RNA–Protein interactions for RNA: ENST00000556247.1

LRP1-210, Transcript of LDL receptor related protein 1, humanhuman

TSL 3

Gene LRP1, Length 611 nt, Biotype retained intron, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1-210ENST00000556247 SLC52A2Q9HAB3 445 aa22.03■■□□□ 1.12
LRP1-210ENST00000556247 SCN11AQ9UI33 1791 aa22.02■■□□□ 1.12
LRP1-210ENST00000556247 CABP4P57796 275 aa22.02■■□□□ 1.12
LRP1-210ENST00000556247 ERICH6BQ5W0A0 696 aa22.02■■□□□ 1.12
LRP1-210ENST00000556247 SSH1Q8WYL5 1049 aa22.02■■□□□ 1.12
LRP1-210ENST00000556247 BCL2L13Q9BXK5 485 aa22.02■■□□□ 1.12
LRP1-210ENST00000556247 KRT24Q2M2I5 525 aa22.01■■□□□ 1.11
LRP1-210ENST00000556247 AFF2P51816 1311 aa22.01■■□□□ 1.11
LRP1-210ENST00000556247 ERVV-2B6SEH9 535 aa22■■□□□ 1.11
LRP1-210ENST00000556247 NFATC2IPQ8NCF5 419 aa22■■□□□ 1.11
LRP1-210ENST00000556247 FRAT1Q92837 279 aaPredicted RBP22■■□□□ 1.11
LRP1-210ENST00000556247 WNK3Q9BYP7 1800 aa22■■□□□ 1.11
LRP1-210ENST00000556247 DDB1Q16531 1140 aa21.99■■□□□ 1.11
LRP1-210ENST00000556247 SOS1Q07889 1333 aaPredicted RBP21.99■■□□□ 1.11
LRP1-210ENST00000556247 SHANK3Q9BYB0 1731 aa21.98■■□□□ 1.11
LRP1-210ENST00000556247 EIF4A1P60842 406 aaKnown RBP21.98■■□□□ 1.11
LRP1-210ENST00000556247 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.97■■□□□ 1.11
LRP1-210ENST00000556247 SIPA1L3O60292 1781 aaPredicted RBP21.97■■□□□ 1.11
LRP1-210ENST00000556247 KDM3BQ7LBC6 1761 aa21.97■■□□□ 1.11
LRP1-210ENST00000556247 TNS2Q63HR2 1409 aa21.97■■□□□ 1.11
LRP1-210ENST00000556247 KCNQ3O43525 872 aa21.96■■□□□ 1.11
LRP1-210ENST00000556247 FAM98CQ17RN3 349 aaKnown RBP21.96■■□□□ 1.11
LRP1-210ENST00000556247 MRPL50Q8N5N7 158 aaKnown RBP21.96■■□□□ 1.11
LRP1-210ENST00000556247 MRC1P22897 1456 aa21.96■■□□□ 1.11
LRP1-210ENST00000556247 IPO8O15397 1037 aaKnown RBP21.95■■□□□ 1.1
LRP1-210ENST00000556247 BRPF1P55201 1214 aaPredicted RBP21.95■■□□□ 1.1
LRP1-210ENST00000556247 ZKSCAN2Q63HK3 967 aa21.95■■□□□ 1.1
LRP1-210ENST00000556247 CHMP4AQ9BY43 222 aa21.95■■□□□ 1.1
LRP1-210ENST00000556247 KIF16BQ96L93 1317 aa21.95■■□□□ 1.1
LRP1-210ENST00000556247 TCERG1O14776 1098 aaKnown RBP21.94■■□□□ 1.1
LRP1-210ENST00000556247 MS4A1P11836 297 aa21.94■■□□□ 1.1
LRP1-210ENST00000556247 PDE3AQ14432 1141 aa21.94■■□□□ 1.1
LRP1-210ENST00000556247 TRPC5Q9UL62 973 aaPredicted RBP21.94■■□□□ 1.1
LRP1-210ENST00000556247 NOB1Q9ULX3 412 aaKnown RBP21.94■■□□□ 1.1
LRP1-210ENST00000556247 HOXB7P09629 217 aa21.93■■□□□ 1.1
LRP1-210ENST00000556247 C20orf194Q5TEA3 1177 aa21.93■■□□□ 1.1
LRP1-210ENST00000556247 ZNF790Q6PG37 636 aa21.93■■□□□ 1.1
LRP1-210ENST00000556247 TTC5Q8N0Z6 440 aa21.93■■□□□ 1.1
LRP1-210ENST00000556247 FBXO41Q8TF61 875 aa21.93■■□□□ 1.1
LRP1-210ENST00000556247 SLC39A6Q13433 755 aa21.92■■□□□ 1.1
LRP1-210ENST00000556247 CCDC30Q5VVM6 783 aa21.92■■□□□ 1.1
LRP1-210ENST00000556247 GJD4Q96KN9 370 aaPredicted RBP21.92■■□□□ 1.1
LRP1-210ENST00000556247 A0A0G2JS52 829 aa21.91■■□□□ 1.1
LRP1-210ENST00000556247 MYT1Q01538 1121 aa21.91■■□□□ 1.1
LRP1-210ENST00000556247 CRBNQ96SW2 442 aa21.91■■□□□ 1.1
LRP1-210ENST00000556247 STK31Q9BXU1 1019 aa21.91■■□□□ 1.1
LRP1-210ENST00000556247 TMOD3Q9NYL9 352 aa21.91■■□□□ 1.1
LRP1-210ENST00000556247 EXOC6Q8TAG9 804 aa21.9■■□□□ 1.1
LRP1-210ENST00000556247 ATRNO75882 1429 aa21.89■■□□□ 1.1
LRP1-210ENST00000556247 HDGFL1Q5TGJ6 251 aa21.89■■□□□ 1.09
LRP1-210ENST00000556247 ATF7IPQ6VMQ6 1270 aa21.89■■□□□ 1.09
LRP1-210ENST00000556247 QTRT2Q9H974 415 aaKnown RBP21.89■■□□□ 1.09
LRP1-210ENST00000556247 PPP4R2Q9NY27 417 aa21.89■■□□□ 1.09
LRP1-210ENST00000556247 SLC4A2P04920 1241 aa21.88■■□□□ 1.09
LRP1-210ENST00000556247 FTSJ3Q8IY81 847 aaKnown RBP21.88■■□□□ 1.09
LRP1-210ENST00000556247 MARCH10Q8NA82 808 aaPredicted RBP21.88■■□□□ 1.09
LRP1-210ENST00000556247 ARHGAP45Q92619 1136 aa21.88■■□□□ 1.09
LRP1-210ENST00000556247 GIGYF1O75420 1035 aaPredicted RBP21.87■■□□□ 1.09
LRP1-210ENST00000556247 EIF2S2P20042 333 aaKnown RBP21.87■■□□□ 1.09
LRP1-210ENST00000556247 DZIP1LQ8IYY4 767 aaKnown RBP21.87■■□□□ 1.09
LRP1-210ENST00000556247 PANK1Q8TE04 598 aa21.87■■□□□ 1.09
LRP1-210ENST00000556247 NECTIN2Q92692 538 aa21.87■■□□□ 1.09
LRP1-210ENST00000556247 FMNL2Q96PY5 1086 aa21.87■■□□□ 1.09
LRP1-210ENST00000556247 HEG1Q9ULI3 1381 aa21.87■■□□□ 1.09
LRP1-210ENST00000556247 CLUAP1Q96AJ1 413 aa21.86■■□□□ 1.09
LRP1-210ENST00000556247 API5Q9BZZ5 524 aaKnown RBP21.86■■□□□ 1.09
LRP1-210ENST00000556247 TRIM27P14373 513 aa21.85■■□□□ 1.09
LRP1-210ENST00000556247 ZNF496Q96IT1 587 aaPredicted RBP21.85■■□□□ 1.09
LRP1-210ENST00000556247 TNNQ9UQP3 1299 aa21.85■■□□□ 1.09
LRP1-210ENST00000556247 TOGARAM1Q9Y4F4 1720 aa21.85■■□□□ 1.09
LRP1-210ENST00000556247 SNRPA1P09661 255 aaKnown RBP21.84■■□□□ 1.09
LRP1-210ENST00000556247 PIGBQ92521 554 aa21.84■■□□□ 1.09
LRP1-210ENST00000556247 GLI3P10071 1580 aa21.83■■□□□ 1.09
LRP1-210ENST00000556247 PRIM1P49642 420 aaKnown RBP21.83■■□□□ 1.09
LRP1-210ENST00000556247 SYTL4Q96C24 671 aaPredicted RBP21.83■■□□□ 1.09
LRP1-210ENST00000556247 COG6Q9Y2V7 657 aa21.83■■□□□ 1.09
LRP1-210ENST00000556247 PTPRCP08575 1304 aa21.82■■□□□ 1.08
LRP1-210ENST00000556247 ONECUT3O60422 494 aaPredicted RBP21.82■■□□□ 1.08
LRP1-210ENST00000556247 RLBP1P12271 317 aa21.82■■□□□ 1.08
LRP1-210ENST00000556247 ZNF772Q68DY9 489 aaPredicted RBP21.82■■□□□ 1.08
LRP1-210ENST00000556247 KAT6BQ8WYB5 2073 aa21.81■■□□□ 1.08
LRP1-210ENST00000556247 ITGB4P16144 1822 aa21.8■■□□□ 1.08
LRP1-210ENST00000556247 THSD7AQ9UPZ6 1657 aa21.8■■□□□ 1.08
LRP1-210ENST00000556247 ACSBG1Q96GR2 724 aa21.8■■□□□ 1.08
LRP1-210ENST00000556247 BCL9O00512 1426 aa21.8■■□□□ 1.08
LRP1-210ENST00000556247 PRAMEF22A3QJZ6 481 aa21.79■■□□□ 1.08
LRP1-210ENST00000556247 PTCD1O75127 700 aaKnown RBP21.79■■□□□ 1.08
LRP1-210ENST00000556247 MVPQ14764 893 aaKnown RBP21.79■■□□□ 1.08
LRP1-210ENST00000556247 G2E3Q7L622 706 aa21.79■■□□□ 1.08
LRP1-210ENST00000556247 SEPT12Q8IYM1 358 aa21.79■■□□□ 1.08
LRP1-210ENST00000556247 ATG3Q9NT62 314 aa21.79■■□□□ 1.08
LRP1-210ENST00000556247 DBF4Q9UBU7 674 aaPredicted RBP21.79■■□□□ 1.08
LRP1-210ENST00000556247 ASAP1Q9ULH1 1129 aa21.79■■□□□ 1.08
LRP1-210ENST00000556247 CACNA1FO60840 1977 aa21.79■■□□□ 1.08
LRP1-210ENST00000556247 CHPF2Q9P2E5 772 aa21.78■■□□□ 1.08
LRP1-210ENST00000556247 DOT1LQ8TEK3 1739 aa21.77■■□□□ 1.08
LRP1-210ENST00000556247 PAPPAQ13219 1627 aa21.77■■□□□ 1.08
LRP1-210ENST00000556247 FLIIQ13045 1269 aa21.77■■□□□ 1.08
LRP1-210ENST00000556247 ITPRIPQ8IWB1 547 aa21.77■■□□□ 1.08
LRP1-210ENST00000556247 TMEM57Q8N5G2 664 aa21.77■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms