RNA–Protein interactions for RNA: ENST00000556658.1

RGMA-208, Transcript of repulsive guidance molecule BMP co-receptor a, humanhuman

TSL 1 (best) BASIC

Gene RGMA, Length 1,889 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGMA-208ENST00000556658 FRAT1Q92837 279 aaPredicted RBP25.57■■□□□ 1.68
RGMA-208ENST00000556658 SHANK3Q9BYB0 1731 aa25.56■■□□□ 1.68
RGMA-208ENST00000556658 SLC52A2Q9HAB3 445 aa25.56■■□□□ 1.68
RGMA-208ENST00000556658 KDM3BQ7LBC6 1761 aa25.56■■□□□ 1.68
RGMA-208ENST00000556658 EXOC5O00471 708 aa25.55■■□□□ 1.68
RGMA-208ENST00000556658 NKX1-1Q15270 411 aaPredicted RBP25.55■■□□□ 1.68
RGMA-208ENST00000556658 KRT24Q2M2I5 525 aa25.55■■□□□ 1.68
RGMA-208ENST00000556658 BCL9LQ86UU0 1499 aa25.55■■□□□ 1.68
RGMA-208ENST00000556658 SOS1Q07889 1333 aaPredicted RBP25.55■■□□□ 1.68
RGMA-208ENST00000556658 VPS72Q15906 364 aa25.54■■□□□ 1.68
RGMA-208ENST00000556658 USP21Q9UK80 565 aa25.54■■□□□ 1.68
RGMA-208ENST00000556658 NFATC2IPQ8NCF5 419 aa25.53■■□□□ 1.68
RGMA-208ENST00000556658 KIF16BQ96L93 1317 aa25.53■■□□□ 1.68
RGMA-208ENST00000556658 BRPF1P55201 1214 aaPredicted RBP25.52■■□□□ 1.68
RGMA-208ENST00000556658 CABP4P57796 275 aa25.52■■□□□ 1.68
RGMA-208ENST00000556658 PDE3AQ14432 1141 aa25.52■■□□□ 1.68
RGMA-208ENST00000556658 BARGINQ6ZT62 677 aa25.52■■□□□ 1.68
RGMA-208ENST00000556658 ERVV-2B6SEH9 535 aa25.51■■□□□ 1.67
RGMA-208ENST00000556658 IPO8O15397 1037 aaKnown RBP25.51■■□□□ 1.67
RGMA-208ENST00000556658 ZKSCAN2Q63HK3 967 aa25.51■■□□□ 1.67
RGMA-208ENST00000556658 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.51■■□□□ 1.67
RGMA-208ENST00000556658 MRC1P22897 1456 aa25.5■■□□□ 1.67
RGMA-208ENST00000556658 MS4A1P11836 297 aa25.5■■□□□ 1.67
RGMA-208ENST00000556658 EIF4A1P60842 406 aaKnown RBP25.5■■□□□ 1.67
RGMA-208ENST00000556658 C20orf194Q5TEA3 1177 aa25.5■■□□□ 1.67
RGMA-208ENST00000556658 CHMP4AQ9BY43 222 aa25.49■■□□□ 1.67
RGMA-208ENST00000556658 DDB1Q16531 1140 aa25.49■■□□□ 1.67
RGMA-208ENST00000556658 MRPL50Q8N5N7 158 aaKnown RBP25.49■■□□□ 1.67
RGMA-208ENST00000556658 PPP4R2Q9NY27 417 aa25.49■■□□□ 1.67
RGMA-208ENST00000556658 NOB1Q9ULX3 412 aaKnown RBP25.48■■□□□ 1.67
RGMA-208ENST00000556658 TNS2Q63HR2 1409 aa25.47■■□□□ 1.67
RGMA-208ENST00000556658 KCNQ3O43525 872 aa25.47■■□□□ 1.67
RGMA-208ENST00000556658 EXOC6Q8TAG9 804 aa25.47■■□□□ 1.67
RGMA-208ENST00000556658 CRBNQ96SW2 442 aa25.47■■□□□ 1.67
RGMA-208ENST00000556658 TCERG1O14776 1098 aaKnown RBP25.46■■□□□ 1.67
RGMA-208ENST00000556658 HOXB7P09629 217 aa25.46■■□□□ 1.67
RGMA-208ENST00000556658 ZNF790Q6PG37 636 aa25.46■■□□□ 1.67
RGMA-208ENST00000556658 CCDC30Q5VVM6 783 aa25.45■■□□□ 1.67
RGMA-208ENST00000556658 ATF7IPQ6VMQ6 1270 aa25.45■■□□□ 1.67
RGMA-208ENST00000556658 AFF2P51816 1311 aa25.45■■□□□ 1.66
RGMA-208ENST00000556658 TTC5Q8N0Z6 440 aa25.45■■□□□ 1.66
RGMA-208ENST00000556658 FTSJ3Q8IY81 847 aaKnown RBP25.44■■□□□ 1.66
RGMA-208ENST00000556658 ARHGAP45Q92619 1136 aa25.44■■□□□ 1.66
RGMA-208ENST00000556658 STK31Q9BXU1 1019 aa25.44■■□□□ 1.66
RGMA-208ENST00000556658 CACNA1FO60840 1977 aa25.43■■□□□ 1.66
RGMA-208ENST00000556658 SLC39A6Q13433 755 aa25.43■■□□□ 1.66
RGMA-208ENST00000556658 FAM98CQ17RN3 349 aaKnown RBP25.43■■□□□ 1.66
RGMA-208ENST00000556658 DZIP1LQ8IYY4 767 aaKnown RBP25.43■■□□□ 1.66
RGMA-208ENST00000556658 PANK1Q8TE04 598 aa25.42■■□□□ 1.66
RGMA-208ENST00000556658 SLC4A2P04920 1241 aa25.41■■□□□ 1.66
RGMA-208ENST00000556658 TRIM27P14373 513 aa25.41■■□□□ 1.66
RGMA-208ENST00000556658 HDGFL1Q5TGJ6 251 aa25.4■■□□□ 1.66
RGMA-208ENST00000556658 CLUAP1Q96AJ1 413 aa25.4■■□□□ 1.66
RGMA-208ENST00000556658 TMOD3Q9NYL9 352 aa25.4■■□□□ 1.66
RGMA-208ENST00000556658 HEG1Q9ULI3 1381 aa25.4■■□□□ 1.66
RGMA-208ENST00000556658 KAT6BQ8WYB5 2073 aa25.4■■□□□ 1.66
RGMA-208ENST00000556658 GIGYF1O75420 1035 aaPredicted RBP25.39■■□□□ 1.66
RGMA-208ENST00000556658 TRPC5Q9UL62 973 aaPredicted RBP25.39■■□□□ 1.66
RGMA-208ENST00000556658 TOGARAM1Q9Y4F4 1720 aa25.39■■□□□ 1.65
RGMA-208ENST00000556658 EIF2S2P20042 333 aaKnown RBP25.38■■□□□ 1.65
RGMA-208ENST00000556658 GJD4Q96KN9 370 aaPredicted RBP25.38■■□□□ 1.65
RGMA-208ENST00000556658 FMNL2Q96PY5 1086 aa25.38■■□□□ 1.65
RGMA-208ENST00000556658 API5Q9BZZ5 524 aaKnown RBP25.38■■□□□ 1.65
RGMA-208ENST00000556658 COG6Q9Y2V7 657 aa25.38■■□□□ 1.65
RGMA-208ENST00000556658 NECTIN2Q92692 538 aa25.37■■□□□ 1.65
RGMA-208ENST00000556658 TNNQ9UQP3 1299 aa25.37■■□□□ 1.65
RGMA-208ENST00000556658 ITGB4P16144 1822 aa25.37■■□□□ 1.65
RGMA-208ENST00000556658 RLBP1P12271 317 aa25.36■■□□□ 1.65
RGMA-208ENST00000556658 PTPRCP08575 1304 aa25.36■■□□□ 1.65
RGMA-208ENST00000556658 A0A0G2JS52 829 aa25.36■■□□□ 1.65
RGMA-208ENST00000556658 MYT1Q01538 1121 aa25.36■■□□□ 1.65
RGMA-208ENST00000556658 PELP1Q8IZL8 1130 aaKnown RBP25.36■■□□□ 1.65
RGMA-208ENST00000556658 ZNF496Q96IT1 587 aaPredicted RBP25.35■■□□□ 1.65
RGMA-208ENST00000556658 MARCH10Q8NA82 808 aaPredicted RBP25.34■■□□□ 1.65
RGMA-208ENST00000556658 CCDC136Q96JN2 1154 aa25.34■■□□□ 1.65
RGMA-208ENST00000556658 ATRNO75882 1429 aa25.34■■□□□ 1.65
RGMA-208ENST00000556658 SNRPA1P09661 255 aaKnown RBP25.34■■□□□ 1.65
RGMA-208ENST00000556658 MVPQ14764 893 aaKnown RBP25.33■■□□□ 1.65
RGMA-208ENST00000556658 AAMPQ13685 434 aa25.32■■□□□ 1.64
RGMA-208ENST00000556658 PIGBQ92521 554 aa25.32■■□□□ 1.64
RGMA-208ENST00000556658 QTRT2Q9H974 415 aaKnown RBP25.32■■□□□ 1.64
RGMA-208ENST00000556658 PAPPAQ13219 1627 aa25.32■■□□□ 1.64
RGMA-208ENST00000556658 B4GALNT3Q6L9W6 998 aa25.32■■□□□ 1.64
RGMA-208ENST00000556658 FBXO41Q8TF61 875 aa25.32■■□□□ 1.64
RGMA-208ENST00000556658 UBR2Q8IWV8 1755 aa25.31■■□□□ 1.64
RGMA-208ENST00000556658 GLI3P10071 1580 aa25.31■■□□□ 1.64
RGMA-208ENST00000556658 SYTL4Q96C24 671 aaPredicted RBP25.31■■□□□ 1.64
RGMA-208ENST00000556658 DBF4Q9UBU7 674 aaPredicted RBP25.31■■□□□ 1.64
RGMA-208ENST00000556658 ITPRIPQ8IWB1 547 aa25.3■■□□□ 1.64
RGMA-208ENST00000556658 DOT1LQ8TEK3 1739 aa25.3■■□□□ 1.64
RGMA-208ENST00000556658 TMEM57Q8N5G2 664 aa25.3■■□□□ 1.64
RGMA-208ENST00000556658 DDX19BQ9UMR2 479 aa25.3■■□□□ 1.64
RGMA-208ENST00000556658 THSD7AQ9UPZ6 1657 aa25.3■■□□□ 1.64
RGMA-208ENST00000556658 BCL9O00512 1426 aa25.29■■□□□ 1.64
RGMA-208ENST00000556658 PRAMEF22A3QJZ6 481 aa25.29■■□□□ 1.64
RGMA-208ENST00000556658 PRIM1P49642 420 aaKnown RBP25.29■■□□□ 1.64
RGMA-208ENST00000556658 FLIIQ13045 1269 aa25.29■■□□□ 1.64
RGMA-208ENST00000556658 G2E3Q7L622 706 aa25.29■■□□□ 1.64
RGMA-208ENST00000556658 CHPF2Q9P2E5 772 aa25.29■■□□□ 1.64
RGMA-208ENST00000556658 C5P01031 1676 aa25.29■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms