RNA–Protein interactions for RNA: ENST00000556142.5

HNRNPC-223, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), human

TSL 5 BASIC

Gene HNRNPC, Length 1,599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HNRNPC-223	ENST00000556142	CANX	P27824	592 aa	Known RBP	12.16	□□□□□ -0.46
HNRNPC-223	ENST00000556142	BABAM1	Q9NWV8	329 aa		12.16	□□□□□ -0.46
HNRNPC-223	ENST00000556142	AAMP	Q13685	434 aa		12.15	□□□□□ -0.46
HNRNPC-223	ENST00000556142	VPS72	Q15906	364 aa		12.15	□□□□□ -0.46
HNRNPC-223	ENST00000556142	KRT24	Q2M2I5	525 aa		12.15	□□□□□ -0.46
HNRNPC-223	ENST00000556142	AMOT	Q4VCS5	1084 aa		12.15	□□□□□ -0.46
HNRNPC-223	ENST00000556142	PLEKHO1	Q53GL0	409 aa	Predicted RBP	12.15	□□□□□ -0.46
HNRNPC-223	ENST00000556142	ATF7IP	Q6VMQ6	1270 aa		12.15	□□□□□ -0.46
HNRNPC-223	ENST00000556142	DZIP1L	Q8IYY4	767 aa	Known RBP	12.15	□□□□□ -0.46
HNRNPC-223	ENST00000556142	RGPD5	Q99666	1765 aa		12.15	□□□□□ -0.46
HNRNPC-223	ENST00000556142	KIF16B	Q96L93	1317 aa		12.14	□□□□□ -0.47
HNRNPC-223	ENST00000556142	ELL2	O00472	640 aa	Predicted RBP	12.14	□□□□□ -0.47
HNRNPC-223	ENST00000556142	ONECUT3	O60422	494 aa	Predicted RBP	12.14	□□□□□ -0.47
HNRNPC-223	ENST00000556142	MS4A1	P11836	297 aa		12.14	□□□□□ -0.47
HNRNPC-223	ENST00000556142	HAP1	P54257	671 aa	Predicted RBP	12.14	□□□□□ -0.47
HNRNPC-223	ENST00000556142	MVP	Q14764	893 aa	Known RBP	12.14	□□□□□ -0.47
HNRNPC-223	ENST00000556142	AKAP4	Q5JQC9	854 aa		12.14	□□□□□ -0.47
HNRNPC-223	ENST00000556142	ARHGAP45	Q92619	1136 aa		12.14	□□□□□ -0.47
HNRNPC-223	ENST00000556142	MIS18A	Q9NYP9	233 aa		12.14	□□□□□ -0.47
HNRNPC-223	ENST00000556142	CCDC9	Q9Y3X0	531 aa	Known RBP	12.14	□□□□□ -0.47
HNRNPC-223	ENST00000556142	FAM208A	Q9UK61	1670 aa	Known RBP	12.14	□□□□□ -0.47
HNRNPC-223	ENST00000556142	CHRNA2	Q15822	529 aa		12.13	□□□□□ -0.47
HNRNPC-223	ENST00000556142	CLUAP1	Q96AJ1	413 aa		12.13	□□□□□ -0.47
HNRNPC-223	ENST00000556142	LGR6	Q9HBX8	967 aa		12.13	□□□□□ -0.47
HNRNPC-223	ENST00000556142	IPO8	O15397	1037 aa	Known RBP	12.13	□□□□□ -0.47
HNRNPC-223	ENST00000556142	DSG3	P32926	999 aa		12.13	□□□□□ -0.47
HNRNPC-223	ENST00000556142	TAF7	Q15545	349 aa	Predicted RBP	12.13	□□□□□ -0.47
HNRNPC-223	ENST00000556142	TSPYL4	Q9UJ04	414 aa		12.13	□□□□□ -0.47
HNRNPC-223	ENST00000556142	PLEKHG2	Q9H7P9	1386 aa		12.12	□□□□□ -0.47
HNRNPC-223	ENST00000556142		A0A0G2JS52	829 aa		12.12	□□□□□ -0.47
HNRNPC-223	ENST00000556142	MYT1	Q01538	1121 aa		12.12	□□□□□ -0.47
HNRNPC-223	ENST00000556142	CENPQ	Q7L2Z9	268 aa	Predicted RBP	12.12	□□□□□ -0.47
HNRNPC-223	ENST00000556142	IGHD	P01880	384 aa		12.11	□□□□□ -0.47
HNRNPC-223	ENST00000556142	ZNF530	Q6P9A1	599 aa	Predicted RBP	12.11	□□□□□ -0.47
HNRNPC-223	ENST00000556142	TMEM57	Q8N5G2	664 aa		12.11	□□□□□ -0.47
HNRNPC-223	ENST00000556142	ABCA3	Q99758	1704 aa		12.1	□□□□□ -0.47
HNRNPC-223	ENST00000556142	OVOS2	A0A0G2JMS6	1433 aa		12.1	□□□□□ -0.47
HNRNPC-223	ENST00000556142	RNMT	O43148	476 aa	Known RBP	12.1	□□□□□ -0.47
HNRNPC-223	ENST00000556142	R3HDM1	Q15032	1099 aa	Known RBP	12.1	□□□□□ -0.47
HNRNPC-223	ENST00000556142	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	12.1	□□□□□ -0.47	4e-12	■■■□□ 16.5
HNRNPC-223	ENST00000556142	PCDHB15	Q9Y5E8	787 aa		12.1	□□□□□ -0.47
HNRNPC-223	ENST00000556142	PLCH1	Q4KWH8	1693 aa		12.1	□□□□□ -0.47
HNRNPC-223	ENST00000556142	ADAMTS7	Q9UKP4	1686 aa		12.1	□□□□□ -0.47
HNRNPC-223	ENST00000556142	TCERG1	O14776	1098 aa	Known RBP	12.09	□□□□□ -0.47
HNRNPC-223	ENST00000556142	EN1	Q05925	392 aa	Predicted RBP	12.09	□□□□□ -0.47
HNRNPC-223	ENST00000556142	FTSJ3	Q8IY81	847 aa	Known RBP	12.09	□□□□□ -0.47
HNRNPC-223	ENST00000556142	NLRP2	Q9NX02	1062 aa		12.09	□□□□□ -0.47
HNRNPC-223	ENST00000556142	NWD2	Q9ULI1	1742 aa		12.09	□□□□□ -0.47
HNRNPC-223	ENST00000556142	ABCC4	O15439	1325 aa		12.09	□□□□□ -0.47
HNRNPC-223	ENST00000556142	SOS1	Q07889	1333 aa	Predicted RBP	12.09	□□□□□ -0.47
HNRNPC-223	ENST00000556142	MEGF6	O75095	1541 aa		12.09	□□□□□ -0.47
HNRNPC-223	ENST00000556142	YY1	P25490	414 aa		12.09	□□□□□ -0.47
HNRNPC-223	ENST00000556142	TAT	P17735	454 aa	Predicted RBP	12.08	□□□□□ -0.48
HNRNPC-223	ENST00000556142	MPRIP	Q6WCQ1	1025 aa		12.08	□□□□□ -0.48
HNRNPC-223	ENST00000556142	PRDM11	Q9NQV5	511 aa		12.08	□□□□□ -0.48
HNRNPC-223	ENST00000556142	ZBTB40	Q9NUA8	1239 aa		12.08	□□□□□ -0.48
HNRNPC-223	ENST00000556142	DDX19B	Q9UMR2	479 aa		12.08	□□□□□ -0.48
HNRNPC-223	ENST00000556142	COL5A2	P05997	1499 aa	Predicted RBP	12.08	□□□□□ -0.48
HNRNPC-223	ENST00000556142	WDR17	Q8IZU2	1322 aa		12.07	□□□□□ -0.48
HNRNPC-223	ENST00000556142	CSB-PGBD3	P0DP91	1061 aa		12.07	□□□□□ -0.48
HNRNPC-223	ENST00000556142	EIF4A1	P60842	406 aa	Known RBP	12.07	□□□□□ -0.48
HNRNPC-223	ENST00000556142	FAM98C	Q17RN3	349 aa	Known RBP	12.07	□□□□□ -0.48
HNRNPC-223	ENST00000556142	RAPGEF4	Q8WZA2	1011 aa		12.07	□□□□□ -0.48
HNRNPC-223	ENST00000556142	API5	Q9BZZ5	524 aa	Known RBP	12.07	□□□□□ -0.48
HNRNPC-223	ENST00000556142	ZBTB7B	O15156	539 aa	Predicted RBP	12.06	□□□□□ -0.48
HNRNPC-223	ENST00000556142	PHKG2	P15735	406 aa		12.06	□□□□□ -0.48
HNRNPC-223	ENST00000556142	C1orf141	Q5JVX7	400 aa		12.06	□□□□□ -0.48
HNRNPC-223	ENST00000556142	KDM3B	Q7LBC6	1761 aa		12.05	□□□□□ -0.48
HNRNPC-223	ENST00000556142	KCNQ3	O43525	872 aa		12.05	□□□□□ -0.48
HNRNPC-223	ENST00000556142	ITPRIP	Q8IWB1	547 aa		12.05	□□□□□ -0.48
HNRNPC-223	ENST00000556142	SPG7	Q9UQ90	795 aa		12.05	□□□□□ -0.48
HNRNPC-223	ENST00000556142	KDM6A	O15550	1401 aa	Predicted RBP	12.05	□□□□□ -0.48
HNRNPC-223	ENST00000556142	PTPRC	P08575	1304 aa		12.05	□□□□□ -0.48
HNRNPC-223	ENST00000556142	HEG1	Q9ULI3	1381 aa		12.05	□□□□□ -0.48
HNRNPC-223	ENST00000556142	FAM182B	Q5T319	152 aa		12.05	□□□□□ -0.48
HNRNPC-223	ENST00000556142	INTS3	Q68E01	1043 aa	Known RBP	12.05	□□□□□ -0.48
HNRNPC-223	ENST00000556142	G2E3	Q7L622	706 aa		12.05	□□□□□ -0.48
HNRNPC-223	ENST00000556142	SKAP1	Q86WV1	359 aa		12.05	□□□□□ -0.48
HNRNPC-223	ENST00000556142	CARD10	Q9BWT7	1032 aa		12.05	□□□□□ -0.48
HNRNPC-223	ENST00000556142	DISP2	A7MBM2	1401 aa		12.05	□□□□□ -0.48
HNRNPC-223	ENST00000556142	PKD1L3	Q7Z443	1732 aa		12.04	□□□□□ -0.48
HNRNPC-223	ENST00000556142	BTBD11	A6QL63	1104 aa		12.04	□□□□□ -0.48
HNRNPC-223	ENST00000556142	CYP27B1	O15528	508 aa		12.04	□□□□□ -0.48
HNRNPC-223	ENST00000556142	HOXB7	P09629	217 aa		12.04	□□□□□ -0.48
HNRNPC-223	ENST00000556142	TEF	Q10587	303 aa		12.04	□□□□□ -0.48
HNRNPC-223	ENST00000556142	EZH2	Q15910	746 aa	Known RBP	12.04	□□□□□ -0.48
HNRNPC-223	ENST00000556142	IFNL2	Q8IZJ0	200 aa		12.04	□□□□□ -0.48
HNRNPC-223	ENST00000556142	SIPA1L3	O60292	1781 aa	Predicted RBP	12.03	□□□□□ -0.48
HNRNPC-223	ENST00000556142	HDAC1	Q13547	482 aa	Predicted RBP	12.03	□□□□□ -0.48
HNRNPC-223	ENST00000556142	CCDC30	Q5VVM6	783 aa		12.03	□□□□□ -0.48
HNRNPC-223	ENST00000556142	BTG4	Q9NY30	223 aa		12.03	□□□□□ -0.48
HNRNPC-223	ENST00000556142	RBM19	Q9Y4C8	960 aa	Known RBP	12.03	□□□□□ -0.48
HNRNPC-223	ENST00000556142	LARP1	Q6PKG0	1096 aa	Known RBP	12.02	□□□□□ -0.49
HNRNPC-223	ENST00000556142	TOM1L2	Q6ZVM7	507 aa		12.02	□□□□□ -0.49
HNRNPC-223	ENST00000556142	NRAP	Q86VF7	1730 aa		12.02	□□□□□ -0.49
HNRNPC-223	ENST00000556142	TNS1	Q9HBL0	1735 aa	Known RBP	12.01	□□□□□ -0.49
HNRNPC-223	ENST00000556142	RWDD1	Q9H446	243 aa	Predicted RBP	12.01	□□□□□ -0.49
HNRNPC-223	ENST00000556142	SLC52A2	Q9HAB3	445 aa		12.01	□□□□□ -0.49
HNRNPC-223	ENST00000556142	MRC1	P22897	1456 aa		12.01	□□□□□ -0.49
HNRNPC-223	ENST00000556142	NKX1-1	Q15270	411 aa	Predicted RBP	12.01	□□□□□ -0.49

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