RNA–Protein interactions for RNA: ENST00000552213.1

CHPT1-207, Transcript of choline phosphotransferase 1, humanhuman

TSL 3

Gene CHPT1, Length 598 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPT1-207ENST00000552213 SLC27A3Q5K4L6 730 aa17.3■□□□□ 0.36
CHPT1-207ENST00000552213 PROM2Q8N271 834 aa17.3■□□□□ 0.36
CHPT1-207ENST00000552213 ATG3Q9NT62 314 aa17.3■□□□□ 0.36
CHPT1-207ENST00000552213 CCNL1Q9UK58 526 aaPredicted RBP17.3■□□□□ 0.36
CHPT1-207ENST00000552213 BTAF1O14981 1849 aa17.3■□□□□ 0.36
CHPT1-207ENST00000552213 CCER2I3L3R5 266 aa17.29■□□□□ 0.36
CHPT1-207ENST00000552213 LMOD3Q0VAK6 560 aa17.29■□□□□ 0.36
CHPT1-207ENST00000552213 NBPF14Q5TI25 921 aa17.29■□□□□ 0.36
CHPT1-207ENST00000552213 APAF1O14727 1248 aa17.28■□□□□ 0.36
CHPT1-207ENST00000552213 MIER1Q8N108 512 aa17.28■□□□□ 0.36
CHPT1-207ENST00000552213 RBM42Q9BTD8 480 aaKnown RBP17.28■□□□□ 0.36
CHPT1-207ENST00000552213 CEMIPQ8WUJ3 1361 aa17.28■□□□□ 0.36
CHPT1-207ENST00000552213 KCNQ4P56696 695 aa17.27■□□□□ 0.36
CHPT1-207ENST00000552213 LOC102724428A0A0B4J2F2 783 aa17.26■□□□□ 0.35
CHPT1-207ENST00000552213 PTCD1O75127 700 aaKnown RBP17.26■□□□□ 0.35
CHPT1-207ENST00000552213 SIK1P57059 783 aa17.26■□□□□ 0.35
CHPT1-207ENST00000552213 SLC39A6Q13433 755 aa17.26■□□□□ 0.35
CHPT1-207ENST00000552213 TTC5Q8N0Z6 440 aa17.26■□□□□ 0.35
CHPT1-207ENST00000552213 THUMPD2Q9BTF0 503 aaKnown RBP17.26■□□□□ 0.35
CHPT1-207ENST00000552213 LRRC4BQ9NT99 713 aa17.26■□□□□ 0.35
CHPT1-207ENST00000552213 MRC1P22897 1456 aa17.25■□□□□ 0.35
CHPT1-207ENST00000552213 BTBD11A6QL63 1104 aa17.25■□□□□ 0.35
CHPT1-207ENST00000552213 HMGB2P26583 209 aaKnown RBP17.25■□□□□ 0.35
CHPT1-207ENST00000552213 ITGB4P16144 1822 aa17.25■□□□□ 0.35
CHPT1-207ENST00000552213 ATP6V1AP38606 617 aa17.24■□□□□ 0.35
CHPT1-207ENST00000552213 STK32BQ9NY57 414 aa17.24■□□□□ 0.35
CHPT1-207ENST00000552213 SCN11AQ9UI33 1791 aa17.24■□□□□ 0.35
CHPT1-207ENST00000552213 RGPD3A6NKT7 1758 aaPredicted RBP17.23■□□□□ 0.35
CHPT1-207ENST00000552213 RGPD4Q7Z3J3 1758 aa17.23■□□□□ 0.35
CHPT1-207ENST00000552213 SENP3-EIF4A1A0A087X0R7 540 aa17.23■□□□□ 0.35
CHPT1-207ENST00000552213 TAF7Q15545 349 aaPredicted RBP17.23■□□□□ 0.35
CHPT1-207ENST00000552213 ADAMTS7Q9UKP4 1686 aa17.23■□□□□ 0.35
CHPT1-207ENST00000552213 R3HDM1Q15032 1099 aaKnown RBP17.22■□□□□ 0.35
CHPT1-207ENST00000552213 ZNF790Q6PG37 636 aa17.22■□□□□ 0.35
CHPT1-207ENST00000552213 PSDA5PKW4 1024 aaPredicted RBP17.21■□□□□ 0.35
CHPT1-207ENST00000552213 ANO8Q9HCE9 1232 aaPredicted RBP17.21■□□□□ 0.35
CHPT1-207ENST00000552213 TRIM35Q9UPQ4 493 aa17.21■□□□□ 0.35
CHPT1-207ENST00000552213 MIS18AQ9NYP9 233 aa17.2■□□□□ 0.34
CHPT1-207ENST00000552213 RREB1Q92766 1687 aa17.2■□□□□ 0.34
CHPT1-207ENST00000552213 ITPK1Q13572 414 aa17.19■□□□□ 0.34
CHPT1-207ENST00000552213 SLC15A2Q16348 729 aa17.19■□□□□ 0.34
CHPT1-207ENST00000552213 SLC4A9Q96Q91 983 aa17.19■□□□□ 0.34
CHPT1-207ENST00000552213 LAS1LQ9Y4W2 734 aaKnown RBP17.19■□□□□ 0.34
CHPT1-207ENST00000552213 KCNQ3O43525 872 aa17.18■□□□□ 0.34
CHPT1-207ENST00000552213 CALD1Q05682 793 aaKnown RBP17.18■□□□□ 0.34
CHPT1-207ENST00000552213 ZNF827Q17R98 1081 aa17.18■□□□□ 0.34
CHPT1-207ENST00000552213 ZNF496Q96IT1 587 aaPredicted RBP17.18■□□□□ 0.34
CHPT1-207ENST00000552213 AK7Q96M32 723 aa17.18■□□□□ 0.34
CHPT1-207ENST00000552213 FMNL2Q96PY5 1086 aa17.18■□□□□ 0.34
CHPT1-207ENST00000552213 TFCP2L1Q9NZI6 479 aa17.18■□□□□ 0.34
CHPT1-207ENST00000552213 SALL2Q9Y467 1007 aaPredicted RBP17.18■□□□□ 0.34
CHPT1-207ENST00000552213 NUP188Q5SRE5 1749 aa17.18■□□□□ 0.34
CHPT1-207ENST00000552213 LY75O60449 1722 aa17.17■□□□□ 0.34
CHPT1-207ENST00000552213 LINC00116Q8NCU8 138 aa17.17■□□□□ 0.34
CHPT1-207ENST00000552213 AKT1S1Q96B36 256 aa17.17■□□□□ 0.34
CHPT1-207ENST00000552213 TSPYL4Q9UJ04 414 aa17.17■□□□□ 0.34
CHPT1-207ENST00000552213 DNAJC10Q8IXB1 793 aa17.16■□□□□ 0.34
CHPT1-207ENST00000552213 VSIG10Q8N0Z9 540 aa17.16■□□□□ 0.34
CHPT1-207ENST00000552213 DLG5Q8TDM6 1919 aa17.15■□□□□ 0.34
CHPT1-207ENST00000552213 HEG1Q9ULI3 1381 aa17.15■□□□□ 0.34
CHPT1-207ENST00000552213 CCDC27Q2M243 656 aa17.14■□□□□ 0.33
CHPT1-207ENST00000552213 BABAM1Q9NWV8 329 aa17.14■□□□□ 0.33
CHPT1-207ENST00000552213 KCPQ6ZWJ8 1503 aa17.14■□□□□ 0.33
CHPT1-207ENST00000552213 VIRMAQ69YN4 1812 aaKnown RBP17.13■□□□□ 0.33
CHPT1-207ENST00000552213 GNPATO15228 680 aa17.13■□□□□ 0.33
CHPT1-207ENST00000552213 MSH5O43196 834 aa17.13■□□□□ 0.33
CHPT1-207ENST00000552213 STARD3NLO95772 234 aa17.13■□□□□ 0.33
CHPT1-207ENST00000552213 NCBP3Q53F19 620 aaKnown RBP17.13■□□□□ 0.33
CHPT1-207ENST00000552213 WWC1Q8IX03 1113 aa17.13■□□□□ 0.33
CHPT1-207ENST00000552213 TEX13AQ9BXU3 409 aaPredicted RBP17.13■□□□□ 0.33
CHPT1-207ENST00000552213 PAPPAQ13219 1627 aa17.12■□□□□ 0.33
CHPT1-207ENST00000552213 PHF14O94880 888 aa17.12■□□□□ 0.33
CHPT1-207ENST00000552213 SNRPA1P09661 255 aaKnown RBP17.12■□□□□ 0.33
CHPT1-207ENST00000552213 CRKLP46109 303 aaKnown RBP17.12■□□□□ 0.33
CHPT1-207ENST00000552213 NGEFQ8N5V2 710 aa17.12■□□□□ 0.33
CHPT1-207ENST00000552213 SIPA1L3O60292 1781 aaPredicted RBP17.11■□□□□ 0.33
CHPT1-207ENST00000552213 CHL1O00533 1208 aa17.11■□□□□ 0.33
CHPT1-207ENST00000552213 CYP19A1P11511 503 aaPredicted RBP17.11■□□□□ 0.33
CHPT1-207ENST00000552213 EIF4A1P60842 406 aaKnown RBP17.11■□□□□ 0.33
CHPT1-207ENST00000552213 GNAI1P63096 354 aa17.11■□□□□ 0.33
CHPT1-207ENST00000552213 RC3H1Q5TC82 1133 aaKnown RBP17.11■□□□□ 0.33
CHPT1-207ENST00000552213 CFAP44Q96MT7 982 aa17.11■□□□□ 0.33
CHPT1-207ENST00000552213 IFT57Q9NWB7 429 aa17.11■□□□□ 0.33
CHPT1-207ENST00000552213 RTCBQ9Y3I0 505 aaKnown RBP17.11■□□□□ 0.33
CHPT1-207ENST00000552213 CNTNAP4Q9C0A0 1308 aa17.11■□□□□ 0.33
CHPT1-207ENST00000552213 FLAD1Q8NFF5 587 aa17.1■□□□□ 0.33
CHPT1-207ENST00000552213 CCDC87Q9NVE4 849 aa17.1■□□□□ 0.33
CHPT1-207ENST00000552213 C5P01031 1676 aa17.1■□□□□ 0.33
CHPT1-207ENST00000552213 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.09■□□□□ 0.33
CHPT1-207ENST00000552213 PDGFDQ9GZP0 370 aaPredicted RBP17.09■□□□□ 0.33
CHPT1-207ENST00000552213 PNPLA7Q6ZV29 1317 aa17.09■□□□□ 0.33
CHPT1-207ENST00000552213 C4BP0C0L5 1744 aa17.09■□□□□ 0.33
CHPT1-207ENST00000552213 PRAMEF22A3QJZ6 481 aa17.08■□□□□ 0.32
CHPT1-207ENST00000552213 RPS6KA4O75676 772 aa17.08■□□□□ 0.32
CHPT1-207ENST00000552213 SSFA2P28290 1259 aa17.08■□□□□ 0.32
CHPT1-207ENST00000552213 INTS5Q6P9B9 1019 aaKnown RBP17.08■□□□□ 0.32
CHPT1-207ENST00000552213 SMIM5Q71RC9 77 aa17.08■□□□□ 0.32
CHPT1-207ENST00000552213 MBIPQ9NS73 344 aa17.08■□□□□ 0.32
CHPT1-207ENST00000552213 USP16Q9Y5T5 823 aa17.08■□□□□ 0.32
CHPT1-207ENST00000552213 ZNF831Q5JPB2 1677 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms