RNA–Protein interactions for RNA: ENST00000557514.1

TRAV33-201, Transcript of T cell receptor alpha variable 33 (pseudogene), humanhuman

BASIC

Gene TRAV33, Length 338 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV33-201ENST00000557514 KCNA3P22001 575 aa14.76□□□□□ -0.05
TRAV33-201ENST00000557514 PUS7Q96PZ0 661 aaKnown RBP14.76□□□□□ -0.05
TRAV33-201ENST00000557514 CCDC87Q9NVE4 849 aa14.76□□□□□ -0.05
TRAV33-201ENST00000557514 KDRP35968 1356 aa14.75□□□□□ -0.05
TRAV33-201ENST00000557514 RRS1Q15050 365 aaKnown RBP14.75□□□□□ -0.05
TRAV33-201ENST00000557514 NKX1-1Q15270 411 aaPredicted RBP14.75□□□□□ -0.05
TRAV33-201ENST00000557514 NLGN1Q8N2Q7 840 aa14.75□□□□□ -0.05
TRAV33-201ENST00000557514 RRAGCQ9HB90 399 aa14.75□□□□□ -0.05
TRAV33-201ENST00000557514 RNF181Q9P0P0 153 aa14.75□□□□□ -0.05
TRAV33-201ENST00000557514 RGPD2P0DJD1 1756 aa14.75□□□□□ -0.05
TRAV33-201ENST00000557514 NCAPD2Q15021 1401 aa14.75□□□□□ -0.05
TRAV33-201ENST00000557514 INSRP06213 1382 aa14.74□□□□□ -0.05
TRAV33-201ENST00000557514 PKD1L3Q7Z443 1732 aa14.74□□□□□ -0.05
TRAV33-201ENST00000557514 ZC3H4Q9UPT8 1303 aaKnown RBP14.73□□□□□ -0.05
TRAV33-201ENST00000557514 TMF1P82094 1093 aa14.73□□□□□ -0.05
TRAV33-201ENST00000557514 TNRC6CQ9HCJ0 1690 aaKnown RBP14.73□□□□□ -0.05
TRAV33-201ENST00000557514 N4BP2Q86UW6 1770 aaPredicted RBP14.73□□□□□ -0.05
TRAV33-201ENST00000557514 C4AP0C0L4 1744 aa14.72□□□□□ -0.05
TRAV33-201ENST00000557514 GYS1P13807 737 aa14.72□□□□□ -0.05
TRAV33-201ENST00000557514 ADRA2BP18089 450 aa14.72□□□□□ -0.05
TRAV33-201ENST00000557514 ATP6V1AP38606 617 aa14.72□□□□□ -0.05
TRAV33-201ENST00000557514 ASAP1Q9ULH1 1129 aa14.72□□□□□ -0.05
TRAV33-201ENST00000557514 KDM6AO15550 1401 aaPredicted RBP14.72□□□□□ -0.05
TRAV33-201ENST00000557514 FLT4P35916 1363 aa14.72□□□□□ -0.05
TRAV33-201ENST00000557514 KIF24Q5T7B8 1368 aa14.72□□□□□ -0.05
TRAV33-201ENST00000557514 HSP90AB2PQ58FF8 381 aa14.71□□□□□ -0.05
TRAV33-201ENST00000557514 DALRD3Q5D0E6 543 aaKnown RBP14.71□□□□□ -0.05
TRAV33-201ENST00000557514 TMOD3Q9NYL9 352 aa14.71□□□□□ -0.05
TRAV33-201ENST00000557514 PIM2Q9P1W9 311 aa14.71□□□□□ -0.05
TRAV33-201ENST00000557514 RTCBQ9Y3I0 505 aaKnown RBP14.71□□□□□ -0.05
TRAV33-201ENST00000557514 BRCA1P38398 1863 aaKnown RBP14.71□□□□□ -0.05
TRAV33-201ENST00000557514 TRAPPC3LQ5T215 181 aa14.7□□□□□ -0.06
TRAV33-201ENST00000557514 ARHGEF1Q92888 912 aaKnown RBP14.69□□□□□ -0.06
TRAV33-201ENST00000557514 CARD11Q9BXL7 1154 aa14.69□□□□□ -0.06
TRAV33-201ENST00000557514 PARP3Q9Y6F1 533 aa14.69□□□□□ -0.06
TRAV33-201ENST00000557514 CNTNAP4Q9C0A0 1308 aa14.68□□□□□ -0.06
TRAV33-201ENST00000557514 ATG3Q9NT62 314 aa14.68□□□□□ -0.06
TRAV33-201ENST00000557514 ITGB4P16144 1822 aa14.67□□□□□ -0.06
TRAV33-201ENST00000557514 ARFGEF1Q9Y6D6 1849 aa14.67□□□□□ -0.06
TRAV33-201ENST00000557514 VEGFAP15692 232 aaPredicted RBP14.67□□□□□ -0.06
TRAV33-201ENST00000557514 SLC4A9Q96Q91 983 aa14.67□□□□□ -0.06
TRAV33-201ENST00000557514 FYB1O15117 783 aa14.66□□□□□ -0.06
TRAV33-201ENST00000557514 RC3H1Q5TC82 1133 aaKnown RBP14.66□□□□□ -0.06
TRAV33-201ENST00000557514 GGNBP2Q9H3C7 697 aa14.66□□□□□ -0.06
TRAV33-201ENST00000557514 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.66□□□□□ -0.06
TRAV33-201ENST00000557514 SPG7Q9UQ90 795 aa14.66□□□□□ -0.06
TRAV33-201ENST00000557514 TONSLQ96HA7 1378 aa14.65□□□□□ -0.06
TRAV33-201ENST00000557514 GLTPD2A6NH11 291 aa14.65□□□□□ -0.06
TRAV33-201ENST00000557514 RFC4P35249 363 aa14.65□□□□□ -0.06
TRAV33-201ENST00000557514 RASSF7Q02833 373 aa14.65□□□□□ -0.06
TRAV33-201ENST00000557514 DDR1Q08345 913 aa14.65□□□□□ -0.06
TRAV33-201ENST00000557514 TESK2Q96S53 571 aa14.65□□□□□ -0.06
TRAV33-201ENST00000557514 PRDM10Q9NQV6 1147 aa14.65□□□□□ -0.06
TRAV33-201ENST00000557514 RPS6KA4O75676 772 aa14.64□□□□□ -0.07
TRAV33-201ENST00000557514 PHKG2P15735 406 aa14.64□□□□□ -0.07
TRAV33-201ENST00000557514 CHRNA5P30532 468 aa14.64□□□□□ -0.07
TRAV33-201ENST00000557514 SIN3AQ96ST3 1273 aa14.64□□□□□ -0.07
TRAV33-201ENST00000557514 FOXN1O15353 648 aa14.63□□□□□ -0.07
TRAV33-201ENST00000557514 LMNB1P20700 586 aa14.63□□□□□ -0.07
TRAV33-201ENST00000557514 CREBZFQ9NS37 354 aa14.63□□□□□ -0.07
TRAV33-201ENST00000557514 PCDH10Q9P2E7 1040 aa14.63□□□□□ -0.07
TRAV33-201ENST00000557514 ZNF831Q5JPB2 1677 aa14.62□□□□□ -0.07
TRAV33-201ENST00000557514 USP42Q9H9J4 1324 aaKnown RBP14.62□□□□□ -0.07
TRAV33-201ENST00000557514 FKBP8Q14318 412 aa14.61□□□□□ -0.07
TRAV33-201ENST00000557514 IFNL2Q8IZJ0 200 aa14.61□□□□□ -0.07
TRAV33-201ENST00000557514 POTECB2RU33 542 aa14.6□□□□□ -0.07
TRAV33-201ENST00000557514 SRP68Q9UHB9 627 aaKnown RBP14.6□□□□□ -0.07
TRAV33-201ENST00000557514 MKRN1Q9UHC7 482 aaKnown RBP14.6□□□□□ -0.07
TRAV33-201ENST00000557514 EMILIN1Q9Y6C2 1016 aa14.6□□□□□ -0.07
TRAV33-201ENST00000557514 CNTNAP1P78357 1384 aa14.6□□□□□ -0.07
TRAV33-201ENST00000557514 COL5A3P25940 1745 aaPredicted RBP14.59□□□□□ -0.07
TRAV33-201ENST00000557514 POLRMTO00411 1230 aaKnown RBP14.59□□□□□ -0.07
TRAV33-201ENST00000557514 FAM161AQ3B820 660 aa14.59□□□□□ -0.07
TRAV33-201ENST00000557514 RBM42Q9BTD8 480 aaKnown RBP14.58□□□□□ -0.08
TRAV33-201ENST00000557514 ERVV-2B6SEH9 535 aa14.57□□□□□ -0.08
TRAV33-201ENST00000557514 NFKBIEO00221 500 aa14.57□□□□□ -0.08
TRAV33-201ENST00000557514 CTCFP49711 727 aaPredicted RBP14.57□□□□□ -0.08
TRAV33-201ENST00000557514 NEUROD1Q13562 356 aa14.57□□□□□ -0.08
TRAV33-201ENST00000557514 EYA1Q99502 592 aa14.57□□□□□ -0.08
TRAV33-201ENST00000557514 CRKLP46109 303 aaKnown RBP14.56□□□□□ -0.08
TRAV33-201ENST00000557514 TM4SF1P30408 202 aa14.55□□□□□ -0.08
TRAV33-201ENST00000557514 CHADLQ6NUI6 762 aa14.55□□□□□ -0.08
TRAV33-201ENST00000557514 WASHC2AQ641Q2 1341 aa14.55□□□□□ -0.08
TRAV33-201ENST00000557514 SBF1O95248 1867 aa14.55□□□□□ -0.08
TRAV33-201ENST00000557514 ST20-MTHFSA0A0A6YYL1 179 aa14.54□□□□□ -0.08
TRAV33-201ENST00000557514 SLC24A1O60721 1099 aa14.54□□□□□ -0.08
TRAV33-201ENST00000557514 AIDAQ96BJ3 306 aa14.54□□□□□ -0.08
TRAV33-201ENST00000557514 ABHD8Q96I13 439 aa14.54□□□□□ -0.08
TRAV33-201ENST00000557514 TIAM2Q8IVF5 1701 aa14.54□□□□□ -0.08
TRAV33-201ENST00000557514 ANKRD26Q9UPS8 1709 aa14.54□□□□□ -0.08
TRAV33-201ENST00000557514 PASKQ96RG2 1323 aa14.53□□□□□ -0.08
TRAV33-201ENST00000557514 HSP90AB1P08238 724 aaKnown RBP14.52□□□□□ -0.09
TRAV33-201ENST00000557514 POTEIP0CG38 1075 aa14.52□□□□□ -0.09
TRAV33-201ENST00000557514 POTEJP0CG39 1038 aa14.52□□□□□ -0.09
TRAV33-201ENST00000557514 DPY19L2Q6NUT2 758 aa14.52□□□□□ -0.09
TRAV33-201ENST00000557514 TTLL6Q8N841 843 aa14.52□□□□□ -0.09
TRAV33-201ENST00000557514 WBP1LQ9NX94 342 aa14.52□□□□□ -0.09
TRAV33-201ENST00000557514 ADAMTS7Q9UKP4 1686 aa14.52□□□□□ -0.09
TRAV33-201ENST00000557514 MYH14Q7Z406 1995 aaKnown RBP14.51□□□□□ -0.09
TRAV33-201ENST00000557514 LBX1P52954 281 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms