RNA–Protein interactions for RNA: ENST00000556164.5

PRKCH-220, Transcript of protein kinase C eta, humanhuman

TSL 3

Gene PRKCH, Length 429 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-220ENST00000556164 SMG6Q86US8 1419 aaKnown RBP8.19□□□□□ -1.1
PRKCH-220ENST00000556164 ATP10DQ9P241 1426 aa8.19□□□□□ -1.1
PRKCH-220ENST00000556164 C4BP0C0L5 1744 aa8.18□□□□□ -1.1
PRKCH-220ENST00000556164 TOGARAM1Q9Y4F4 1720 aa8.18□□□□□ -1.1
PRKCH-220ENST00000556164 RIOK3O14730 519 aaKnown RBP8.18□□□□□ -1.1
PRKCH-220ENST00000556164 GSE1Q14687 1217 aa8.18□□□□□ -1.1
PRKCH-220ENST00000556164 KCNV2Q8TDN2 545 aa8.18□□□□□ -1.1
PRKCH-220ENST00000556164 RAPGEF4Q8WZA2 1011 aa8.18□□□□□ -1.1
PRKCH-220ENST00000556164 PUS7Q96PZ0 661 aaKnown RBP8.18□□□□□ -1.1
PRKCH-220ENST00000556164 TONSLQ96HA7 1378 aa8.18□□□□□ -1.1
PRKCH-220ENST00000556164 RRS1Q15050 365 aaKnown RBP8.17□□□□□ -1.1
PRKCH-220ENST00000556164 IFFO2Q5TF58 517 aa8.17□□□□□ -1.1
PRKCH-220ENST00000556164 NBPF6Q5VWK0 638 aa8.17□□□□□ -1.1
PRKCH-220ENST00000556164 NBPF4Q96M43 638 aa8.17□□□□□ -1.1
PRKCH-220ENST00000556164 CGNL1Q0VF96 1302 aa8.17□□□□□ -1.1
PRKCH-220ENST00000556164 PALLDQ8WX93 1383 aa8.17□□□□□ -1.1
PRKCH-220ENST00000556164 TATP17735 454 aaPredicted RBP8.16□□□□□ -1.1
PRKCH-220ENST00000556164 POLA2Q14181 598 aa8.16□□□□□ -1.1
PRKCH-220ENST00000556164 PKD1L3Q7Z443 1732 aa8.16□□□□□ -1.1
PRKCH-220ENST00000556164 FLAD1Q8NFF5 587 aa8.16□□□□□ -1.1
PRKCH-220ENST00000556164 ZNF526Q8TF50 670 aaPredicted RBP8.16□□□□□ -1.1
PRKCH-220ENST00000556164 PCDH11XQ9BZA7 1347 aa8.16□□□□□ -1.1
PRKCH-220ENST00000556164 PCDH11YQ9BZA8 1340 aa8.16□□□□□ -1.1
PRKCH-220ENST00000556164 GGNBP2Q9H3C7 697 aa8.16□□□□□ -1.1
PRKCH-220ENST00000556164 GPBP1L1Q9HC44 474 aaPredicted RBP8.16□□□□□ -1.1
PRKCH-220ENST00000556164 CD2APQ9Y5K6 639 aa8.16□□□□□ -1.1
PRKCH-220ENST00000556164 ST20-MTHFSA0A0A6YYL1 179 aa8.15□□□□□ -1.1
PRKCH-220ENST00000556164 MPRIPQ6WCQ1 1025 aa8.15□□□□□ -1.1
PRKCH-220ENST00000556164 AK7Q96M32 723 aa8.15□□□□□ -1.1
PRKCH-220ENST00000556164 TESK2Q96S53 571 aa8.15□□□□□ -1.1
PRKCH-220ENST00000556164 WWC3Q9ULE0 1092 aa8.15□□□□□ -1.1
PRKCH-220ENST00000556164 ADCY9O60503 1353 aa8.14□□□□□ -1.11
PRKCH-220ENST00000556164 PHF14O94880 888 aa8.14□□□□□ -1.11
PRKCH-220ENST00000556164 HMGB2P26583 209 aaKnown RBP8.14□□□□□ -1.11
PRKCH-220ENST00000556164 HSP90AB2PQ58FF8 381 aa8.14□□□□□ -1.11
PRKCH-220ENST00000556164 POTEHQ6S545 545 aa8.14□□□□□ -1.11
PRKCH-220ENST00000556164 SLC24A3Q9HC58 644 aa8.14□□□□□ -1.11
PRKCH-220ENST00000556164 WDR70Q9NW82 654 aa8.14□□□□□ -1.11
PRKCH-220ENST00000556164 MAP2P11137 1827 aaKnown RBP8.14□□□□□ -1.11
PRKCH-220ENST00000556164 CEP350Q5VT06 3117 aa8.14□□□□□ -1.11
PRKCH-220ENST00000556164 NSD3Q9BZ95 1437 aa8.13□□□□□ -1.11
PRKCH-220ENST00000556164 INSRP06213 1382 aa8.13□□□□□ -1.11
PRKCH-220ENST00000556164 FLT4P35916 1363 aa8.13□□□□□ -1.11
PRKCH-220ENST00000556164 N4BP2Q86UW6 1770 aaPredicted RBP8.13□□□□□ -1.11
PRKCH-220ENST00000556164 IGSF1Q8N6C5 1336 aa8.13□□□□□ -1.11
PRKCH-220ENST00000556164 FYB1O15117 783 aa8.13□□□□□ -1.11
PRKCH-220ENST00000556164 CYP27B1O15528 508 aa8.13□□□□□ -1.11
PRKCH-220ENST00000556164 HSPA6P17066 643 aa8.13□□□□□ -1.11
PRKCH-220ENST00000556164 SMIM5Q71RC9 77 aa8.13□□□□□ -1.11
PRKCH-220ENST00000556164 SMARCC1Q92922 1105 aaPredicted RBP8.13□□□□□ -1.11
PRKCH-220ENST00000556164 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.12□□□□□ -1.11
PRKCH-220ENST00000556164 STK25O00506 426 aa8.12□□□□□ -1.11
PRKCH-220ENST00000556164 AMIGO3Q86WK7 504 aa8.12□□□□□ -1.11
PRKCH-220ENST00000556164 KIF13BQ9NQT8 1826 aa8.12□□□□□ -1.11
PRKCH-220ENST00000556164 ANKRD26Q9UPS8 1709 aa8.12□□□□□ -1.11
PRKCH-220ENST00000556164 TMF1P82094 1093 aa8.11□□□□□ -1.11
PRKCH-220ENST00000556164 PIGBQ92521 554 aa8.11□□□□□ -1.11
PRKCH-220ENST00000556164 KIF24Q5T7B8 1368 aa8.1□□□□□ -1.11
PRKCH-220ENST00000556164 KIAA1551Q9HCM1 1747 aa8.1□□□□□ -1.11
PRKCH-220ENST00000556164 LOC102724428A0A0B4J2F2 783 aa8.1□□□□□ -1.11
PRKCH-220ENST00000556164 SSFA2P28290 1259 aa8.1□□□□□ -1.11
PRKCH-220ENST00000556164 SIK1P57059 783 aa8.1□□□□□ -1.11
PRKCH-220ENST00000556164 LINC00116Q8NCU8 138 aa8.1□□□□□ -1.11
PRKCH-220ENST00000556164 EMILIN1Q9Y6C2 1016 aa8.1□□□□□ -1.11
PRKCH-220ENST00000556164 CICQ96RK0 1608 aaPredicted RBP8.1□□□□□ -1.11
PRKCH-220ENST00000556164 BRCA1P38398 1863 aaKnown RBP8.09□□□□□ -1.11
PRKCH-220ENST00000556164 GNPATO15228 680 aa8.09□□□□□ -1.11
PRKCH-220ENST00000556164 PPM1GO15355 546 aaPredicted RBP8.09□□□□□ -1.11
PRKCH-220ENST00000556164 TMOD3Q9NYL9 352 aa8.09□□□□□ -1.11
PRKCH-220ENST00000556164 SPG7Q9UQ90 795 aa8.09□□□□□ -1.11
PRKCH-220ENST00000556164 NCAPD2Q15021 1401 aa8.09□□□□□ -1.11
PRKCH-220ENST00000556164 KIF3CO14782 793 aa8.08□□□□□ -1.12
PRKCH-220ENST00000556164 PDIA4P13667 645 aaKnown RBP8.08□□□□□ -1.12
PRKCH-220ENST00000556164 ATP6V1AP38606 617 aa8.08□□□□□ -1.12
PRKCH-220ENST00000556164 ITPK1Q13572 414 aa8.08□□□□□ -1.12
PRKCH-220ENST00000556164 ARHGEF1Q92888 912 aaKnown RBP8.08□□□□□ -1.12
PRKCH-220ENST00000556164 ASAP1Q9ULH1 1129 aa8.08□□□□□ -1.12
PRKCH-220ENST00000556164 SSUH2Q9Y2M2 353 aa8.08□□□□□ -1.12
PRKCH-220ENST00000556164 COL5A3P25940 1745 aaPredicted RBP8.08□□□□□ -1.12
PRKCH-220ENST00000556164 ARFGEF1Q9Y6D6 1849 aa8.08□□□□□ -1.12
PRKCH-220ENST00000556164 PXDNLA1KZ92 1463 aa8.07□□□□□ -1.12
PRKCH-220ENST00000556164 C4AP0C0L4 1744 aa8.07□□□□□ -1.12
PRKCH-220ENST00000556164 ZMYND10O75800 440 aa8.07□□□□□ -1.12
PRKCH-220ENST00000556164 MMP10P09238 476 aa8.07□□□□□ -1.12
PRKCH-220ENST00000556164 CDCA8Q53HL2 280 aa8.07□□□□□ -1.12
PRKCH-220ENST00000556164 BCS1LQ9Y276 419 aa8.07□□□□□ -1.12
PRKCH-220ENST00000556164 MYH14Q7Z406 1995 aaKnown RBP8.07□□□□□ -1.12
PRKCH-220ENST00000556164 WDR90Q96KV7 1748 aa8.06□□□□□ -1.12
PRKCH-220ENST00000556164 ZNF831Q5JPB2 1677 aa8.06□□□□□ -1.12
PRKCH-220ENST00000556164 PHKG2P15735 406 aa8.06□□□□□ -1.12
PRKCH-220ENST00000556164 APLP1P51693 650 aa8.06□□□□□ -1.12
PRKCH-220ENST00000556164 IFNL2Q8IZJ0 200 aa8.06□□□□□ -1.12
PRKCH-220ENST00000556164 EYA1Q99502 592 aa8.06□□□□□ -1.12
PRKCH-220ENST00000556164 CARD14Q9BXL6 1004 aa8.06□□□□□ -1.12
PRKCH-220ENST00000556164 WASHC2AQ641Q2 1341 aa8.05□□□□□ -1.12
PRKCH-220ENST00000556164 C10orf71Q711Q0 1435 aa8.05□□□□□ -1.12
PRKCH-220ENST00000556164 A0A0G2JLW4 131 aa8.05□□□□□ -1.12
PRKCH-220ENST00000556164 TRAPPC3LQ5T215 181 aa8.05□□□□□ -1.12
PRKCH-220ENST00000556164 RBM42Q9BTD8 480 aaKnown RBP8.05□□□□□ -1.12
PRKCH-220ENST00000556164 C1orf115Q9H7X2 142 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms