RNA–Protein interactions for RNA: ENST00000555002.5

SYNE2-216, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 11,532 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-216ENST00000555002 IKBKGQ9Y6K9 419 aa8□□□□□ -1.13
SYNE2-216ENST00000555002 DHX57Q6P158 1386 aaKnown RBP8□□□□□ -1.13
SYNE2-216ENST00000555002 IMMTQ16891 758 aaKnown RBP8□□□□□ -1.13
SYNE2-216ENST00000555002 SMARCA2P51531 1590 aa8□□□□□ -1.13
SYNE2-216ENST00000555002 METTL24Q5JXM2 366 aa8□□□□□ -1.13
SYNE2-216ENST00000555002 PAIP2Q9BPZ3 127 aaKnown RBP8□□□□□ -1.13
SYNE2-216ENST00000555002 NOB1Q9ULX3 412 aaKnown RBP8□□□□□ -1.13
SYNE2-216ENST00000555002 CEP131Q9UPN4 1083 aa8□□□□□ -1.13
SYNE2-216ENST00000555002 BCAR3O75815 825 aa8□□□□□ -1.13
SYNE2-216ENST00000555002 FILIP1Q7Z7B0 1213 aa8□□□□□ -1.13
SYNE2-216ENST00000555002 SRRTQ9BXP5 876 aaKnown RBP8□□□□□ -1.13
SYNE2-216ENST00000555002 MKNK2Q9HBH9 465 aa7.99□□□□□ -1.13
SYNE2-216ENST00000555002 PRDM11Q9NQV5 511 aa7.99□□□□□ -1.13
SYNE2-216ENST00000555002 SPG7Q9UQ90 795 aa7.99□□□□□ -1.13
SYNE2-216ENST00000555002 TERF1P54274 439 aa7.99□□□□□ -1.13
SYNE2-216ENST00000555002 STAC3Q96MF2 364 aa7.99□□□□□ -1.13
SYNE2-216ENST00000555002 CWC27Q6UX04 472 aaKnown RBP7.99□□□□□ -1.13
SYNE2-216ENST00000555002 PSMC4P43686 418 aa7.99□□□□□ -1.13
SYNE2-216ENST00000555002 MAATS1Q7Z4T9 603 aa7.99□□□□□ -1.13
SYNE2-216ENST00000555002 ZBED9Q6R2W3 1325 aa7.99□□□□□ -1.13
SYNE2-216ENST00000555002 C16orf71Q8IYS4 520 aaPredicted RBP7.99□□□□□ -1.13
SYNE2-216ENST00000555002 TMEM132EQ6IEE7 984 aa7.99□□□□□ -1.13
SYNE2-216ENST00000555002 RANBP6O60518 1105 aaKnown RBP7.99□□□□□ -1.13
SYNE2-216ENST00000555002 ATP2C2O75185 946 aa7.99□□□□□ -1.13
SYNE2-216ENST00000555002 MXRA7P84157 204 aa7.99□□□□□ -1.13
SYNE2-216ENST00000555002 VPS8Q8N3P4 1428 aa7.99□□□□□ -1.13
SYNE2-216ENST00000555002 PRC1O43663 620 aa7.99□□□□□ -1.13
SYNE2-216ENST00000555002 CKAP2LQ8IYA6 745 aa7.99□□□□□ -1.13
SYNE2-216ENST00000555002 NUP88Q99567 741 aaPredicted RBP7.99□□□□□ -1.13
SYNE2-216ENST00000555002 KIF20AO95235 890 aa7.98□□□□□ -1.13
SYNE2-216ENST00000555002 CECR2Q9BXF3 1484 aa7.98□□□□□ -1.13
SYNE2-216ENST00000555002 HLTFQ14527 1009 aaKnown RBP eCLIP7.98□□□□□ -1.13
SYNE2-216ENST00000555002 TMEM266Q2M3C6 531 aa7.98□□□□□ -1.13
SYNE2-216ENST00000555002 RRBP1Q9P2E9 1410 aaKnown RBP7.98□□□□□ -1.13
SYNE2-216ENST00000555002 DPH6Q7L8W6 267 aa7.98□□□□□ -1.13
SYNE2-216ENST00000555002 CASTP20810 708 aaKnown RBP7.98□□□□□ -1.13
SYNE2-216ENST00000555002 MAP9Q49MG5 647 aa7.98□□□□□ -1.13
SYNE2-216ENST00000555002 IPO4Q8TEX9 1081 aaKnown RBP7.98□□□□□ -1.13
SYNE2-216ENST00000555002 SREK1Q8WXA9 508 aaKnown RBP7.98□□□□□ -1.13
SYNE2-216ENST00000555002 CTNNA3Q9UI47 895 aa7.98□□□□□ -1.13
SYNE2-216ENST00000555002 PRKAR2BP31323 418 aa7.98□□□□□ -1.13
SYNE2-216ENST00000555002 PROCA1Q8NCQ7 364 aaPredicted RBP7.98□□□□□ -1.13
SYNE2-216ENST00000555002 TRERF1Q96PN7 1200 aa7.98□□□□□ -1.13
SYNE2-216ENST00000555002 POLR3GO15318 223 aaPredicted RBP7.98□□□□□ -1.13
SYNE2-216ENST00000555002 SLC4A2P04920 1241 aa7.98□□□□□ -1.13
SYNE2-216ENST00000555002 GJC1P36383 396 aa7.98□□□□□ -1.13
SYNE2-216ENST00000555002 BLOC1S2Q6QNY1 142 aa7.98□□□□□ -1.13
SYNE2-216ENST00000555002 TSR2Q969E8 191 aaKnown RBP7.98□□□□□ -1.13
SYNE2-216ENST00000555002 NUP62CLQ9H1M0 184 aa7.98□□□□□ -1.13
SYNE2-216ENST00000555002 WDR33Q9C0J8 1336 aaKnown RBP7.97□□□□□ -1.13
SYNE2-216ENST00000555002 CCDC160A6NGH7 325 aa7.97□□□□□ -1.13
SYNE2-216ENST00000555002 FERMT1Q9BQL6 677 aa7.97□□□□□ -1.13
SYNE2-216ENST00000555002 CLEC11AQ9Y240 323 aa7.97□□□□□ -1.13
SYNE2-216ENST00000555002 NAP1L3Q99457 506 aaPredicted RBP7.97□□□□□ -1.13
SYNE2-216ENST00000555002 NOP2P46087 812 aaKnown RBP7.97□□□□□ -1.13
SYNE2-216ENST00000555002 TAF12Q16514 161 aa7.97□□□□□ -1.13
SYNE2-216ENST00000555002 GON4LQ3T8J9 2241 aa7.97□□□□□ -1.13
SYNE2-216ENST00000555002 FGFR1OPO95684 399 aaKnown RBP7.97□□□□□ -1.13
SYNE2-216ENST00000555002 CEP126Q9P2H0 1117 aa7.97□□□□□ -1.13
SYNE2-216ENST00000555002 PDS5BQ9NTI5 1447 aa7.97□□□□□ -1.13
SYNE2-216ENST00000555002 A0A1W2PRG0 241 aa7.97□□□□□ -1.13
SYNE2-216ENST00000555002 BTBD11A6QL63 1104 aa7.97□□□□□ -1.13
SYNE2-216ENST00000555002 KIF5CO60282 957 aa7.97□□□□□ -1.13
SYNE2-216ENST00000555002 PLS1Q14651 629 aa7.97□□□□□ -1.13
SYNE2-216ENST00000555002 CCDC40Q4G0X9 1142 aa7.97□□□□□ -1.13
SYNE2-216ENST00000555002 TCERG1LQ5VWI1 586 aa7.97□□□□□ -1.13
SYNE2-216ENST00000555002 CCDC82Q8N4S0 544 aa7.97□□□□□ -1.13
SYNE2-216ENST00000555002 SMTNL1A8MU46 457 aa7.97□□□□□ -1.13
SYNE2-216ENST00000555002 MTIF2P46199 727 aaKnown RBP7.96□□□□□ -1.13
SYNE2-216ENST00000555002 CFAP58Q5T655 872 aa7.96□□□□□ -1.13
SYNE2-216ENST00000555002 ATP2B3Q16720 1220 aa7.96□□□□□ -1.13
SYNE2-216ENST00000555002 BIN2Q9UBW5 565 aaPredicted RBP7.96□□□□□ -1.13
SYNE2-216ENST00000555002 SLU7O95391 586 aaKnown RBP7.96□□□□□ -1.13
SYNE2-216ENST00000555002 TDRD12Q587J7 1177 aaKnown RBP7.96□□□□□ -1.13
SYNE2-216ENST00000555002 ZNF287Q9HBT7 754 aa7.96□□□□□ -1.13
SYNE2-216ENST00000555002 ODF2LQ9ULJ1 636 aa7.96□□□□□ -1.13
SYNE2-216ENST00000555002 MCM2P49736 904 aa7.96□□□□□ -1.14
SYNE2-216ENST00000555002 TPD52P55327 224 aaPredicted RBP7.96□□□□□ -1.14
SYNE2-216ENST00000555002 UTP14AQ9BVJ6 771 aaKnown RBP7.96□□□□□ -1.14
SYNE2-216ENST00000555002 PRDM10Q9NQV6 1147 aa7.96□□□□□ -1.14
SYNE2-216ENST00000555002 ANAPC4Q9UJX5 808 aa7.96□□□□□ -1.14
SYNE2-216ENST00000555002 VAT1LQ9HCJ6 419 aa7.96□□□□□ -1.14
SYNE2-216ENST00000555002 TMEM110-MUSTN1A8MSY1 372 aa7.96□□□□□ -1.14
SYNE2-216ENST00000555002 ZNF652Q9Y2D9 606 aa7.96□□□□□ -1.14
SYNE2-216ENST00000555002 GPATCH11Q8N954 259 aa7.96□□□□□ -1.14
SYNE2-216ENST00000555002 ALS2CR12Q96Q35 445 aa7.96□□□□□ -1.14
SYNE2-216ENST00000555002 TAOK3Q9H2K8 898 aa7.96□□□□□ -1.14
SYNE2-216ENST00000555002 PRKCSHP14314 528 aaPredicted RBP7.96□□□□□ -1.14
SYNE2-216ENST00000555002 CAVIN4Q5BKX8 364 aa7.96□□□□□ -1.14
SYNE2-216ENST00000555002 NLRP5P59047 1200 aa7.96□□□□□ -1.14
SYNE2-216ENST00000555002 ACTN2P35609 894 aa7.95□□□□□ -1.14
SYNE2-216ENST00000555002 TWISTNBQ3B726 338 aaPredicted RBP7.95□□□□□ -1.14
SYNE2-216ENST00000555002 C6orf163Q5TEZ5 329 aa7.95□□□□□ -1.14
SYNE2-216ENST00000555002 CPLX3Q8WVH0 158 aa7.95□□□□□ -1.14
SYNE2-216ENST00000555002 UBXN4Q92575 508 aa7.95□□□□□ -1.14
SYNE2-216ENST00000555002 CCT4P50991 539 aaKnown RBP7.95□□□□□ -1.14
SYNE2-216ENST00000555002 CETN1Q12798 172 aa7.95□□□□□ -1.14
SYNE2-216ENST00000555002 MPHOSPH6Q99547 160 aaKnown RBP7.95□□□□□ -1.14
SYNE2-216ENST00000555002 TTC36A6NLP5 189 aa7.95□□□□□ -1.14
SYNE2-216ENST00000555002 ADAMTS2O95450 1211 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms