RNA–Protein interactions for RNA: ENST00000553830.1

PRKCH-206, Transcript of protein kinase C eta, humanhuman

TSL 5

Gene PRKCH, Length 514 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-206ENST00000553830 TSPYL4Q9UJ04 414 aa18.35■□□□□ 0.53
PRKCH-206ENST00000553830 KDM3BQ7LBC6 1761 aa18.35■□□□□ 0.53
PRKCH-206ENST00000553830 TAF7Q15545 349 aaPredicted RBP18.34■□□□□ 0.53
PRKCH-206ENST00000553830 DUSP27Q5VZP5 1158 aa18.34■□□□□ 0.53
PRKCH-206ENST00000553830 SYTL4Q96C24 671 aaPredicted RBP18.34■□□□□ 0.53
PRKCH-206ENST00000553830 ACSBG1Q96GR2 724 aa18.34■□□□□ 0.53
PRKCH-206ENST00000553830 NKX1-1Q15270 411 aaPredicted RBP18.33■□□□□ 0.52
PRKCH-206ENST00000553830 CFAP44Q96MT7 982 aa18.33■□□□□ 0.52
PRKCH-206ENST00000553830 SLC52A2Q9HAB3 445 aa18.33■□□□□ 0.52
PRKCH-206ENST00000553830 BTBD11A6QL63 1104 aa18.32■□□□□ 0.52
PRKCH-206ENST00000553830 NFATC2IPQ8NCF5 419 aa18.32■□□□□ 0.52
PRKCH-206ENST00000553830 MRC1P22897 1456 aa18.32■□□□□ 0.52
PRKCH-206ENST00000553830 ONECUT3O60422 494 aaPredicted RBP18.31■□□□□ 0.52
PRKCH-206ENST00000553830 ZNF853P0CG23 659 aa18.31■□□□□ 0.52
PRKCH-206ENST00000553830 EXOSC9Q06265 439 aaKnown RBP18.31■□□□□ 0.52
PRKCH-206ENST00000553830 CHL1O00533 1208 aa18.3■□□□□ 0.52
PRKCH-206ENST00000553830 KCNQ3O43525 872 aa18.3■□□□□ 0.52
PRKCH-206ENST00000553830 SLC39A6Q13433 755 aa18.3■□□□□ 0.52
PRKCH-206ENST00000553830 TRMT2AQ8IZ69 625 aaKnown RBP18.3■□□□□ 0.52
PRKCH-206ENST00000553830 TMOD3Q9NYL9 352 aa18.3■□□□□ 0.52
PRKCH-206ENST00000553830 RGS12O14924 1447 aa18.3■□□□□ 0.52
PRKCH-206ENST00000553830 SBF2Q86WG5 1849 aa18.3■□□□□ 0.52
PRKCH-206ENST00000553830 ERVV-2B6SEH9 535 aa18.29■□□□□ 0.52
PRKCH-206ENST00000553830 ELL2O00472 640 aaPredicted RBP18.29■□□□□ 0.52
PRKCH-206ENST00000553830 PRIM1P49642 420 aaKnown RBP18.29■□□□□ 0.52
PRKCH-206ENST00000553830 KRT24Q2M2I5 525 aa18.28■□□□□ 0.52
PRKCH-206ENST00000553830 KRT27Q7Z3Y8 459 aa18.28■□□□□ 0.52
PRKCH-206ENST00000553830 PAPPAQ13219 1627 aa18.27■□□□□ 0.51
PRKCH-206ENST00000553830 TTC5Q8N0Z6 440 aa18.26■□□□□ 0.51
PRKCH-206ENST00000553830 NHSQ6T4R5 1651 aa18.25■□□□□ 0.51
PRKCH-206ENST00000553830 TSPYL6Q8N831 410 aa18.25■□□□□ 0.51
PRKCH-206ENST00000553830 C8orf58Q8NAV2 365 aa18.25■□□□□ 0.51
PRKCH-206ENST00000553830 PIGBQ92521 554 aa18.25■□□□□ 0.51
PRKCH-206ENST00000553830 BTAF1O14981 1849 aa18.25■□□□□ 0.51
PRKCH-206ENST00000553830 KCNQ2O43526 872 aa18.24■□□□□ 0.51
PRKCH-206ENST00000553830 C5P01031 1676 aa18.24■□□□□ 0.51
PRKCH-206ENST00000553830 UBR2Q8IWV8 1755 aa18.24■□□□□ 0.51
PRKCH-206ENST00000553830 ZNF790Q6PG37 636 aa18.23■□□□□ 0.51
PRKCH-206ENST00000553830 BABAM1Q9NWV8 329 aa18.23■□□□□ 0.51
PRKCH-206ENST00000553830 BCL9O00512 1426 aa18.23■□□□□ 0.51
PRKCH-206ENST00000553830 TCERG1O14776 1098 aaKnown RBP18.22■□□□□ 0.51
PRKCH-206ENST00000553830 EIF4A1P60842 406 aaKnown RBP18.22■□□□□ 0.51
PRKCH-206ENST00000553830 TWISTNBQ3B726 338 aaPredicted RBP18.22■□□□□ 0.51
PRKCH-206ENST00000553830 NECTIN2Q92692 538 aa18.22■□□□□ 0.51
PRKCH-206ENST00000553830 RCAN3Q9UKA8 241 aa18.22■□□□□ 0.51
PRKCH-206ENST00000553830 ASAP1Q9ULH1 1129 aa18.22■□□□□ 0.51
PRKCH-206ENST00000553830 PTCD1O75127 700 aaKnown RBP18.21■□□□□ 0.51
PRKCH-206ENST00000553830 PTF1AQ7RTS3 328 aa18.21■□□□□ 0.51
PRKCH-206ENST00000553830 ZNF496Q96IT1 587 aaPredicted RBP18.2■□□□□ 0.5
PRKCH-206ENST00000553830 RBM42Q9BTD8 480 aaKnown RBP18.2■□□□□ 0.5
PRKCH-206ENST00000553830 BCL2L13Q9BXK5 485 aa18.2■□□□□ 0.5
PRKCH-206ENST00000553830 KCPQ6ZWJ8 1503 aa18.19■□□□□ 0.5
PRKCH-206ENST00000553830 FAM196AQ6ZSG2 479 aa18.19■□□□□ 0.5
PRKCH-206ENST00000553830 ATG3Q9NT62 314 aa18.19■□□□□ 0.5
PRKCH-206ENST00000553830 LAMB4A4D0S4 1761 aa18.18■□□□□ 0.5
PRKCH-206ENST00000553830 PRAMEF22A3QJZ6 481 aa18.18■□□□□ 0.5
PRKCH-206ENST00000553830 VAMP4O75379 141 aa18.18■□□□□ 0.5
PRKCH-206ENST00000553830 EIF2S2P20042 333 aaKnown RBP18.18■□□□□ 0.5
PRKCH-206ENST00000553830 FMNL2Q96PY5 1086 aa18.18■□□□□ 0.5
PRKCH-206ENST00000553830 TRIM37O94972 964 aa18.17■□□□□ 0.5
PRKCH-206ENST00000553830 SUPT16HQ9Y5B9 1047 aaKnown RBP18.17■□□□□ 0.5
PRKCH-206ENST00000553830 BCAR3O75815 825 aa18.15■□□□□ 0.5
PRKCH-206ENST00000553830 CT47B1P0C2W7 299 aaPredicted RBP18.15■□□□□ 0.5
PRKCH-206ENST00000553830 RARSP54136 660 aaKnown RBP18.15■□□□□ 0.5
PRKCH-206ENST00000553830 SMC4Q9NTJ3 1288 aa18.15■□□□□ 0.5
PRKCH-206ENST00000553830 PALLDQ8WX93 1383 aa18.15■□□□□ 0.5
PRKCH-206ENST00000553830 HEG1Q9ULI3 1381 aa18.15■□□□□ 0.5
PRKCH-206ENST00000553830 GIGYF1O75420 1035 aaPredicted RBP18.14■□□□□ 0.49
PRKCH-206ENST00000553830 HDGFL1Q5TGJ6 251 aa18.14■□□□□ 0.49
PRKCH-206ENST00000553830 SSH1Q8WYL5 1049 aa18.14■□□□□ 0.49
PRKCH-206ENST00000553830 TJP1Q07157 1748 aa18.14■□□□□ 0.49
PRKCH-206ENST00000553830 SNRPA1P09661 255 aaKnown RBP18.13■□□□□ 0.49
PRKCH-206ENST00000553830 CACNA1FO60840 1977 aa18.13■□□□□ 0.49
PRKCH-206ENST00000553830 CANXP27824 592 aaKnown RBP18.12■□□□□ 0.49
PRKCH-206ENST00000553830 FRAT1Q92837 279 aaPredicted RBP18.12■□□□□ 0.49
PRKCH-206ENST00000553830 SMARCC1Q92922 1105 aaPredicted RBP18.12■□□□□ 0.49
PRKCH-206ENST00000553830 BCL11BQ9C0K0 894 aaPredicted RBP18.12■□□□□ 0.49
PRKCH-206ENST00000553830 PLIN1O60240 522 aa18.11■□□□□ 0.49
PRKCH-206ENST00000553830 DNAJC10Q8IXB1 793 aa18.11■□□□□ 0.49
PRKCH-206ENST00000553830 USP16Q9Y5T5 823 aa18.11■□□□□ 0.49
PRKCH-206ENST00000553830 LY75O60449 1722 aa18.1■□□□□ 0.49
PRKCH-206ENST00000553830 TNS1Q9HBL0 1735 aaKnown RBP18.1■□□□□ 0.49
PRKCH-206ENST00000553830 ANXA1P04083 346 aa18.1■□□□□ 0.49
PRKCH-206ENST00000553830 HOXB7P09629 217 aa18.1■□□□□ 0.49
PRKCH-206ENST00000553830 PIP4K2AP48426 406 aaPredicted RBP18.1■□□□□ 0.49
PRKCH-206ENST00000553830 KCNQ4P56696 695 aa18.1■□□□□ 0.49
PRKCH-206ENST00000553830 CCDC30Q5VVM6 783 aa18.1■□□□□ 0.49
PRKCH-206ENST00000553830 STK31Q9BXU1 1019 aa18.1■□□□□ 0.49
PRKCH-206ENST00000553830 LOC102724428A0A0B4J2F2 783 aa18.09■□□□□ 0.49
PRKCH-206ENST00000553830 ATP6V1AP38606 617 aa18.09■□□□□ 0.49
PRKCH-206ENST00000553830 SIK1P57059 783 aa18.09■□□□□ 0.49
PRKCH-206ENST00000553830 IRX6P78412 446 aaPredicted RBP18.09■□□□□ 0.49
PRKCH-206ENST00000553830 MRPL50Q8N5N7 158 aaKnown RBP18.09■□□□□ 0.49
PRKCH-206ENST00000553830 SLC4A9Q96Q91 983 aa18.09■□□□□ 0.49
PRKCH-206ENST00000553830 CHPF2Q9P2E5 772 aa18.09■□□□□ 0.49
PRKCH-206ENST00000553830 SOS1Q07889 1333 aaPredicted RBP18.08■□□□□ 0.49
PRKCH-206ENST00000553830 RRP1P56182 461 aaKnown RBP18.08■□□□□ 0.48
PRKCH-206ENST00000553830 ALDH1L2Q3SY69 923 aa18.08■□□□□ 0.48
PRKCH-206ENST00000553830 SLC4A2P04920 1241 aa18.07■□□□□ 0.48
PRKCH-206ENST00000553830 ZNF428Q96B54 188 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 181.9 ms