RNA–Protein interactions for RNA: ENST00000554768.5

MTHFD1-209, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 4

Gene MTHFD1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-209ENST00000554768 SLC4A9Q96Q91 983 aa17.14■□□□□ 0.33
MTHFD1-209ENST00000554768 PDGFDQ9GZP0 370 aaPredicted RBP17.14■□□□□ 0.33
MTHFD1-209ENST00000554768 ADAMTS8Q9UP79 889 aa17.14■□□□□ 0.33
MTHFD1-209ENST00000554768 HTATSF1O43719 755 aaKnown RBP17.13■□□□□ 0.33
MTHFD1-209ENST00000554768 NEFMP07197 916 aa17.13■□□□□ 0.33
MTHFD1-209ENST00000554768 HMGB2P26583 209 aaKnown RBP17.13■□□□□ 0.33
MTHFD1-209ENST00000554768 ITPK1Q13572 414 aa17.13■□□□□ 0.33
MTHFD1-209ENST00000554768 WDR43Q15061 677 aaKnown RBP eCLIP17.13■□□□□ 0.33
MTHFD1-209ENST00000554768 CCDC184Q52MB2 194 aa17.13■□□□□ 0.33
MTHFD1-209ENST00000554768 PAPPAQ13219 1627 aa17.12■□□□□ 0.33
MTHFD1-209ENST00000554768 ATP6V1AP38606 617 aa17.12■□□□□ 0.33
MTHFD1-209ENST00000554768 NFE2L2Q16236 605 aa17.12■□□□□ 0.33
MTHFD1-209ENST00000554768 RBM42Q9BTD8 480 aaKnown RBP17.12■□□□□ 0.33
MTHFD1-209ENST00000554768 LY75O60449 1722 aa17.12■□□□□ 0.33
MTHFD1-209ENST00000554768 CEMIPQ8WUJ3 1361 aa17.12■□□□□ 0.33
MTHFD1-209ENST00000554768 ADAMTS7Q9UKP4 1686 aa17.11■□□□□ 0.33
MTHFD1-209ENST00000554768 PTCD1O75127 700 aaKnown RBP17.11■□□□□ 0.33
MTHFD1-209ENST00000554768 TEFQ10587 303 aa17.11■□□□□ 0.33
MTHFD1-209ENST00000554768 MCM10Q7L590 875 aa17.11■□□□□ 0.33
MTHFD1-209ENST00000554768 RTF1Q92541 710 aaKnown RBP17.11■□□□□ 0.33
MTHFD1-209ENST00000554768 TFCP2L1Q9NZI6 479 aa17.11■□□□□ 0.33
MTHFD1-209ENST00000554768 MRC1P22897 1456 aa17.11■□□□□ 0.33
MTHFD1-209ENST00000554768 SLC39A6Q13433 755 aa17.1■□□□□ 0.33
MTHFD1-209ENST00000554768 DCTN1Q14203 1278 aa17.1■□□□□ 0.33
MTHFD1-209ENST00000554768 LINC00116Q8NCU8 138 aa17.1■□□□□ 0.33
MTHFD1-209ENST00000554768 MAPK8IP3Q9UPT6 1336 aa17.1■□□□□ 0.33
MTHFD1-209ENST00000554768 SCN11AQ9UI33 1791 aa17.09■□□□□ 0.33
MTHFD1-209ENST00000554768 PNPLA7Q6ZV29 1317 aa17.08■□□□□ 0.32
MTHFD1-209ENST00000554768 CCDC146Q8IYE0 955 aa17.08■□□□□ 0.32
MTHFD1-209ENST00000554768 RUNDC1Q96C34 613 aa17.08■□□□□ 0.32
MTHFD1-209ENST00000554768 TMPOP42166 694 aaKnown RBP17.07■□□□□ 0.32
MTHFD1-209ENST00000554768 PNISRQ8TF01 805 aaKnown RBP17.07■□□□□ 0.32
MTHFD1-209ENST00000554768 RIPK4P57078 832 aa17.06■□□□□ 0.32
MTHFD1-209ENST00000554768 ZNF790Q6PG37 636 aa17.06■□□□□ 0.32
MTHFD1-209ENST00000554768 BTBD11A6QL63 1104 aa17.05■□□□□ 0.32
MTHFD1-209ENST00000554768 ZBTB7AO95365 584 aa17.05■□□□□ 0.32
MTHFD1-209ENST00000554768 AMIGO3Q86WK7 504 aa17.05■□□□□ 0.32
MTHFD1-209ENST00000554768 COL23A1Q86Y22 540 aaPredicted RBP17.05■□□□□ 0.32
MTHFD1-209ENST00000554768 AK7Q96M32 723 aa17.05■□□□□ 0.32
MTHFD1-209ENST00000554768 TAF7Q15545 349 aaPredicted RBP17.04■□□□□ 0.32
MTHFD1-209ENST00000554768 RC3H1Q5TC82 1133 aaKnown RBP17.04■□□□□ 0.32
MTHFD1-209ENST00000554768 TTC5Q8N0Z6 440 aa17.04■□□□□ 0.32
MTHFD1-209ENST00000554768 VSIG10Q8N0Z9 540 aa17.04■□□□□ 0.32
MTHFD1-209ENST00000554768 ZNF496Q96IT1 587 aaPredicted RBP17.04■□□□□ 0.32
MTHFD1-209ENST00000554768 SPON1Q9HCB6 807 aa17.04■□□□□ 0.32
MTHFD1-209ENST00000554768 MRS2Q9HD23 443 aa17.04■□□□□ 0.32
MTHFD1-209ENST00000554768 RRP7AQ9Y3A4 280 aaKnown RBP17.04■□□□□ 0.32
MTHFD1-209ENST00000554768 KCNQ3O43525 872 aa17.03■□□□□ 0.32
MTHFD1-209ENST00000554768 SMIM5Q71RC9 77 aa17.03■□□□□ 0.32
MTHFD1-209ENST00000554768 DNAJC10Q8IXB1 793 aa17.03■□□□□ 0.32
MTHFD1-209ENST00000554768 FLAD1Q8NFF5 587 aa17.03■□□□□ 0.32
MTHFD1-209ENST00000554768 SLC16A10Q8TF71 515 aa17.03■□□□□ 0.32
MTHFD1-209ENST00000554768 THUMPD2Q9BTF0 503 aaKnown RBP17.03■□□□□ 0.32
MTHFD1-209ENST00000554768 MTFR1LQ9H019 292 aa17.03■□□□□ 0.32
MTHFD1-209ENST00000554768 ATF5Q9Y2D1 282 aaPredicted RBP17.03■□□□□ 0.32
MTHFD1-209ENST00000554768 KCPQ6ZWJ8 1503 aa17.01■□□□□ 0.31
MTHFD1-209ENST00000554768 CNTNAP4Q9C0A0 1308 aa17.01■□□□□ 0.31
MTHFD1-209ENST00000554768 C5P01031 1676 aa17.01■□□□□ 0.31
MTHFD1-209ENST00000554768 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.01■□□□□ 0.31
MTHFD1-209ENST00000554768 GNPATO15228 680 aa17.01■□□□□ 0.31
MTHFD1-209ENST00000554768 SSFA2P28290 1259 aa17.01■□□□□ 0.31
MTHFD1-209ENST00000554768 PTGER2P43116 358 aa17.01■□□□□ 0.31
MTHFD1-209ENST00000554768 NEUROD2Q15784 382 aa17.01■□□□□ 0.31
MTHFD1-209ENST00000554768 MIS18AQ9NYP9 233 aa17.01■□□□□ 0.31
MTHFD1-209ENST00000554768 TRIM35Q9UPQ4 493 aa17.01■□□□□ 0.31
MTHFD1-209ENST00000554768 CASZ1Q86V15 1759 aa17.01■□□□□ 0.31
MTHFD1-209ENST00000554768 C4BP0C0L5 1744 aa17.01■□□□□ 0.31
MTHFD1-209ENST00000554768 ZNF831Q5JPB2 1677 aa17.01■□□□□ 0.31
MTHFD1-209ENST00000554768 MSH5O43196 834 aa17■□□□□ 0.31
MTHFD1-209ENST00000554768 RPS6KA4O75676 772 aa17■□□□□ 0.31
MTHFD1-209ENST00000554768 CYP19A1P11511 503 aaPredicted RBP17■□□□□ 0.31
MTHFD1-209ENST00000554768 CRKLP46109 303 aaKnown RBP17■□□□□ 0.31
MTHFD1-209ENST00000554768 INTS5Q6P9B9 1019 aaKnown RBP17■□□□□ 0.31
MTHFD1-209ENST00000554768 FMNL2Q96PY5 1086 aa17■□□□□ 0.31
MTHFD1-209ENST00000554768 APAF1O14727 1248 aa16.99■□□□□ 0.31
MTHFD1-209ENST00000554768 PHF14O94880 888 aa16.99■□□□□ 0.31
MTHFD1-209ENST00000554768 LMOD3Q0VAK6 560 aa16.99■□□□□ 0.31
MTHFD1-209ENST00000554768 SGIP1Q9BQI5 828 aa16.99■□□□□ 0.31
MTHFD1-209ENST00000554768 RTCBQ9Y3I0 505 aaKnown RBP16.99■□□□□ 0.31
MTHFD1-209ENST00000554768 HEG1Q9ULI3 1381 aa16.99■□□□□ 0.31
MTHFD1-209ENST00000554768 TRAPPC3LQ5T215 181 aa16.98■□□□□ 0.31
MTHFD1-209ENST00000554768 TEX13AQ9BXU3 409 aaPredicted RBP16.98■□□□□ 0.31
MTHFD1-209ENST00000554768 TAF1LQ8IZX4 1826 aa16.98■□□□□ 0.31
MTHFD1-209ENST00000554768 STARD3NLO95772 234 aa16.97■□□□□ 0.31
MTHFD1-209ENST00000554768 CCDC87Q9NVE4 849 aa16.97■□□□□ 0.31
MTHFD1-209ENST00000554768 SIPA1L3O60292 1781 aaPredicted RBP16.97■□□□□ 0.31
MTHFD1-209ENST00000554768 LRP5O75197 1615 aa16.96■□□□□ 0.31
MTHFD1-209ENST00000554768 ADRA2BP18089 450 aa16.96■□□□□ 0.31
MTHFD1-209ENST00000554768 ARHGEF1Q92888 912 aaKnown RBP16.96■□□□□ 0.31
MTHFD1-209ENST00000554768 BABAM1Q9NWV8 329 aa16.95■□□□□ 0.3
MTHFD1-209ENST00000554768 QSER1Q2KHR3 1735 aa16.95■□□□□ 0.3
MTHFD1-209ENST00000554768 VIRMAQ69YN4 1812 aaKnown RBP16.94■□□□□ 0.3
MTHFD1-209ENST00000554768 PRAMEF22A3QJZ6 481 aa16.94■□□□□ 0.3
MTHFD1-209ENST00000554768 SNRPA1P09661 255 aaKnown RBP16.94■□□□□ 0.3
MTHFD1-209ENST00000554768 EIF4A1P60842 406 aaKnown RBP16.94■□□□□ 0.3
MTHFD1-209ENST00000554768 ZBTB1Q9Y2K1 713 aa16.94■□□□□ 0.3
MTHFD1-209ENST00000554768 USP16Q9Y5T5 823 aa16.94■□□□□ 0.3
MTHFD1-209ENST00000554768 CICQ96RK0 1608 aaPredicted RBP16.94■□□□□ 0.3
MTHFD1-209ENST00000554768 TJP1Q07157 1748 aa16.93■□□□□ 0.3
MTHFD1-209ENST00000554768 UBR2Q8IWV8 1755 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms