQ86X10 1494 aa8.9□□□□□ -0.98
IDH3A-204ENST00000558016 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.9□□□□□ -0.98
IDH3A-204ENST00000558016 SLIT2O94813 1529 aa8.9□□□□□ -0.99
IDH3A-204ENST00000558016 BCL9LQ86UU0 1499 aa8.89□□□□□ -0.99
IDH3A-204ENST00000558016 ACEP12821 1306 aa8.89□□□□□ -0.99
IDH3A-204ENST00000558016 GJD4Q96KN9 370 aaPredicted RBP8.89□□□□□ -0.99
IDH3A-204ENST00000558016 CARD11Q9BXL7 1154 aa8.89□□□□□ -0.99
IDH3A-204ENST00000558016 ALS2Q96Q42 1657 aa8.88□□□□□ -0.99
IDH3A-204ENST00000558016 PTGDRQ13258 359 aa8.88□□□□□ -0.99
IDH3A-204ENST00000558016 SF3B2Q13435 895 aaKnown RBP8.88□□□□□ -0.99
IDH3A-204ENST00000558016 SWT1Q5T5J6 900 aaKnown RBP8.88□□□□□ -0.99
IDH3A-204ENST00000558016 ABTB2Q8N961 1025 aa8.88□□□□□ -0.99
IDH3A-204ENST00000558016 STRN4Q9NRL3 753 aa8.88□□□□□ -0.99
IDH3A-204ENST00000558016 BTG4Q9NY30 223 aa8.88□□□□□ -0.99
IDH3A-204ENST00000558016 COL14A1Q05707 1796 aaKnown RBP8.88□□□□□ -0.99
IDH3A-204ENST00000558016 RGS20O76081 388 aa8.87□□□□□ -0.99
IDH3A-204ENST00000558016 NWD2Q9ULI1 1742 aa8.87□□□□□ -0.99
IDH3A-204ENST00000558016 PHRF1Q9P1Y6 1649 aaKnown RBP8.87□□□□□ -0.99
IDH3A-204ENST00000558016 POLR3AO14802 1390 aaPredicted RBP8.86□□□□□ -0.99
IDH3A-204ENST00000558016 KIAA0232Q92628 1395 aa8.86□□□□□ -0.99
IDH3A-204ENST00000558016 GLI3P10071 1580 aa8.86□□□□□ -0.99
IDH3A-204ENST00000558016 ZC3H6P61129 1189 aaKnown RBP8.86□□□□□ -0.99
IDH3A-204ENST00000558016 CHRNA2Q15822 529 aa8.86□□□□□ -0.99
IDH3A-204ENST00000558016 VPS72Q15906 364 aa8.86□□□□□ -0.99
IDH3A-204ENST00000558016 NBPF8Q3BBV2 869 aa8.86□□□□□ -0.99
IDH3A-204ENST00000558016 EYA1Q99502 592 aa8.86□□□□□ -0.99
IDH3A-204ENST00000558016 EVA1CP58658 441 aa8.85□□□□□ -0.99
IDH3A-204ENST00000558016 NLRP13Q86W25 1043 aa8.85□□□□□ -0.99
IDH3A-204ENST00000558016 SEPT12Q8IYM1 358 aa8.85□□□□□ -0.99
IDH3A-204ENST00000558016 TMC1Q8TDI8 760 aa8.85□□□□□ -0.99
IDH3A-204ENST00000558016 PCGF6Q9BYE7 350 aa8.85□□□□□ -0.99
IDH3A-204ENST00000558016 CABP1Q9NZU7 370 aa8.85□□□□□ -0.99
IDH3A-204ENST00000558016 USP35Q9P2H5 1018 aa8.85□□□□□ -0.99
IDH3A-204ENST00000558016 NRKQ7Z2Y5 1582 aa8.85□□□□□ -0.99
IDH3A-204ENST00000558016 PLEKHG3A1L390 1219 aa8.84□□□□□ -0.99
IDH3A-204ENST00000558016 FAM83GA6ND36 823 aa8.84□□□□□ -0.99
IDH3A-204ENST00000558016 USP6P35125 1406 aa8.84□□□□□ -0.99
IDH3A-204ENST00000558016 APLP1P51693 650 aa8.84□□□□□ -0.99
IDH3A-204ENST00000558016 FAM161AQ3B820 660 aa8.84□□□□□ -0.99
IDH3A-204ENST00000558016 TJAP1Q5JTD0 557 aa8.84□□□□□ -0.99
IDH3A-204ENST00000558016 NRAPQ86VF7 1730 aa8.84□□□□□ -0.99
IDH3A-204ENST00000558016 MTRQ99707 1265 aa8.84□□□□□ -0.99
IDH3A-204ENST00000558016 KRT27Q7Z3Y8 459 aa8.83□□□□□ -1
IDH3A-204ENST00000558016 SLF2Q8IX21 1173 aa8.83□□□□□ -1
IDH3A-204ENST00000558016 BRD4O60885 1362 aaPredicted RBP8.83□□□□□ -1
IDH3A-204ENST00000558016 KTN1Q86UP2 1357 aaKnown RBP8.83□□□□□ -1
IDH3A-204ENST00000558016 CRYBG1Q9Y4K1 1723 aa8.83□□□□□ -1
IDH3A-204ENST00000558016 FCHSD2O94868 740 aa8.82□□□□□ -1
IDH3A-204ENST00000558016 HDGFL2Q7Z4V5 671 aaPredicted RBP8.82□□□□□ -1
IDH3A-204ENST00000558016 BLMP54132 1417 aaPredicted RBP8.81□□□□□ -1
IDH3A-204ENST00000558016 SSH2Q76I76 1423 aa8.81□□□□□ -1
IDH3A-204ENST00000558016 EP400Q96L91 3159 aa8.81□□□□□ -1
IDH3A-204ENST00000558016 CSB-PGBD3P0DP91 1061 aa8.81□□□□□ -1
IDH3A-204ENST00000558016 SLC4A3P48751 1232 aa8.81□□□□□ -1
IDH3A-204ENST00000558016 RBM26Q5T8P6 1007 aaKnown RBP8.81□□□□□ -1
IDH3A-204ENST00000558016 RBM46Q8TBY0 533 aaKnown RBP8.81□□□□□ -1
IDH3A-204ENST00000558016 ZNF516Q92618 1163 aa8.81□□□□□ -1
IDH3A-204ENST00000558016 IL21Q9HBE4 155 aa8.81□□□□□ -1
IDH3A-204ENST00000558016 ADGRG1Q9Y653 693 aa8.81□□□□□ -1
IDH3A-204ENST00000558016 USP19O94966 1318 aa8.8□□□□□ -1
IDH3A-204ENST00000558016 SPATA31A5Q5VU36 1347 aa8.8□□□□□ -1
IDH3A-204ENST00000558016 SPATA31A7Q8IWB4 1347 aa8.8□□□□□ -1
IDH3A-204ENST00000558016 TESPA1A2RU30 521 aaPredicted RBP8.8□□□□□ -1
IDH3A-204ENST00000558016 DNAJB2P25686 324 aa8.8□□□□□ -1
IDH3A-204ENST00000558016 CCDC125Q86Z20 511 aa8.8□□□□□ -1
IDH3A-204ENST00000558016 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.8□□□□□ -1
IDH3A-204ENST00000558016 NECTIN2Q92692 538 aa8.8□□□□□ -1
IDH3A-204ENST00000558016 IRX2Q9BZI1 471 aaPredicted RBP8.8□□□□□ -1
IDH3A-204ENST00000558016 SBNO2Q9Y2G9 1366 aa8.8□□□□□ -1
IDH3A-204ENST00000558016 TTC21AQ8NDW8 1320 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms