RNA–Protein interactions for RNA: ENST00000556162.5

SNX6-206, Transcript of sorting nexin 6, humanhuman

TSL 2

Gene SNX6, Length 1,855 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-206ENST00000556162 ADAMTS7Q9UKP4 1686 aa18.57■□□□□ 0.56
SNX6-206ENST00000556162 ITGB4P16144 1822 aa18.57■□□□□ 0.56
SNX6-206ENST00000556162 THUMPD2Q9BTF0 503 aaKnown RBP18.56■□□□□ 0.56
SNX6-206ENST00000556162 ASAP1Q9ULH1 1129 aa18.56■□□□□ 0.56
SNX6-206ENST00000556162 TNS1Q9HBL0 1735 aaKnown RBP18.56■□□□□ 0.56
SNX6-206ENST00000556162 CAMKK2Q96RR4 588 aa18.56■□□□□ 0.56
SNX6-206ENST00000556162 ATG3Q9NT62 314 aa18.56■□□□□ 0.56
SNX6-206ENST00000556162 BTAF1O14981 1849 aa18.56■□□□□ 0.56
SNX6-206ENST00000556162 DLG5Q8TDM6 1919 aa18.56■□□□□ 0.56
SNX6-206ENST00000556162 TAF7Q15545 349 aaPredicted RBP18.55■□□□□ 0.56
SNX6-206ENST00000556162 NCBP3Q53F19 620 aaKnown RBP18.55■□□□□ 0.56
SNX6-206ENST00000556162 MRC1P22897 1456 aa18.55■□□□□ 0.56
SNX6-206ENST00000556162 BTBD11A6QL63 1104 aa18.54■□□□□ 0.56
SNX6-206ENST00000556162 EZH2Q15910 746 aaKnown RBP18.54■□□□□ 0.56
SNX6-206ENST00000556162 SALL2Q9Y467 1007 aaPredicted RBP18.54■□□□□ 0.56
SNX6-206ENST00000556162 PALLDQ8WX93 1383 aa18.54■□□□□ 0.56
SNX6-206ENST00000556162 NGEFQ8N5V2 710 aa18.54■□□□□ 0.56
SNX6-206ENST00000556162 TXNRD1Q16881 649 aa18.53■□□□□ 0.56
SNX6-206ENST00000556162 CCDC27Q2M243 656 aa18.53■□□□□ 0.56
SNX6-206ENST00000556162 SLC39A6Q13433 755 aa18.52■□□□□ 0.56
SNX6-206ENST00000556162 TTC5Q8N0Z6 440 aa18.52■□□□□ 0.56
SNX6-206ENST00000556162 VIRMAQ69YN4 1812 aaKnown RBP18.52■□□□□ 0.56
SNX6-206ENST00000556162 CALD1Q05682 793 aaKnown RBP18.52■□□□□ 0.55
SNX6-206ENST00000556162 PROM2Q8N271 834 aa18.52■□□□□ 0.55
SNX6-206ENST00000556162 SLC27A3Q5K4L6 730 aa18.51■□□□□ 0.55
SNX6-206ENST00000556162 ZNF790Q6PG37 636 aa18.51■□□□□ 0.55
SNX6-206ENST00000556162 WWC1Q8IX03 1113 aa18.51■□□□□ 0.55
SNX6-206ENST00000556162 RBM42Q9BTD8 480 aaKnown RBP18.51■□□□□ 0.55
SNX6-206ENST00000556162 PTCD1O75127 700 aaKnown RBP18.5■□□□□ 0.55
SNX6-206ENST00000556162 MIS18AQ9NYP9 233 aa18.5■□□□□ 0.55
SNX6-206ENST00000556162 CCNL1Q9UK58 526 aaPredicted RBP18.5■□□□□ 0.55
SNX6-206ENST00000556162 LOC102724428A0A0B4J2F2 783 aa18.5■□□□□ 0.55
SNX6-206ENST00000556162 SIK1P57059 783 aa18.5■□□□□ 0.55
SNX6-206ENST00000556162 BABAM1Q9NWV8 329 aa18.49■□□□□ 0.55
SNX6-206ENST00000556162 LAS1LQ9Y4W2 734 aaKnown RBP18.49■□□□□ 0.55
SNX6-206ENST00000556162 HMGB2P26583 209 aaKnown RBP18.48■□□□□ 0.55
SNX6-206ENST00000556162 ATP6V1AP38606 617 aa18.48■□□□□ 0.55
SNX6-206ENST00000556162 TSPYL4Q9UJ04 414 aa18.48■□□□□ 0.55
SNX6-206ENST00000556162 KCNQ4P56696 695 aa18.47■□□□□ 0.55
SNX6-206ENST00000556162 LRRC4BQ9NT99 713 aa18.47■□□□□ 0.55
SNX6-206ENST00000556162 RGPD3A6NKT7 1758 aaPredicted RBP18.46■□□□□ 0.55
SNX6-206ENST00000556162 SIPA1L3O60292 1781 aaPredicted RBP18.46■□□□□ 0.55
SNX6-206ENST00000556162 RGPD4Q7Z3J3 1758 aa18.46■□□□□ 0.55
SNX6-206ENST00000556162 KCNQ3O43525 872 aa18.46■□□□□ 0.55
SNX6-206ENST00000556162 CFAP44Q96MT7 982 aa18.46■□□□□ 0.55
SNX6-206ENST00000556162 FMNL2Q96PY5 1086 aa18.46■□□□□ 0.55
SNX6-206ENST00000556162 CHL1O00533 1208 aa18.46■□□□□ 0.54
SNX6-206ENST00000556162 GNAI1P63096 354 aa18.46■□□□□ 0.54
SNX6-206ENST00000556162 WDR63Q8IWG1 891 aa18.46■□□□□ 0.54
SNX6-206ENST00000556162 ZNF496Q96IT1 587 aaPredicted RBP18.45■□□□□ 0.54
SNX6-206ENST00000556162 IFT57Q9NWB7 429 aa18.45■□□□□ 0.54
SNX6-206ENST00000556162 VSIG10Q8N0Z9 540 aa18.44■□□□□ 0.54
SNX6-206ENST00000556162 SLC4A9Q96Q91 983 aa18.44■□□□□ 0.54
SNX6-206ENST00000556162 LY75O60449 1722 aa18.44■□□□□ 0.54
SNX6-206ENST00000556162 NBPF14Q5TI25 921 aa18.43■□□□□ 0.54
SNX6-206ENST00000556162 ZNF853P0CG23 659 aa18.43■□□□□ 0.54
SNX6-206ENST00000556162 IL16Q14005 1332 aa18.43■□□□□ 0.54
SNX6-206ENST00000556162 HNRNPUQ00839 825 aaKnown RBP eCLIP18.42■□□□□ 0.54
SNX6-206ENST00000556162 ITPK1Q13572 414 aa18.42■□□□□ 0.54
SNX6-206ENST00000556162 HEG1Q9ULI3 1381 aa18.42■□□□□ 0.54
SNX6-206ENST00000556162 PAPPAQ13219 1627 aa18.42■□□□□ 0.54
SNX6-206ENST00000556162 KCPQ6ZWJ8 1503 aa18.41■□□□□ 0.54
SNX6-206ENST00000556162 EIF4A1P60842 406 aaKnown RBP18.41■□□□□ 0.54
SNX6-206ENST00000556162 TEX13AQ9BXU3 409 aaPredicted RBP18.41■□□□□ 0.54
SNX6-206ENST00000556162 MBIPQ9NS73 344 aa18.41■□□□□ 0.54
SNX6-206ENST00000556162 SNRPA1P09661 255 aaKnown RBP18.4■□□□□ 0.54
SNX6-206ENST00000556162 DNAJC10Q8IXB1 793 aa18.4■□□□□ 0.54
SNX6-206ENST00000556162 ZNF521Q96K83 1311 aa18.4■□□□□ 0.54
SNX6-206ENST00000556162 RREB1Q92766 1687 aa18.4■□□□□ 0.54
SNX6-206ENST00000556162 LINC00116Q8NCU8 138 aa18.39■□□□□ 0.54
SNX6-206ENST00000556162 STK32BQ9NY57 414 aa18.39■□□□□ 0.54
SNX6-206ENST00000556162 STARD3NLO95772 234 aa18.38■□□□□ 0.53
SNX6-206ENST00000556162 GOLGA2Q08379 1002 aa18.38■□□□□ 0.53
SNX6-206ENST00000556162 UBR2Q8IWV8 1755 aa18.38■□□□□ 0.53
SNX6-206ENST00000556162 GIGYF1O75420 1035 aaPredicted RBP18.37■□□□□ 0.53
SNX6-206ENST00000556162 SLC15A2Q16348 729 aa18.37■□□□□ 0.53
SNX6-206ENST00000556162 KDM3BQ7LBC6 1761 aa18.37■□□□□ 0.53
SNX6-206ENST00000556162 TSR2Q969E8 191 aaKnown RBP18.37■□□□□ 0.53
SNX6-206ENST00000556162 AKT1S1Q96B36 256 aa18.37■□□□□ 0.53
SNX6-206ENST00000556162 AK7Q96M32 723 aa18.37■□□□□ 0.53
SNX6-206ENST00000556162 MYH16Q9H6N6 1097 aa18.37■□□□□ 0.53
SNX6-206ENST00000556162 ANO8Q9HCE9 1232 aaPredicted RBP18.37■□□□□ 0.53
SNX6-206ENST00000556162 ZNF831Q5JPB2 1677 aa18.36■□□□□ 0.53
SNX6-206ENST00000556162 NUP188Q5SRE5 1749 aa18.36■□□□□ 0.53
SNX6-206ENST00000556162 CYP19A1P11511 503 aaPredicted RBP18.36■□□□□ 0.53
SNX6-206ENST00000556162 RC3H1Q5TC82 1133 aaKnown RBP18.36■□□□□ 0.53
SNX6-206ENST00000556162 TFCP2L1Q9NZI6 479 aa18.36■□□□□ 0.53
SNX6-206ENST00000556162 USP16Q9Y5T5 823 aa18.36■□□□□ 0.53
SNX6-206ENST00000556162 PRAMEF22A3QJZ6 481 aa18.35■□□□□ 0.53
SNX6-206ENST00000556162 ZNF827Q17R98 1081 aa18.35■□□□□ 0.53
SNX6-206ENST00000556162 SPINK5Q9NQ38 1064 aaPredicted RBP18.35■□□□□ 0.53
SNX6-206ENST00000556162 CNTNAP4Q9C0A0 1308 aa18.35■□□□□ 0.53
SNX6-206ENST00000556162 CRKLP46109 303 aaKnown RBP18.35■□□□□ 0.53
SNX6-206ENST00000556162 E9PSI1 815 aa18.34■□□□□ 0.53
SNX6-206ENST00000556162 C5P01031 1676 aa18.34■□□□□ 0.53
SNX6-206ENST00000556162 FANCIQ9NVI1 1328 aa18.33■□□□□ 0.53
SNX6-206ENST00000556162 GNPATO15228 680 aa18.33■□□□□ 0.53
SNX6-206ENST00000556162 R3HDM1Q15032 1099 aaKnown RBP18.33■□□□□ 0.53
SNX6-206ENST00000556162 KRT24Q2M2I5 525 aa18.33■□□□□ 0.53
SNX6-206ENST00000556162 CCDC87Q9NVE4 849 aa18.33■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 103.3 ms