RNA–Protein interactions for RNA: ENST00000557336.1

HNRNPC-231, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 3

Gene HNRNPC, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-231ENST00000557336 EIF4A2Q14240 407 aaKnown RBP15.46■□□□□ 0.07
HNRNPC-231ENST00000557336 MSL1Q68DK7 614 aa15.46■□□□□ 0.07
HNRNPC-231ENST00000557336 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.46■□□□□ 0.072e-20■□□□□ 8.3
HNRNPC-231ENST00000557336 ITGB4P16144 1822 aa15.45■□□□□ 0.06
HNRNPC-231ENST00000557336 C5P01031 1676 aa15.44■□□□□ 0.06
HNRNPC-231ENST00000557336 PHKG2P15735 406 aa15.44■□□□□ 0.06
HNRNPC-231ENST00000557336 YBX3P16989 372 aaKnown RBP eCLIP15.44■□□□□ 0.06
HNRNPC-231ENST00000557336 TNNT2P45379 298 aaPredicted RBP15.44■□□□□ 0.06
HNRNPC-231ENST00000557336 GPR162Q16538 588 aa15.44■□□□□ 0.06
HNRNPC-231ENST00000557336 KLHL34Q8N239 644 aa15.44■□□□□ 0.06
HNRNPC-231ENST00000557336 SPG7Q9UQ90 795 aa15.44■□□□□ 0.06
HNRNPC-231ENST00000557336 MAP2P11137 1827 aaKnown RBP15.44■□□□□ 0.06
HNRNPC-231ENST00000557336 TAF1LQ8IZX4 1826 aa15.43■□□□□ 0.06
HNRNPC-231ENST00000557336 SMARCC1Q92922 1105 aaPredicted RBP15.43■□□□□ 0.06
HNRNPC-231ENST00000557336 POLR3GLQ9BT43 218 aa15.43■□□□□ 0.06
HNRNPC-231ENST00000557336 PANK3Q9H999 370 aa15.43■□□□□ 0.06
HNRNPC-231ENST00000557336 ASAP1Q9ULH1 1129 aa15.43■□□□□ 0.06
HNRNPC-231ENST00000557336 EIF4G2P78344 907 aaKnown RBP eCLIP15.42■□□□□ 0.06
HNRNPC-231ENST00000557336 ITPK1Q13572 414 aa15.42■□□□□ 0.06
HNRNPC-231ENST00000557336 LINC00116Q8NCU8 138 aa15.42■□□□□ 0.06
HNRNPC-231ENST00000557336 IGSF1Q8N6C5 1336 aa15.42■□□□□ 0.06
HNRNPC-231ENST00000557336 CHD4Q14839 1912 aa15.41■□□□□ 0.06
HNRNPC-231ENST00000557336 C4BP0C0L5 1744 aa15.41■□□□□ 0.06
HNRNPC-231ENST00000557336 LOC102724428A0A0B4J2F2 783 aa15.41■□□□□ 0.06
HNRNPC-231ENST00000557336 SIK1P57059 783 aa15.41■□□□□ 0.06
HNRNPC-231ENST00000557336 CEP350Q5VT06 3117 aa15.41■□□□□ 0.06
HNRNPC-231ENST00000557336 IFNL2Q8IZJ0 200 aa15.4■□□□□ 0.06
HNRNPC-231ENST00000557336 FLAD1Q8NFF5 587 aa15.4■□□□□ 0.06
HNRNPC-231ENST00000557336 SLC4A9Q96Q91 983 aa15.4■□□□□ 0.06
HNRNPC-231ENST00000557336 ATG3Q9NT62 314 aa15.4■□□□□ 0.06
HNRNPC-231ENST00000557336 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.39■□□□□ 0.05
HNRNPC-231ENST00000557336 UBR3Q6ZT12 1888 aa15.38■□□□□ 0.05
HNRNPC-231ENST00000557336 PELP1Q8IZL8 1130 aaKnown RBP15.38■□□□□ 0.05
HNRNPC-231ENST00000557336 PIP4P2Q8N4L2 257 aa15.38■□□□□ 0.05
HNRNPC-231ENST00000557336 AK7Q96M32 723 aa15.38■□□□□ 0.05
HNRNPC-231ENST00000557336 TMOD3Q9NYL9 352 aa15.38■□□□□ 0.05
HNRNPC-231ENST00000557336 CD2APQ9Y5K6 639 aa15.38■□□□□ 0.05
HNRNPC-231ENST00000557336 PHF14O94880 888 aa15.37■□□□□ 0.05
HNRNPC-231ENST00000557336 AEBP1Q8IUX7 1158 aa15.37■□□□□ 0.05
HNRNPC-231ENST00000557336 KDRP35968 1356 aa15.36■□□□□ 0.05
HNRNPC-231ENST00000557336 PLEKHG2Q9H7P9 1386 aa15.36■□□□□ 0.05
HNRNPC-231ENST00000557336 SSFA2P28290 1259 aa15.36■□□□□ 0.05
HNRNPC-231ENST00000557336 KDM6AO15550 1401 aaPredicted RBP15.35■□□□□ 0.05
HNRNPC-231ENST00000557336 ATP6V1AP38606 617 aa15.35■□□□□ 0.05
HNRNPC-231ENST00000557336 FXR2P51116 673 aaKnown RBP eCLIP15.35■□□□□ 0.05
HNRNPC-231ENST00000557336 ERVV-2B6SEH9 535 aa15.34■□□□□ 0.05
HNRNPC-231ENST00000557336 HMGB2P26583 209 aaKnown RBP15.34■□□□□ 0.05
HNRNPC-231ENST00000557336 C1QTNF8P60827 252 aa15.34■□□□□ 0.05
HNRNPC-231ENST00000557336 GNPATO15228 680 aa15.33■□□□□ 0.04
HNRNPC-231ENST00000557336 GRIN3BO60391 1043 aa15.33■□□□□ 0.04
HNRNPC-231ENST00000557336 AMER1Q5JTC6 1135 aaPredicted RBP15.33■□□□□ 0.04
HNRNPC-231ENST00000557336 DCAF5Q96JK2 942 aa15.33■□□□□ 0.04
HNRNPC-231ENST00000557336 PRR29P0C7W0 189 aa15.32■□□□□ 0.04
HNRNPC-231ENST00000557336 IL13P35225 146 aa15.32■□□□□ 0.04
HNRNPC-231ENST00000557336 MORC1Q86VD1 984 aa15.32■□□□□ 0.04
HNRNPC-231ENST00000557336 CCER1Q8TC90 406 aaPredicted RBP15.32■□□□□ 0.04
HNRNPC-231ENST00000557336 PLEKHO1Q53GL0 409 aaPredicted RBP15.31■□□□□ 0.04
HNRNPC-231ENST00000557336 ZNF530Q6P9A1 599 aaPredicted RBP15.31■□□□□ 0.04
HNRNPC-231ENST00000557336 KIF7Q2M1P5 1343 aa15.29■□□□□ 0.04
HNRNPC-231ENST00000557336 PER1O15534 1290 aaPredicted RBP15.29■□□□□ 0.04
HNRNPC-231ENST00000557336 AMOTQ4VCS5 1084 aa15.29■□□□□ 0.04
HNRNPC-231ENST00000557336 RC3H1Q5TC82 1133 aaKnown RBP15.29■□□□□ 0.04
HNRNPC-231ENST00000557336 SULT6B1Q6IMI4 303 aa15.29■□□□□ 0.04
HNRNPC-231ENST00000557336 HSP90AB1P08238 724 aaKnown RBP15.28■□□□□ 0.04
HNRNPC-231ENST00000557336 MMP10P09238 476 aa15.28■□□□□ 0.04
HNRNPC-231ENST00000557336 CHADLQ6NUI6 762 aa15.28■□□□□ 0.04
HNRNPC-231ENST00000557336 ARHGEF1Q92888 912 aaKnown RBP15.28■□□□□ 0.04
HNRNPC-231ENST00000557336 WWC3Q9ULE0 1092 aa15.28■□□□□ 0.04
HNRNPC-231ENST00000557336 KNSTRNQ9Y448 316 aa15.28■□□□□ 0.04
HNRNPC-231ENST00000557336 ZNF831Q5JPB2 1677 aa15.28■□□□□ 0.04
HNRNPC-231ENST00000557336 ADCY9O60503 1353 aa15.27■□□□□ 0.04
HNRNPC-231ENST00000557336 CNTNAP4Q9C0A0 1308 aa15.27■□□□□ 0.04
HNRNPC-231ENST00000557336 MTHFSP49914 203 aa15.27■□□□□ 0.04
HNRNPC-231ENST00000557336 CABP4P57796 275 aa15.27■□□□□ 0.04
HNRNPC-231ENST00000557336 POTEHQ6S545 545 aa15.27■□□□□ 0.04
HNRNPC-231ENST00000557336 NFATC2IPQ8NCF5 419 aa15.27■□□□□ 0.04
HNRNPC-231ENST00000557336 MYH14Q7Z406 1995 aaKnown RBP15.26■□□□□ 0.03
HNRNPC-231ENST00000557336 RPS6KA4O75676 772 aa15.26■□□□□ 0.03
HNRNPC-231ENST00000557336 GYS1P13807 737 aa15.26■□□□□ 0.03
HNRNPC-231ENST00000557336 TRAPPC3LQ5T215 181 aa15.26■□□□□ 0.03
HNRNPC-231ENST00000557336 RTCBQ9Y3I0 505 aaKnown RBP15.26■□□□□ 0.03
HNRNPC-231ENST00000557336 COL5A3P25940 1745 aaPredicted RBP15.26■□□□□ 0.03
HNRNPC-231ENST00000557336 ATP10DQ9P241 1426 aa15.26■□□□□ 0.03
HNRNPC-231ENST00000557336 PTCD1O75127 700 aaKnown RBP15.25■□□□□ 0.03
HNRNPC-231ENST00000557336 GIGYF1O75420 1035 aaPredicted RBP15.25■□□□□ 0.03
HNRNPC-231ENST00000557336 KIAA1551Q9HCM1 1747 aa15.24■□□□□ 0.03
HNRNPC-231ENST00000557336 SENP3-EIF4A1A0A087X0R7 540 aa15.24■□□□□ 0.03
HNRNPC-231ENST00000557336 NLGN1Q8N2Q7 840 aa15.24■□□□□ 0.03
HNRNPC-231ENST00000557336 LGR6Q9HBX8 967 aa15.24■□□□□ 0.03
HNRNPC-231ENST00000557336 PXDNLA1KZ92 1463 aa15.24■□□□□ 0.03
HNRNPC-231ENST00000557336 C1orf141Q5JVX7 400 aa15.23■□□□□ 0.03
HNRNPC-231ENST00000557336 INTS5Q6P9B9 1019 aaKnown RBP15.23■□□□□ 0.03
HNRNPC-231ENST00000557336 A0A0G2JLW4 131 aa15.22■□□□□ 0.03
HNRNPC-231ENST00000557336 CRKLP46109 303 aaKnown RBP15.22■□□□□ 0.03
HNRNPC-231ENST00000557336 SRP68Q9UHB9 627 aaKnown RBP15.22■□□□□ 0.03
HNRNPC-231ENST00000557336 C10orf71Q711Q0 1435 aa15.22■□□□□ 0.03
HNRNPC-231ENST00000557336 KIF13BQ9NQT8 1826 aa15.22■□□□□ 0.03
HNRNPC-231ENST00000557336 CICQ96RK0 1608 aaPredicted RBP15.21■□□□□ 0.03
HNRNPC-231ENST00000557336 HMOX1P09601 288 aa15.21■□□□□ 0.03
HNRNPC-231ENST00000557336 PRKAR2AP13861 404 aaKnown RBP15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms