RNA–Protein interactions for RNA: ENST00000556980.5

XRCC3-217, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 5

Gene XRCC3, Length 801 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-217ENST00000556980 U2AF1L5P0DN76 240 aaPredicted RBP24.06■■□□□ 1.44
XRCC3-217ENST00000556980 U2AF1Q01081 240 aaKnown RBP eCLIP24.06■■□□□ 1.44
XRCC3-217ENST00000556980 RBM42Q9BTD8 480 aaKnown RBP24.06■■□□□ 1.44
XRCC3-217ENST00000556980 LINC00116Q8NCU8 138 aa24.05■■□□□ 1.44
XRCC3-217ENST00000556980 C4BP0C0L5 1744 aa24.04■■□□□ 1.44
XRCC3-217ENST00000556980 RNMTO43148 476 aaKnown RBP24.04■■□□□ 1.44
XRCC3-217ENST00000556980 PRKAR2BP31323 418 aa24.04■■□□□ 1.44
XRCC3-217ENST00000556980 ITPK1Q13572 414 aa24.04■■□□□ 1.44
XRCC3-217ENST00000556980 GAS2L2Q8NHY3 880 aa24.04■■□□□ 1.44
XRCC3-217ENST00000556980 LGR6Q9HBX8 967 aa24.04■■□□□ 1.44
XRCC3-217ENST00000556980 COL23A1Q86Y22 540 aaPredicted RBP24.03■■□□□ 1.44
XRCC3-217ENST00000556980 FLAD1Q8NFF5 587 aa24.03■■□□□ 1.44
XRCC3-217ENST00000556980 SGIP1Q9BQI5 828 aa24.03■■□□□ 1.44
XRCC3-217ENST00000556980 RSPH6AQ9H0K4 717 aa24.03■■□□□ 1.44
XRCC3-217ENST00000556980 SLC52A2Q9HAB3 445 aa24.03■■□□□ 1.44
XRCC3-217ENST00000556980 TUBGCP6Q96RT7 1819 aa24.03■■□□□ 1.44
XRCC3-217ENST00000556980 MAP3K5Q99683 1374 aa24.02■■□□□ 1.44
XRCC3-217ENST00000556980 TAF1LQ8IZX4 1826 aa24.01■■□□□ 1.43
XRCC3-217ENST00000556980 POLD1P28340 1107 aa24.01■■□□□ 1.43
XRCC3-217ENST00000556980 MRC1P22897 1456 aa24■■□□□ 1.43
XRCC3-217ENST00000556980 PTCD1O75127 700 aaKnown RBP24■■□□□ 1.43
XRCC3-217ENST00000556980 PHF14O94880 888 aa24■■□□□ 1.43
XRCC3-217ENST00000556980 RALBP1Q15311 655 aa24■■□□□ 1.43
XRCC3-217ENST00000556980 ARXQ96QS3 562 aa24■■□□□ 1.43
XRCC3-217ENST00000556980 SCN11AQ9UI33 1791 aa23.99■■□□□ 1.43
XRCC3-217ENST00000556980 GNAT3A8MTJ3 354 aa23.99■■□□□ 1.43
XRCC3-217ENST00000556980 GNPATO15228 680 aa23.99■■□□□ 1.43
XRCC3-217ENST00000556980 FCHSD2O94868 740 aa23.98■■□□□ 1.43
XRCC3-217ENST00000556980 PHACTR3Q96KR7 559 aa23.98■■□□□ 1.43
XRCC3-217ENST00000556980 SLC4A9Q96Q91 983 aa23.98■■□□□ 1.43
XRCC3-217ENST00000556980 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.97■■□□□ 1.43
XRCC3-217ENST00000556980 AMIGO3Q86WK7 504 aa23.97■■□□□ 1.43
XRCC3-217ENST00000556980 SSFA2P28290 1259 aa23.96■■□□□ 1.43
XRCC3-217ENST00000556980 FHDC1Q9C0D6 1143 aaPredicted RBP23.96■■□□□ 1.43
XRCC3-217ENST00000556980 ADAMTS7Q9UKP4 1686 aa23.95■■□□□ 1.43
XRCC3-217ENST00000556980 MSL1Q68DK7 614 aa23.95■■□□□ 1.42
XRCC3-217ENST00000556980 ZNF831Q5JPB2 1677 aa23.95■■□□□ 1.42
XRCC3-217ENST00000556980 TEFQ10587 303 aa23.94■■□□□ 1.42
XRCC3-217ENST00000556980 SMIM5Q71RC9 77 aa23.94■■□□□ 1.42
XRCC3-217ENST00000556980 CNTNAP4Q9C0A0 1308 aa23.93■■□□□ 1.42
XRCC3-217ENST00000556980 SLC39A6Q13433 755 aa23.93■■□□□ 1.42
XRCC3-217ENST00000556980 NEFMP07197 916 aa23.92■■□□□ 1.42
XRCC3-217ENST00000556980 IL17REQ8NFR9 667 aa23.92■■□□□ 1.42
XRCC3-217ENST00000556980 RTCBQ9Y3I0 505 aaKnown RBP23.92■■□□□ 1.42
XRCC3-217ENST00000556980 DCAF8L1A6NGE4 600 aa23.91■■□□□ 1.42
XRCC3-217ENST00000556980 RC3H1Q5TC82 1133 aaKnown RBP23.91■■□□□ 1.42
XRCC3-217ENST00000556980 KLHL34Q8N239 644 aa23.91■■□□□ 1.42
XRCC3-217ENST00000556980 SYT17Q9BSW7 474 aa23.91■■□□□ 1.42
XRCC3-217ENST00000556980 UBR3Q6ZT12 1888 aa23.91■■□□□ 1.42
XRCC3-217ENST00000556980 MYBBP1AQ9BQG0 1328 aaKnown RBP23.9■■□□□ 1.42
XRCC3-217ENST00000556980 TTC5Q8N0Z6 440 aa23.89■■□□□ 1.41
XRCC3-217ENST00000556980 RTF1Q92541 710 aaKnown RBP23.89■■□□□ 1.41
XRCC3-217ENST00000556980 COL5A3P25940 1745 aaPredicted RBP23.88■■□□□ 1.41
XRCC3-217ENST00000556980 COL24A1Q17RW2 1714 aa23.88■■□□□ 1.41
XRCC3-217ENST00000556980 CRKLP46109 303 aaKnown RBP23.88■■□□□ 1.41
XRCC3-217ENST00000556980 TRAPPC3LQ5T215 181 aa23.88■■□□□ 1.41
XRCC3-217ENST00000556980 CEMIPQ8WUJ3 1361 aa23.88■■□□□ 1.41
XRCC3-217ENST00000556980 RPS6KA4O75676 772 aa23.87■■□□□ 1.41
XRCC3-217ENST00000556980 ADRA2BP18089 450 aa23.87■■□□□ 1.41
XRCC3-217ENST00000556980 DNAJC10Q8IXB1 793 aa23.87■■□□□ 1.41
XRCC3-217ENST00000556980 KCPQ6ZWJ8 1503 aa23.87■■□□□ 1.41
XRCC3-217ENST00000556980 CICQ96RK0 1608 aaPredicted RBP23.86■■□□□ 1.41
XRCC3-217ENST00000556980 PNNQ9H307 717 aaKnown RBP23.86■■□□□ 1.41
XRCC3-217ENST00000556980 TJP1Q07157 1748 aa23.85■■□□□ 1.41
XRCC3-217ENST00000556980 MCM10Q7L590 875 aa23.84■■□□□ 1.41
XRCC3-217ENST00000556980 VIRMAQ69YN4 1812 aaKnown RBP23.84■■□□□ 1.41
XRCC3-217ENST00000556980 MAPK8IP3Q9UPT6 1336 aa23.84■■□□□ 1.41
XRCC3-217ENST00000556980 HTATSF1O43719 755 aaKnown RBP23.83■■□□□ 1.41
XRCC3-217ENST00000556980 RFC4P35249 363 aa23.83■■□□□ 1.41
XRCC3-217ENST00000556980 ZNF790Q6PG37 636 aa23.83■■□□□ 1.41
XRCC3-217ENST00000556980 VSIG10Q8N0Z9 540 aa23.83■■□□□ 1.41
XRCC3-217ENST00000556980 ARHGEF1Q92888 912 aaKnown RBP23.83■■□□□ 1.41
XRCC3-217ENST00000556980 CCDC87Q9NVE4 849 aa23.83■■□□□ 1.41
XRCC3-217ENST00000556980 INTS5Q6P9B9 1019 aaKnown RBP23.82■■□□□ 1.4
XRCC3-217ENST00000556980 PLEKHF1Q96S99 279 aa23.82■■□□□ 1.4
XRCC3-217ENST00000556980 BTBD11A6QL63 1104 aa23.81■■□□□ 1.4
XRCC3-217ENST00000556980 CYP19A1P11511 503 aaPredicted RBP23.81■■□□□ 1.4
XRCC3-217ENST00000556980 ZNF496Q96IT1 587 aaPredicted RBP23.81■■□□□ 1.4
XRCC3-217ENST00000556980 PRKRIP1Q9H875 184 aaPredicted RBP23.81■■□□□ 1.4
XRCC3-217ENST00000556980 DCTN1Q14203 1278 aa23.8■■□□□ 1.4
XRCC3-217ENST00000556980 UBR2Q8IWV8 1755 aa23.79■■□□□ 1.4
XRCC3-217ENST00000556980 FMNL2Q96PY5 1086 aa23.79■■□□□ 1.4
XRCC3-217ENST00000556980 HEG1Q9ULI3 1381 aa23.78■■□□□ 1.4
XRCC3-217ENST00000556980 STARD3NLO95772 234 aa23.78■■□□□ 1.4
XRCC3-217ENST00000556980 NFE2L2Q16236 605 aa23.78■■□□□ 1.4
XRCC3-217ENST00000556980 NLGN1Q8N2Q7 840 aa23.78■■□□□ 1.4
XRCC3-217ENST00000556980 SIPA1L3O60292 1781 aaPredicted RBP23.78■■□□□ 1.4
XRCC3-217ENST00000556980 MMP10P09238 476 aa23.77■■□□□ 1.4
XRCC3-217ENST00000556980 WDR43Q15061 677 aaKnown RBP eCLIP23.77■■□□□ 1.4
XRCC3-217ENST00000556980 NLGN2Q8NFZ4 835 aa23.77■■□□□ 1.4
XRCC3-217ENST00000556980 ZNF316A6NFI3 1004 aaPredicted RBP23.76■■□□□ 1.39
XRCC3-217ENST00000556980 GYS1P13807 737 aa23.76■■□□□ 1.39
XRCC3-217ENST00000556980 TEX13AQ9BXU3 409 aaPredicted RBP23.76■■□□□ 1.39
XRCC3-217ENST00000556980 CD2APQ9Y5K6 639 aa23.76■■□□□ 1.39
XRCC3-217ENST00000556980 SOS1Q07889 1333 aaPredicted RBP23.76■■□□□ 1.39
XRCC3-217ENST00000556980 MYH14Q7Z406 1995 aaKnown RBP23.76■■□□□ 1.39
XRCC3-217ENST00000556980 KCNQ3O43525 872 aa23.75■■□□□ 1.39
XRCC3-217ENST00000556980 ZBTB1Q9Y2K1 713 aa23.75■■□□□ 1.39
XRCC3-217ENST00000556980 USP42Q9H9J4 1324 aaKnown RBP23.75■■□□□ 1.39
XRCC3-217ENST00000556980 SRP68Q9UHB9 627 aaKnown RBP23.74■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms