RNA–Protein interactions for RNA: ENST00000555269.5

TRAPPC6B-205, Transcript of trafficking protein particle complex 6B, humanhuman

TSL 1 (best)

Gene TRAPPC6B, Length 1,000 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6B-205ENST00000555269 RGPD3A6NKT7 1758 aaPredicted RBP16.65■□□□□ 0.26
TRAPPC6B-205ENST00000555269 RGPD4Q7Z3J3 1758 aa16.65■□□□□ 0.26
TRAPPC6B-205ENST00000555269 U2AF1L5P0DN76 240 aaPredicted RBP16.65■□□□□ 0.26
TRAPPC6B-205ENST00000555269 U2AF1Q01081 240 aaKnown RBP eCLIP16.65■□□□□ 0.26
TRAPPC6B-205ENST00000555269 AKAP4Q5JQC9 854 aa16.65■□□□□ 0.26
TRAPPC6B-205ENST00000555269 PLEKHG2Q9H7P9 1386 aa16.64■□□□□ 0.26
TRAPPC6B-205ENST00000555269 TFCP2L1Q9NZI6 479 aa16.64■□□□□ 0.25
TRAPPC6B-205ENST00000555269 KDM6AO15550 1401 aaPredicted RBP16.63■□□□□ 0.25
TRAPPC6B-205ENST00000555269 TOGARAM1Q9Y4F4 1720 aa16.63■□□□□ 0.25
TRAPPC6B-205ENST00000555269 LOC102724428A0A0B4J2F2 783 aa16.63■□□□□ 0.25
TRAPPC6B-205ENST00000555269 RNMTO43148 476 aaKnown RBP16.63■□□□□ 0.25
TRAPPC6B-205ENST00000555269 PRKAR2BP31323 418 aa16.63■□□□□ 0.25
TRAPPC6B-205ENST00000555269 SIK1P57059 783 aa16.63■□□□□ 0.25
TRAPPC6B-205ENST00000555269 RSPH6AQ9H0K4 717 aa16.63■□□□□ 0.25
TRAPPC6B-205ENST00000555269 SPON1Q9HCB6 807 aa16.63■□□□□ 0.25
TRAPPC6B-205ENST00000555269 RALBP1Q15311 655 aa16.62■□□□□ 0.25
TRAPPC6B-205ENST00000555269 SMIM5Q71RC9 77 aa16.62■□□□□ 0.25
TRAPPC6B-205ENST00000555269 SLC4A9Q96Q91 983 aa16.62■□□□□ 0.25
TRAPPC6B-205ENST00000555269 ATP6V1AP38606 617 aa16.61■□□□□ 0.25
TRAPPC6B-205ENST00000555269 ITPK1Q13572 414 aa16.61■□□□□ 0.25
TRAPPC6B-205ENST00000555269 RBM42Q9BTD8 480 aaKnown RBP16.61■□□□□ 0.25
TRAPPC6B-205ENST00000555269 FCHSD2O94868 740 aa16.6■□□□□ 0.25
TRAPPC6B-205ENST00000555269 LINC00116Q8NCU8 138 aa16.6■□□□□ 0.25
TRAPPC6B-205ENST00000555269 ITGB4P16144 1822 aa16.6■□□□□ 0.25
TRAPPC6B-205ENST00000555269 PNPLA7Q6ZV29 1317 aa16.6■□□□□ 0.25
TRAPPC6B-205ENST00000555269 PTCD1O75127 700 aaKnown RBP16.59■□□□□ 0.25
TRAPPC6B-205ENST00000555269 AMIGO3Q86WK7 504 aa16.59■□□□□ 0.25
TRAPPC6B-205ENST00000555269 COL23A1Q86Y22 540 aaPredicted RBP16.59■□□□□ 0.25
TRAPPC6B-205ENST00000555269 IL17REQ8NFR9 667 aa16.59■□□□□ 0.25
TRAPPC6B-205ENST00000555269 SLC52A2Q9HAB3 445 aa16.59■□□□□ 0.25
TRAPPC6B-205ENST00000555269 ZNF316A6NFI3 1004 aaPredicted RBP16.58■□□□□ 0.24
TRAPPC6B-205ENST00000555269 GNAT3A8MTJ3 354 aa16.58■□□□□ 0.24
TRAPPC6B-205ENST00000555269 PTGER2P43116 358 aa16.58■□□□□ 0.24
TRAPPC6B-205ENST00000555269 SLC39A6Q13433 755 aa16.58■□□□□ 0.24
TRAPPC6B-205ENST00000555269 GAS2L2Q8NHY3 880 aa16.58■□□□□ 0.24
TRAPPC6B-205ENST00000555269 MTFR1LQ9H019 292 aa16.57■□□□□ 0.24
TRAPPC6B-205ENST00000555269 LY75O60449 1722 aa16.56■□□□□ 0.24
TRAPPC6B-205ENST00000555269 PAPPAQ13219 1627 aa16.56■□□□□ 0.24
TRAPPC6B-205ENST00000555269 DSG3P32926 999 aa16.56■□□□□ 0.24
TRAPPC6B-205ENST00000555269 PPP1R1BQ9UD71 204 aaPredicted RBP16.56■□□□□ 0.24
TRAPPC6B-205ENST00000555269 AK7Q96M32 723 aa16.55■□□□□ 0.24
TRAPPC6B-205ENST00000555269 ZNF219Q9P2Y4 722 aaPredicted RBP16.55■□□□□ 0.24
TRAPPC6B-205ENST00000555269 PHF14O94880 888 aa16.54■□□□□ 0.24
TRAPPC6B-205ENST00000555269 SGIP1Q9BQI5 828 aa16.54■□□□□ 0.24
TRAPPC6B-205ENST00000555269 PRKRIP1Q9H875 184 aaPredicted RBP16.54■□□□□ 0.24
TRAPPC6B-205ENST00000555269 MYBBP1AQ9BQG0 1328 aaKnown RBP16.53■□□□□ 0.24
TRAPPC6B-205ENST00000555269 DCTN1Q14203 1278 aa16.53■□□□□ 0.24
TRAPPC6B-205ENST00000555269 SLC16A10Q8TF71 515 aa16.53■□□□□ 0.24
TRAPPC6B-205ENST00000555269 PLEKHF1Q96S99 279 aa16.53■□□□□ 0.24
TRAPPC6B-205ENST00000555269 MAP3K5Q99683 1374 aa16.52■□□□□ 0.24
TRAPPC6B-205ENST00000555269 CASZ1Q86V15 1759 aa16.52■□□□□ 0.24
TRAPPC6B-205ENST00000555269 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.52■□□□□ 0.24
TRAPPC6B-205ENST00000555269 HMGB2P26583 209 aaKnown RBP16.52■□□□□ 0.24
TRAPPC6B-205ENST00000555269 MSL1Q68DK7 614 aa16.52■□□□□ 0.24
TRAPPC6B-205ENST00000555269 MCM10Q7L590 875 aa16.52■□□□□ 0.24
TRAPPC6B-205ENST00000555269 LRP5O75197 1615 aa16.52■□□□□ 0.23
TRAPPC6B-205ENST00000555269 GNPATO15228 680 aa16.51■□□□□ 0.23
TRAPPC6B-205ENST00000555269 TEFQ10587 303 aa16.51■□□□□ 0.23
TRAPPC6B-205ENST00000555269 KCNQ3O43525 872 aa16.5■□□□□ 0.23
TRAPPC6B-205ENST00000555269 DNAJC10Q8IXB1 793 aa16.5■□□□□ 0.23
TRAPPC6B-205ENST00000555269 FLAD1Q8NFF5 587 aa16.5■□□□□ 0.23
TRAPPC6B-205ENST00000555269 RC3H1Q5TC82 1133 aaKnown RBP16.49■□□□□ 0.23
TRAPPC6B-205ENST00000555269 RTF1Q92541 710 aaKnown RBP16.49■□□□□ 0.23
TRAPPC6B-205ENST00000555269 ARXQ96QS3 562 aa16.49■□□□□ 0.23
TRAPPC6B-205ENST00000555269 CRKLP46109 303 aaKnown RBP16.48■□□□□ 0.23
TRAPPC6B-205ENST00000555269 FHDC1Q9C0D6 1143 aaPredicted RBP16.48■□□□□ 0.23
TRAPPC6B-205ENST00000555269 SCN11AQ9UI33 1791 aa16.47■□□□□ 0.23
TRAPPC6B-205ENST00000555269 RPS6KA4O75676 772 aa16.47■□□□□ 0.23
TRAPPC6B-205ENST00000555269 NEFMP07197 916 aa16.47■□□□□ 0.23
TRAPPC6B-205ENST00000555269 SSFA2P28290 1259 aa16.47■□□□□ 0.23
TRAPPC6B-205ENST00000555269 TRAPPC3LQ5T215 181 aa16.47■□□□□ 0.23
TRAPPC6B-205ENST00000555269 INTS5Q6P9B9 1019 aaKnown RBP16.47■□□□□ 0.23
TRAPPC6B-205ENST00000555269 ZNF790Q6PG37 636 aa16.47■□□□□ 0.23
TRAPPC6B-205ENST00000555269 ARHGEF1Q92888 912 aaKnown RBP16.47■□□□□ 0.23
TRAPPC6B-205ENST00000555269 RTCBQ9Y3I0 505 aaKnown RBP16.47■□□□□ 0.23
TRAPPC6B-205ENST00000555269 C4BP0C0L5 1744 aa16.46■□□□□ 0.23
TRAPPC6B-205ENST00000555269 BTBD11A6QL63 1104 aa16.46■□□□□ 0.23
TRAPPC6B-205ENST00000555269 HTATSF1O43719 755 aaKnown RBP16.46■□□□□ 0.23
TRAPPC6B-205ENST00000555269 ABCB7O75027 752 aa16.46■□□□□ 0.23
TRAPPC6B-205ENST00000555269 POLD1P28340 1107 aa16.46■□□□□ 0.23
TRAPPC6B-205ENST00000555269 NFE2L2Q16236 605 aa16.46■□□□□ 0.23
TRAPPC6B-205ENST00000555269 CCDC146Q8IYE0 955 aa16.46■□□□□ 0.23
TRAPPC6B-205ENST00000555269 ZNF496Q96IT1 587 aaPredicted RBP16.46■□□□□ 0.23
TRAPPC6B-205ENST00000555269 SYT17Q9BSW7 474 aa16.46■□□□□ 0.23
TRAPPC6B-205ENST00000555269 PNNQ9H307 717 aaKnown RBP16.46■□□□□ 0.23
TRAPPC6B-205ENST00000555269 MIS18AQ9NYP9 233 aa16.46■□□□□ 0.23
TRAPPC6B-205ENST00000555269 ADAMTS8Q9UP79 889 aa16.46■□□□□ 0.23
TRAPPC6B-205ENST00000555269 CEMIPQ8WUJ3 1361 aa16.46■□□□□ 0.23
TRAPPC6B-205ENST00000555269 C5P01031 1676 aa16.46■□□□□ 0.23
TRAPPC6B-205ENST00000555269 TAF1LQ8IZX4 1826 aa16.45■□□□□ 0.22
TRAPPC6B-205ENST00000555269 CYP19A1P11511 503 aaPredicted RBP16.45■□□□□ 0.22
TRAPPC6B-205ENST00000555269 CCDC184Q52MB2 194 aa16.45■□□□□ 0.22
TRAPPC6B-205ENST00000555269 TTC5Q8N0Z6 440 aa16.45■□□□□ 0.22
TRAPPC6B-205ENST00000555269 THUMPD2Q9BTF0 503 aaKnown RBP16.45■□□□□ 0.22
TRAPPC6B-205ENST00000555269 CNTNAP4Q9C0A0 1308 aa16.45■□□□□ 0.22
TRAPPC6B-205ENST00000555269 KLHL34Q8N239 644 aa16.44■□□□□ 0.22
TRAPPC6B-205ENST00000555269 TUBGCP6Q96RT7 1819 aa16.44■□□□□ 0.22
TRAPPC6B-205ENST00000555269 MRC1P22897 1456 aa16.43■□□□□ 0.22
TRAPPC6B-205ENST00000555269 WDR43Q15061 677 aaKnown RBP eCLIP16.43■□□□□ 0.22
TRAPPC6B-205ENST00000555269 TAF7Q15545 349 aaPredicted RBP16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms