RNA–Protein interactions for RNA: ENST00000556809.1

PABPN1-206, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2

Gene PABPN1, Length 969 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-206ENST00000556809 ZNF831Q5JPB2 1677 aa30.05■■■□□ 2.4
PABPN1-206ENST00000556809 ZBTB7AO95365 584 aa30.05■■■□□ 2.4
PABPN1-206ENST00000556809 NFATC2IPQ8NCF5 419 aa30.05■■■□□ 2.4
PABPN1-206ENST00000556809 ANP32CO43423 234 aa30.04■■■□□ 2.4
PABPN1-206ENST00000556809 HMGB2P26583 209 aaKnown RBP30.04■■■□□ 2.4
PABPN1-206ENST00000556809 TFCP2L1Q9NZI6 479 aa30.04■■■□□ 2.4
PABPN1-206ENST00000556809 MRC1P22897 1456 aa30.04■■■□□ 2.4
PABPN1-206ENST00000556809 RNMTO43148 476 aaKnown RBP30.03■■■□□ 2.4
PABPN1-206ENST00000556809 PHACTR3Q96KR7 559 aa30.03■■■□□ 2.4
PABPN1-206ENST00000556809 U2AF1L5P0DN76 240 aaPredicted RBP30.02■■■□□ 2.4
PABPN1-206ENST00000556809 PRKAR2BP31323 418 aa30.02■■■□□ 2.4
PABPN1-206ENST00000556809 PTGER2P43116 358 aa30.02■■■□□ 2.4
PABPN1-206ENST00000556809 U2AF1Q01081 240 aaKnown RBP eCLIP30.02■■■□□ 2.41e-7■■□□□ 11.5
PABPN1-206ENST00000556809 MTFR1LQ9H019 292 aa30.02■■■□□ 2.4
PABPN1-206ENST00000556809 FCHSD2O94868 740 aa30.01■■■□□ 2.39
PABPN1-206ENST00000556809 ITPK1Q13572 414 aa30.01■■■□□ 2.39
PABPN1-206ENST00000556809 SLC4A9Q96Q91 983 aa30.01■■■□□ 2.39
PABPN1-206ENST00000556809 COL24A1Q17RW2 1714 aa30■■■□□ 2.39
PABPN1-206ENST00000556809 GAS2L2Q8NHY3 880 aa30■■■□□ 2.39
PABPN1-206ENST00000556809 SLC52A2Q9HAB3 445 aa30■■■□□ 2.39
PABPN1-206ENST00000556809 ATF5Q9Y2D1 282 aaPredicted RBP30■■■□□ 2.39
PABPN1-206ENST00000556809 ATP6V1AP38606 617 aa29.99■■■□□ 2.39
PABPN1-206ENST00000556809 LINC00116Q8NCU8 138 aa29.99■■■□□ 2.39
PABPN1-206ENST00000556809 SGIP1Q9BQI5 828 aa29.99■■■□□ 2.39
PABPN1-206ENST00000556809 UBR3Q6ZT12 1888 aa29.99■■■□□ 2.39
PABPN1-206ENST00000556809 SLC16A10Q8TF71 515 aa29.98■■■□□ 2.39
PABPN1-206ENST00000556809 MAP3K5Q99683 1374 aa29.97■■■□□ 2.39
PABPN1-206ENST00000556809 COL5A3P25940 1745 aaPredicted RBP29.96■■■□□ 2.39
PABPN1-206ENST00000556809 COL23A1Q86Y22 540 aaPredicted RBP29.96■■■□□ 2.39
PABPN1-206ENST00000556809 GNAT3A8MTJ3 354 aa29.95■■■□□ 2.39
PABPN1-206ENST00000556809 CICQ96RK0 1608 aaPredicted RBP29.94■■■□□ 2.38
PABPN1-206ENST00000556809 AMIGO3Q86WK7 504 aa29.94■■■□□ 2.38
PABPN1-206ENST00000556809 IL17REQ8NFR9 667 aa29.94■■■□□ 2.38
PABPN1-206ENST00000556809 RBM42Q9BTD8 480 aaKnown RBP29.94■■■□□ 2.38
PABPN1-206ENST00000556809 SIPA1L3O60292 1781 aaPredicted RBP29.93■■■□□ 2.38
PABPN1-206ENST00000556809 AK7Q96M32 723 aa29.91■■■□□ 2.38
PABPN1-206ENST00000556809 CEMIPQ8WUJ3 1361 aa29.9■■■□□ 2.38
PABPN1-206ENST00000556809 PTCD1O75127 700 aaKnown RBP29.9■■■□□ 2.38
PABPN1-206ENST00000556809 FLAD1Q8NFF5 587 aa29.9■■■□□ 2.38
PABPN1-206ENST00000556809 PPP1R1BQ9UD71 204 aaPredicted RBP29.9■■■□□ 2.38
PABPN1-206ENST00000556809 TJP1Q07157 1748 aa29.9■■■□□ 2.38
PABPN1-206ENST00000556809 UBR2Q8IWV8 1755 aa29.88■■■□□ 2.37
PABPN1-206ENST00000556809 PLEKHF1Q96S99 279 aa29.88■■■□□ 2.37
PABPN1-206ENST00000556809 MYH14Q7Z406 1995 aaKnown RBP29.88■■■□□ 2.37
PABPN1-206ENST00000556809 KCPQ6ZWJ8 1503 aa29.87■■■□□ 2.37
PABPN1-206ENST00000556809 SLC39A6Q13433 755 aa29.87■■■□□ 2.37
PABPN1-206ENST00000556809 SSFA2P28290 1259 aa29.86■■■□□ 2.37
PABPN1-206ENST00000556809 RC3H1Q5TC82 1133 aaKnown RBP29.86■■■□□ 2.37
PABPN1-206ENST00000556809 SMIM5Q71RC9 77 aa29.86■■■□□ 2.37
PABPN1-206ENST00000556809 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP29.85■■■□□ 2.37
PABPN1-206ENST00000556809 CNTNAP4Q9C0A0 1308 aa29.85■■■□□ 2.37
PABPN1-206ENST00000556809 GNPATO15228 680 aa29.84■■■□□ 2.37
PABPN1-206ENST00000556809 DLG5Q8TDM6 1919 aa29.84■■■□□ 2.37
PABPN1-206ENST00000556809 MSH5O43196 834 aa29.83■■■□□ 2.37
PABPN1-206ENST00000556809 WDR43Q15061 677 aaKnown RBP eCLIP29.83■■■□□ 2.37
PABPN1-206ENST00000556809 CCDC184Q52MB2 194 aa29.83■■■□□ 2.37
PABPN1-206ENST00000556809 TEFQ10587 303 aa29.82■■■□□ 2.36
PABPN1-206ENST00000556809 ARXQ96QS3 562 aa29.82■■■□□ 2.36
PABPN1-206ENST00000556809 HTATSF1O43719 755 aaKnown RBP29.81■■■□□ 2.36
PABPN1-206ENST00000556809 PHF14O94880 888 aa29.81■■■□□ 2.36
PABPN1-206ENST00000556809 PNNQ9H307 717 aaKnown RBP29.8■■■□□ 2.36
PABPN1-206ENST00000556809 NEFMP07197 916 aa29.78■■■□□ 2.36
PABPN1-206ENST00000556809 POLD1P28340 1107 aa29.78■■■□□ 2.36
PABPN1-206ENST00000556809 MCM10Q7L590 875 aa29.78■■■□□ 2.36
PABPN1-206ENST00000556809 DNAJC10Q8IXB1 793 aa29.78■■■□□ 2.36
PABPN1-206ENST00000556809 MRS2Q9HD23 443 aa29.78■■■□□ 2.36
PABPN1-206ENST00000556809 RTCBQ9Y3I0 505 aaKnown RBP29.78■■■□□ 2.36
PABPN1-206ENST00000556809 RPS6KA4O75676 772 aa29.77■■■□□ 2.36
PABPN1-206ENST00000556809 CRKLP46109 303 aaKnown RBP29.77■■■□□ 2.36
PABPN1-206ENST00000556809 DIEXFQ68CQ4 756 aaKnown RBP29.77■■■□□ 2.36
PABPN1-206ENST00000556809 ZNF790Q6PG37 636 aa29.77■■■□□ 2.36
PABPN1-206ENST00000556809 VSIG10Q8N0Z9 540 aa29.77■■■□□ 2.36
PABPN1-206ENST00000556809 RTF1Q92541 710 aaKnown RBP29.77■■■□□ 2.36
PABPN1-206ENST00000556809 FHDC1Q9C0D6 1143 aaPredicted RBP29.77■■■□□ 2.36
PABPN1-206ENST00000556809 MSL1Q68DK7 614 aa29.76■■■□□ 2.35
PABPN1-206ENST00000556809 SYT17Q9BSW7 474 aa29.76■■■□□ 2.35
PABPN1-206ENST00000556809 DCTN1Q14203 1278 aa29.75■■■□□ 2.35
PABPN1-206ENST00000556809 INTS5Q6P9B9 1019 aaKnown RBP29.75■■■□□ 2.35
PABPN1-206ENST00000556809 ADAMTS8Q9UP79 889 aa29.75■■■□□ 2.35
PABPN1-206ENST00000556809 ADRA2BP18089 450 aa29.74■■■□□ 2.35
PABPN1-206ENST00000556809 NFE2L2Q16236 605 aa29.74■■■□□ 2.35
PABPN1-206ENST00000556809 TRAPPC3LQ5T215 181 aa29.74■■■□□ 2.35
PABPN1-206ENST00000556809 TTC5Q8N0Z6 440 aa29.74■■■□□ 2.35
PABPN1-206ENST00000556809 ZNF496Q96IT1 587 aaPredicted RBP29.74■■■□□ 2.35
PABPN1-206ENST00000556809 C4AP0C0L4 1744 aa29.74■■■□□ 2.35
PABPN1-206ENST00000556809 MAPK8IP3Q9UPT6 1336 aa29.73■■■□□ 2.35
PABPN1-206ENST00000556809 CYP19A1P11511 503 aaPredicted RBP29.73■■■□□ 2.35
PABPN1-206ENST00000556809 ARHGEF1Q92888 912 aaKnown RBP29.73■■■□□ 2.35
PABPN1-206ENST00000556809 BTBD11A6QL63 1104 aa29.72■■■□□ 2.35
PABPN1-206ENST00000556809 HEG1Q9ULI3 1381 aa29.7■■■□□ 2.35
PABPN1-206ENST00000556809 KCNQ3O43525 872 aa29.7■■■□□ 2.35
PABPN1-206ENST00000556809 CCDC87Q9NVE4 849 aa29.7■■■□□ 2.35
PABPN1-206ENST00000556809 PNISRQ8TF01 805 aaKnown RBP29.69■■■□□ 2.34
PABPN1-206ENST00000556809 CCDC146Q8IYE0 955 aa29.68■■■□□ 2.34
PABPN1-206ENST00000556809 RUNDC1Q96C34 613 aa29.67■■■□□ 2.34
PABPN1-206ENST00000556809 TAF7Q15545 349 aaPredicted RBP29.66■■■□□ 2.34
PABPN1-206ENST00000556809 FMNL2Q96PY5 1086 aa29.66■■■□□ 2.34
PABPN1-206ENST00000556809 SOS1Q07889 1333 aaPredicted RBP29.65■■■□□ 2.34
PABPN1-206ENST00000556809 RFC4P35249 363 aa29.64■■■□□ 2.34
PABPN1-206ENST00000556809 TEX13AQ9BXU3 409 aaPredicted RBP29.64■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms