RNA–Protein interactions for RNA: ENST00000553751.1

FOXA1-203, Transcript of forkhead box A1, humanhuman

TSL 4

Gene FOXA1, Length 507 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-203ENST00000553751 C4BP0C0L5 1744 aa27.24■■□□□ 1.95
FOXA1-203ENST00000553751 MAP3K5Q99683 1374 aa27.23■■□□□ 1.95
FOXA1-203ENST00000553751 PNPLA7Q6ZV29 1317 aa27.23■■□□□ 1.95
FOXA1-203ENST00000553751 RNMTO43148 476 aaKnown RBP27.23■■□□□ 1.95
FOXA1-203ENST00000553751 FCHSD2O94868 740 aa27.23■■□□□ 1.95
FOXA1-203ENST00000553751 NFATC2IPQ8NCF5 419 aa27.23■■□□□ 1.95
FOXA1-203ENST00000553751 MYBBP1AQ9BQG0 1328 aaKnown RBP27.22■■□□□ 1.95
FOXA1-203ENST00000553751 ZNF831Q5JPB2 1677 aa27.22■■□□□ 1.95
FOXA1-203ENST00000553751 SPON1Q9HCB6 807 aa27.22■■□□□ 1.95
FOXA1-203ENST00000553751 TFCP2L1Q9NZI6 479 aa27.22■■□□□ 1.95
FOXA1-203ENST00000553751 ZBTB7AO95365 584 aa27.21■■□□□ 1.95
FOXA1-203ENST00000553751 SLC52A2Q9HAB3 445 aa27.21■■□□□ 1.95
FOXA1-203ENST00000553751 ZNF316A6NFI3 1004 aaPredicted RBP27.19■■□□□ 1.94
FOXA1-203ENST00000553751 HMGB2P26583 209 aaKnown RBP27.19■■□□□ 1.94
FOXA1-203ENST00000553751 ITPK1Q13572 414 aa27.19■■□□□ 1.94
FOXA1-203ENST00000553751 ATP6V1AP38606 617 aa27.18■■□□□ 1.94
FOXA1-203ENST00000553751 LINC00116Q8NCU8 138 aa27.18■■□□□ 1.94
FOXA1-203ENST00000553751 SLC4A9Q96Q91 983 aa27.18■■□□□ 1.94
FOXA1-203ENST00000553751 GNAT3A8MTJ3 354 aa27.17■■□□□ 1.94
FOXA1-203ENST00000553751 MTFR1LQ9H019 292 aa27.17■■□□□ 1.94
FOXA1-203ENST00000553751 PRKRIP1Q9H875 184 aaPredicted RBP27.17■■□□□ 1.94
FOXA1-203ENST00000553751 PTGER2P43116 358 aa27.15■■□□□ 1.94
FOXA1-203ENST00000553751 RBM42Q9BTD8 480 aaKnown RBP27.15■■□□□ 1.94
FOXA1-203ENST00000553751 COL5A3P25940 1745 aaPredicted RBP27.15■■□□□ 1.94
FOXA1-203ENST00000553751 CICQ96RK0 1608 aaPredicted RBP27.15■■□□□ 1.94
FOXA1-203ENST00000553751 UBR3Q6ZT12 1888 aa27.15■■□□□ 1.94
FOXA1-203ENST00000553751 IL17REQ8NFR9 667 aa27.14■■□□□ 1.94
FOXA1-203ENST00000553751 ATF5Q9Y2D1 282 aaPredicted RBP27.14■■□□□ 1.94
FOXA1-203ENST00000553751 CEMIPQ8WUJ3 1361 aa27.13■■□□□ 1.93
FOXA1-203ENST00000553751 SIPA1L3O60292 1781 aaPredicted RBP27.13■■□□□ 1.93
FOXA1-203ENST00000553751 AK7Q96M32 723 aa27.13■■□□□ 1.93
FOXA1-203ENST00000553751 AMIGO3Q86WK7 504 aa27.12■■□□□ 1.93
FOXA1-203ENST00000553751 SLC16A10Q8TF71 515 aa27.12■■□□□ 1.93
FOXA1-203ENST00000553751 SGIP1Q9BQI5 828 aa27.12■■□□□ 1.93
FOXA1-203ENST00000553751 TJP1Q07157 1748 aa27.12■■□□□ 1.93
FOXA1-203ENST00000553751 COL24A1Q17RW2 1714 aa27.12■■□□□ 1.93
FOXA1-203ENST00000553751 KCPQ6ZWJ8 1503 aa27.11■■□□□ 1.93
FOXA1-203ENST00000553751 PTCD1O75127 700 aaKnown RBP27.11■■□□□ 1.93
FOXA1-203ENST00000553751 COL23A1Q86Y22 540 aaPredicted RBP27.11■■□□□ 1.93
FOXA1-203ENST00000553751 PLEKHF1Q96S99 279 aa27.11■■□□□ 1.93
FOXA1-203ENST00000553751 UBR2Q8IWV8 1755 aa27.09■■□□□ 1.93
FOXA1-203ENST00000553751 SLC39A6Q13433 755 aa27.09■■□□□ 1.93
FOXA1-203ENST00000553751 FLAD1Q8NFF5 587 aa27.08■■□□□ 1.93
FOXA1-203ENST00000553751 TEFQ10587 303 aa27.07■■□□□ 1.92
FOXA1-203ENST00000553751 PPP1R1BQ9UD71 204 aaPredicted RBP27.07■■□□□ 1.92
FOXA1-203ENST00000553751 GNPATO15228 680 aa27.06■■□□□ 1.92
FOXA1-203ENST00000553751 SSFA2P28290 1259 aa27.06■■□□□ 1.92
FOXA1-203ENST00000553751 SMIM5Q71RC9 77 aa27.06■■□□□ 1.92
FOXA1-203ENST00000553751 CNTNAP4Q9C0A0 1308 aa27.06■■□□□ 1.92
FOXA1-203ENST00000553751 MSH5O43196 834 aa27.05■■□□□ 1.92
FOXA1-203ENST00000553751 PHF14O94880 888 aa27.05■■□□□ 1.92
FOXA1-203ENST00000553751 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP27.04■■□□□ 1.92
FOXA1-203ENST00000553751 NEFMP07197 916 aa27.04■■□□□ 1.92
FOXA1-203ENST00000553751 MCM10Q7L590 875 aa27.04■■□□□ 1.92
FOXA1-203ENST00000553751 DLG5Q8TDM6 1919 aa27.04■■□□□ 1.92
FOXA1-203ENST00000553751 MYH14Q7Z406 1995 aaKnown RBP27.04■■□□□ 1.92
FOXA1-203ENST00000553751 HTATSF1O43719 755 aaKnown RBP27.03■■□□□ 1.92
FOXA1-203ENST00000553751 RC3H1Q5TC82 1133 aaKnown RBP27.03■■□□□ 1.92
FOXA1-203ENST00000553751 RTF1Q92541 710 aaKnown RBP27.03■■□□□ 1.92
FOXA1-203ENST00000553751 PNNQ9H307 717 aaKnown RBP27.03■■□□□ 1.92
FOXA1-203ENST00000553751 MAPK8IP3Q9UPT6 1336 aa27.01■■□□□ 1.91
FOXA1-203ENST00000553751 DCTN1Q14203 1278 aa27.01■■□□□ 1.91
FOXA1-203ENST00000553751 NFE2L2Q16236 605 aa27■■□□□ 1.91
FOXA1-203ENST00000553751 ZNF790Q6PG37 636 aa27■■□□□ 1.91
FOXA1-203ENST00000553751 TTC5Q8N0Z6 440 aa27■■□□□ 1.91
FOXA1-203ENST00000553751 CRKLP46109 303 aaKnown RBP26.99■■□□□ 1.91
FOXA1-203ENST00000553751 DNAJC10Q8IXB1 793 aa26.99■■□□□ 1.91
FOXA1-203ENST00000553751 MSL1Q68DK7 614 aa26.98■■□□□ 1.91
FOXA1-203ENST00000553751 VSIG10Q8N0Z9 540 aa26.98■■□□□ 1.91
FOXA1-203ENST00000553751 ARXQ96QS3 562 aa26.98■■□□□ 1.91
FOXA1-203ENST00000553751 RTCBQ9Y3I0 505 aaKnown RBP26.98■■□□□ 1.91
FOXA1-203ENST00000553751 BTBD11A6QL63 1104 aa26.97■■□□□ 1.91
FOXA1-203ENST00000553751 RPS6KA4O75676 772 aa26.97■■□□□ 1.91
FOXA1-203ENST00000553751 POLD1P28340 1107 aa26.97■■□□□ 1.91
FOXA1-203ENST00000553751 WDR43Q15061 677 aaKnown RBP eCLIP26.97■■□□□ 1.91
FOXA1-203ENST00000553751 ZNF496Q96IT1 587 aaPredicted RBP26.97■■□□□ 1.91
FOXA1-203ENST00000553751 C4AP0C0L4 1744 aa26.96■■□□□ 1.91
FOXA1-203ENST00000553751 ADRA2BP18089 450 aa26.95■■□□□ 1.9
FOXA1-203ENST00000553751 INTS5Q6P9B9 1019 aaKnown RBP26.95■■□□□ 1.9
FOXA1-203ENST00000553751 HEG1Q9ULI3 1381 aa26.95■■□□□ 1.9
FOXA1-203ENST00000553751 CYP19A1P11511 503 aaPredicted RBP26.94■■□□□ 1.9
FOXA1-203ENST00000553751 TRAPPC3LQ5T215 181 aa26.94■■□□□ 1.9
FOXA1-203ENST00000553751 FHDC1Q9C0D6 1143 aaPredicted RBP26.94■■□□□ 1.9
FOXA1-203ENST00000553751 KCNQ3O43525 872 aa26.93■■□□□ 1.9
FOXA1-203ENST00000553751 CCDC87Q9NVE4 849 aa26.93■■□□□ 1.9
FOXA1-203ENST00000553751 ADAMTS8Q9UP79 889 aa26.93■■□□□ 1.9
FOXA1-203ENST00000553751 CCDC146Q8IYE0 955 aa26.92■■□□□ 1.9
FOXA1-203ENST00000553751 ARHGEF1Q92888 912 aaKnown RBP26.92■■□□□ 1.9
FOXA1-203ENST00000553751 FMNL2Q96PY5 1086 aa26.91■■□□□ 1.9
FOXA1-203ENST00000553751 SYT17Q9BSW7 474 aa26.9■■□□□ 1.9
FOXA1-203ENST00000553751 THUMPD2Q9BTF0 503 aaKnown RBP26.9■■□□□ 1.9
FOXA1-203ENST00000553751 TMPOP42166 694 aaKnown RBP26.89■■□□□ 1.9
FOXA1-203ENST00000553751 TAF7Q15545 349 aaPredicted RBP26.89■■□□□ 1.9
FOXA1-203ENST00000553751 RUNDC1Q96C34 613 aa26.89■■□□□ 1.9
FOXA1-203ENST00000553751 KDM3BQ7LBC6 1761 aa26.89■■□□□ 1.89
FOXA1-203ENST00000553751 RIPK4P57078 832 aa26.88■■□□□ 1.89
FOXA1-203ENST00000553751 CCDC184Q52MB2 194 aa26.88■■□□□ 1.89
FOXA1-203ENST00000553751 ZBTB1Q9Y2K1 713 aa26.88■■□□□ 1.89
FOXA1-203ENST00000553751 SOS1Q07889 1333 aaPredicted RBP26.88■■□□□ 1.89
FOXA1-203ENST00000553751 ANP32CO43423 234 aa26.87■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 297.7 ms