RNA–Protein interactions for RNA: ENST00000552215.5

CHPT1-208, Transcript of choline phosphotransferase 1, humanhuman

TSL 1 (best)

Gene CHPT1, Length 4,342 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPT1-208ENST00000552215 STARD3NLO95772 234 aa10.24□□□□□ -0.77
CHPT1-208ENST00000552215 UBTFL1P0CB47 393 aaPredicted RBP10.24□□□□□ -0.77
CHPT1-208ENST00000552215 MED14O60244 1454 aa10.24□□□□□ -0.77
CHPT1-208ENST00000552215 KIF16BQ96L93 1317 aa10.23□□□□□ -0.77
CHPT1-208ENST00000552215 PCDH11XQ9BZA7 1347 aa10.23□□□□□ -0.77
CHPT1-208ENST00000552215 PCDH11YQ9BZA8 1340 aa10.23□□□□□ -0.77
CHPT1-208ENST00000552215 SLC52A2Q9HAB3 445 aa10.23□□□□□ -0.77
CHPT1-208ENST00000552215 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.23□□□□□ -0.77
CHPT1-208ENST00000552215 APBA3O96018 575 aa10.23□□□□□ -0.77
CHPT1-208ENST00000552215 SNRPA1P09661 255 aaKnown RBP10.23□□□□□ -0.77
CHPT1-208ENST00000552215 KIF6Q6ZMV9 814 aa10.23□□□□□ -0.77
CHPT1-208ENST00000552215 RWDD1Q9H446 243 aaPredicted RBP10.23□□□□□ -0.77
CHPT1-208ENST00000552215 DLC1Q96QB1 1528 aa10.23□□□□□ -0.77
CHPT1-208ENST00000552215 NEURL4Q96JN8 1562 aa10.23□□□□□ -0.77
CHPT1-208ENST00000552215 GORABQ5T7V8 394 aa10.22□□□□□ -0.77
CHPT1-208ENST00000552215 AATKQ6ZMQ8 1374 aa10.22□□□□□ -0.77
CHPT1-208ENST00000552215 PIGBQ92521 554 aa10.22□□□□□ -0.77
CHPT1-208ENST00000552215 SRCIN1Q9C0H9 1055 aa10.22□□□□□ -0.77
CHPT1-208ENST00000552215 IL1RAPL2Q9NP60 686 aa10.22□□□□□ -0.77
CHPT1-208ENST00000552215 TRPC5Q9UL62 973 aaPredicted RBP10.22□□□□□ -0.77
CHPT1-208ENST00000552215 EXOC6BQ9Y2D4 811 aa10.22□□□□□ -0.77
CHPT1-208ENST00000552215 PTF1AQ7RTS3 328 aa10.22□□□□□ -0.77
CHPT1-208ENST00000552215 TRIM6-TRIM34B2RNG4 842 aa10.22□□□□□ -0.77
CHPT1-208ENST00000552215 SURF6O75683 361 aaKnown RBP10.22□□□□□ -0.77
CHPT1-208ENST00000552215 DDX19BQ9UMR2 479 aa10.22□□□□□ -0.77
CHPT1-208ENST00000552215 LAMC1P11047 1609 aa10.22□□□□□ -0.77
CHPT1-208ENST00000552215 SMARCA5O60264 1052 aaPredicted RBP10.21□□□□□ -0.77
CHPT1-208ENST00000552215 RXRBP28702 533 aa10.21□□□□□ -0.77
CHPT1-208ENST00000552215 NEUROD6Q96NK8 337 aa10.21□□□□□ -0.77
CHPT1-208ENST00000552215 MEIS3Q99687 375 aa10.21□□□□□ -0.77
CHPT1-208ENST00000552215 CHL1O00533 1208 aa10.21□□□□□ -0.77
CHPT1-208ENST00000552215 MSL1Q68DK7 614 aa10.21□□□□□ -0.77
CHPT1-208ENST00000552215 UBE3BQ7Z3V4 1068 aa10.21□□□□□ -0.77
CHPT1-208ENST00000552215 GNPATO15228 680 aa10.21□□□□□ -0.78
CHPT1-208ENST00000552215 DBF4Q9UBU7 674 aaPredicted RBP10.21□□□□□ -0.78
CHPT1-208ENST00000552215 NRXN3Q9Y4C0 1643 aa10.21□□□□□ -0.78
CHPT1-208ENST00000552215 TFCP2L1Q9NZI6 479 aa10.21□□□□□ -0.78
CHPT1-208ENST00000552215 CCNL1Q9UK58 526 aaPredicted RBP10.21□□□□□ -0.78
CHPT1-208ENST00000552215 CDC42BPGQ6DT37 1551 aa10.2□□□□□ -0.78
CHPT1-208ENST00000552215 FRAT2O75474 233 aaPredicted RBP10.2□□□□□ -0.78
CHPT1-208ENST00000552215 MAP4K4O95819 1239 aaPredicted RBP10.2□□□□□ -0.78
CHPT1-208ENST00000552215 TSHZ3Q63HK5 1081 aa10.2□□□□□ -0.78
CHPT1-208ENST00000552215 GJD4Q96KN9 370 aaPredicted RBP10.2□□□□□ -0.78
CHPT1-208ENST00000552215 AK7Q96M32 723 aa10.2□□□□□ -0.78
CHPT1-208ENST00000552215 OVOS2A0A0J9YW53 1432 aa10.2□□□□□ -0.78
CHPT1-208ENST00000552215 OVOS2Q6IE36 1432 aa10.2□□□□□ -0.78
CHPT1-208ENST00000552215 A0A087WZG4 1122 aa10.2□□□□□ -0.78
CHPT1-208ENST00000552215 LRRFIP2Q9Y608 721 aaKnown RBP10.2□□□□□ -0.78
CHPT1-208ENST00000552215 JCADQ9P266 1359 aa10.2□□□□□ -0.78
CHPT1-208ENST00000552215 SRGAP3O43295 1099 aa10.19□□□□□ -0.78
CHPT1-208ENST00000552215 EIF4A1P60842 406 aaKnown RBP10.19□□□□□ -0.78
CHPT1-208ENST00000552215 TTLL7Q6ZT98 887 aa10.19□□□□□ -0.78
CHPT1-208ENST00000552215 RILPL2Q969X0 211 aa10.19□□□□□ -0.78
CHPT1-208ENST00000552215 MVPQ14764 893 aaKnown RBP10.19□□□□□ -0.78
CHPT1-208ENST00000552215 ANKRD13DQ6ZTN6 518 aa10.19□□□□□ -0.78
CHPT1-208ENST00000552215 SPRYD3Q8NCJ5 442 aa10.19□□□□□ -0.78
CHPT1-208ENST00000552215 ZPR1O75312 459 aa10.19□□□□□ -0.78
CHPT1-208ENST00000552215 MARCH10Q8NA82 808 aaPredicted RBP10.19□□□□□ -0.78
CHPT1-208ENST00000552215 DNAAF4Q8WXU2 420 aa10.19□□□□□ -0.78
CHPT1-208ENST00000552215 FBXW7Q969H0 707 aa10.19□□□□□ -0.78
CHPT1-208ENST00000552215 MRPL50Q8N5N7 158 aaKnown RBP10.19□□□□□ -0.78
CHPT1-208ENST00000552215 TRMT112Q9UI30 125 aaKnown RBP10.19□□□□□ -0.78
CHPT1-208ENST00000552215 RGPD8O14715 1765 aaPredicted RBP10.18□□□□□ -0.78
CHPT1-208ENST00000552215 KRT27Q7Z3Y8 459 aa10.18□□□□□ -0.78
CHPT1-208ENST00000552215 USP19O94966 1318 aa10.18□□□□□ -0.78
CHPT1-208ENST00000552215 KLHDC4Q8TBB5 520 aa10.18□□□□□ -0.78
CHPT1-208ENST00000552215 FAM89AQ96GI7 184 aa10.18□□□□□ -0.78
CHPT1-208ENST00000552215 RFC4P35249 363 aa10.17□□□□□ -0.78
CHPT1-208ENST00000552215 TPRNQ4KMQ1 711 aa10.17□□□□□ -0.78
CHPT1-208ENST00000552215 USP31Q70CQ4 1352 aa10.17□□□□□ -0.78
CHPT1-208ENST00000552215 PNPLA6Q8IY17 1366 aa10.17□□□□□ -0.78
CHPT1-208ENST00000552215 GIGYF1O75420 1035 aaPredicted RBP10.17□□□□□ -0.78
CHPT1-208ENST00000552215 CCDC27Q2M243 656 aa10.17□□□□□ -0.78
CHPT1-208ENST00000552215 PCDHB15Q9Y5E8 787 aa10.17□□□□□ -0.78
CHPT1-208ENST00000552215 KIAA1210Q9ULL0 1709 aa10.17□□□□□ -0.78
CHPT1-208ENST00000552215 HMMRO75330 724 aa10.16□□□□□ -0.78
CHPT1-208ENST00000552215 IGHDP01880 384 aa10.16□□□□□ -0.78
CHPT1-208ENST00000552215 NUTM1Q86Y26 1132 aa10.16□□□□□ -0.78
CHPT1-208ENST00000552215 ZBTB1Q9Y2K1 713 aa10.16□□□□□ -0.78
CHPT1-208ENST00000552215 FAM161AQ3B820 660 aa10.16□□□□□ -0.78
CHPT1-208ENST00000552215 DZIP3Q86Y13 1208 aaKnown RBP10.16□□□□□ -0.78
CHPT1-208ENST00000552215 PA2G4Q9UQ80 394 aaKnown RBP10.16□□□□□ -0.78
CHPT1-208ENST00000552215 CHMP4AQ9BY43 222 aa10.16□□□□□ -0.78
CHPT1-208ENST00000552215 LOC102724428A0A0B4J2F2 783 aa10.16□□□□□ -0.78
CHPT1-208ENST00000552215 GNAI2P04899 355 aa10.16□□□□□ -0.78
CHPT1-208ENST00000552215 HCLS1P14317 486 aaPredicted RBP10.16□□□□□ -0.78
CHPT1-208ENST00000552215 SIK1P57059 783 aa10.16□□□□□ -0.78
CHPT1-208ENST00000552215 NIP7Q9Y221 180 aaKnown RBP eCLIP10.16□□□□□ -0.78
CHPT1-208ENST00000552215 MFAP1P55081 439 aaKnown RBP10.15□□□□□ -0.78
CHPT1-208ENST00000552215 G3BP1Q13283 466 aaKnown RBP eCLIP10.15□□□□□ -0.78
CHPT1-208ENST00000552215 CHMP4BQ9H444 224 aaKnown RBP10.15□□□□□ -0.78
CHPT1-208ENST00000552215 IFT172Q9UG01 1749 aa10.15□□□□□ -0.78
CHPT1-208ENST00000552215 G3V3G9 751 aa10.15□□□□□ -0.79
CHPT1-208ENST00000552215 DCAF8Q5TAQ9 597 aa10.15□□□□□ -0.79
CHPT1-208ENST00000552215 DEFB132Q7Z7B7 95 aa10.14□□□□□ -0.79
CHPT1-208ENST00000552215 HELBQ8NG08 1087 aaPredicted RBP10.14□□□□□ -0.79
CHPT1-208ENST00000552215 PDZRN3Q9UPQ7 1066 aa10.14□□□□□ -0.79
CHPT1-208ENST00000552215 CDK12Q9NYV4 1490 aaPredicted RBP10.14□□□□□ -0.79
CHPT1-208ENST00000552215 SRCAPQ6ZRS2 3230 aa10.14□□□□□ -0.79
CHPT1-208ENST00000552215 KCNJ4P48050 445 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms