RNA–Protein interactions for RNA: ENST00000551706.1

CDK4-208, Transcript of cyclin dependent kinase 4, humanhuman

TSL 1 (best)

Gene CDK4, Length 984 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-208ENST00000551706 SYTL4Q96C24 671 aaPredicted RBP23.16■■□□□ 1.3
CDK4-208ENST00000551706 TFCP2L1Q9NZI6 479 aa23.16■■□□□ 1.3
CDK4-208ENST00000551706 ZNF530Q6P9A1 599 aaPredicted RBP23.15■■□□□ 1.3
CDK4-208ENST00000551706 C1orf141Q5JVX7 400 aa23.14■■□□□ 1.29
CDK4-208ENST00000551706 U2AF1L5P0DN76 240 aaPredicted RBP23.13■■□□□ 1.29
CDK4-208ENST00000551706 U2AF1Q01081 240 aaKnown RBP eCLIP23.13■■□□□ 1.29
CDK4-208ENST00000551706 TUBGCP6Q96RT7 1819 aa23.12■■□□□ 1.29
CDK4-208ENST00000551706 FCHSD2O94868 740 aa23.11■■□□□ 1.29
CDK4-208ENST00000551706 DCAF5Q96JK2 942 aa23.11■■□□□ 1.29
CDK4-208ENST00000551706 DOT1LQ8TEK3 1739 aa23.11■■□□□ 1.29
CDK4-208ENST00000551706 RSPH6AQ9H0K4 717 aa23.1■■□□□ 1.29
CDK4-208ENST00000551706 AKAP4Q5JQC9 854 aa23.09■■□□□ 1.29
CDK4-208ENST00000551706 PRKAR2BP31323 418 aa23.08■■□□□ 1.29
CDK4-208ENST00000551706 KCNQ4P56696 695 aa23.08■■□□□ 1.29
CDK4-208ENST00000551706 ERVV-2B6SEH9 535 aa23.07■■□□□ 1.28
CDK4-208ENST00000551706 MTHFSDQ2M296 383 aaKnown RBP23.07■■□□□ 1.28
CDK4-208ENST00000551706 MPRIPQ6WCQ1 1025 aa23.07■■□□□ 1.28
CDK4-208ENST00000551706 GAS2L2Q8NHY3 880 aa23.07■■□□□ 1.28
CDK4-208ENST00000551706 ZNF526Q8TF50 670 aaPredicted RBP23.07■■□□□ 1.28
CDK4-208ENST00000551706 ADCY9O60503 1353 aa23.06■■□□□ 1.28
CDK4-208ENST00000551706 PNNQ9H307 717 aaKnown RBP23.06■■□□□ 1.28
CDK4-208ENST00000551706 TMOD3Q9NYL9 352 aa23.06■■□□□ 1.28
CDK4-208ENST00000551706 MSH5O43196 834 aa23.05■■□□□ 1.28
CDK4-208ENST00000551706 ANP32CO43423 234 aa23.05■■□□□ 1.28
CDK4-208ENST00000551706 NEFMP07197 916 aa23.04■■□□□ 1.28
CDK4-208ENST00000551706 TOGARAM1Q9Y4F4 1720 aa23.03■■□□□ 1.28
CDK4-208ENST00000551706 KDM6AO15550 1401 aaPredicted RBP23.03■■□□□ 1.28
CDK4-208ENST00000551706 PIGBQ92521 554 aa23.03■■□□□ 1.28
CDK4-208ENST00000551706 SMARCC1Q92922 1105 aaPredicted RBP23.03■■□□□ 1.28
CDK4-208ENST00000551706 CABP4P57796 275 aa23.02■■□□□ 1.28
CDK4-208ENST00000551706 COL23A1Q86Y22 540 aaPredicted RBP23.01■■□□□ 1.27
CDK4-208ENST00000551706 PHACTR3Q96KR7 559 aa23.01■■□□□ 1.27
CDK4-208ENST00000551706 CD2APQ9Y5K6 639 aa23.01■■□□□ 1.27
CDK4-208ENST00000551706 LY75O60449 1722 aa23.01■■□□□ 1.27
CDK4-208ENST00000551706 HMGB2P26583 209 aaKnown RBP23■■□□□ 1.27
CDK4-208ENST00000551706 GNAT3A8MTJ3 354 aa22.99■■□□□ 1.27
CDK4-208ENST00000551706 WDR43Q15061 677 aaKnown RBP eCLIP22.99■■□□□ 1.27
CDK4-208ENST00000551706 MSL1Q68DK7 614 aa22.99■■□□□ 1.27
CDK4-208ENST00000551706 CCNL1Q9UK58 526 aaPredicted RBP22.99■■□□□ 1.27
CDK4-208ENST00000551706 PALLDQ8WX93 1383 aa22.99■■□□□ 1.27
CDK4-208ENST00000551706 ITGB4P16144 1822 aa22.97■■□□□ 1.27
CDK4-208ENST00000551706 RNMTO43148 476 aaKnown RBP22.97■■□□□ 1.27
CDK4-208ENST00000551706 APLP1P51693 650 aa22.96■■□□□ 1.27
CDK4-208ENST00000551706 PLEKHF1Q96S99 279 aa22.96■■□□□ 1.27
CDK4-208ENST00000551706 MAPK8IP3Q9UPT6 1336 aa22.96■■□□□ 1.27
CDK4-208ENST00000551706 KIF3CO14782 793 aa22.95■■□□□ 1.26
CDK4-208ENST00000551706 NFATC2IPQ8NCF5 419 aa22.95■■□□□ 1.26
CDK4-208ENST00000551706 SLC52A2Q9HAB3 445 aa22.95■■□□□ 1.26
CDK4-208ENST00000551706 LGR6Q9HBX8 967 aa22.95■■□□□ 1.26
CDK4-208ENST00000551706 ATG3Q9NT62 314 aa22.94■■□□□ 1.26
CDK4-208ENST00000551706 ASAP1Q9ULH1 1129 aa22.94■■□□□ 1.26
CDK4-208ENST00000551706 RTF1Q92541 710 aaKnown RBP22.93■■□□□ 1.26
CDK4-208ENST00000551706 MRC1P22897 1456 aa22.92■■□□□ 1.26
CDK4-208ENST00000551706 SCN11AQ9UI33 1791 aa22.92■■□□□ 1.26
CDK4-208ENST00000551706 HTATSF1O43719 755 aaKnown RBP22.92■■□□□ 1.26
CDK4-208ENST00000551706 ADAMTS7Q9UKP4 1686 aa22.92■■□□□ 1.26
CDK4-208ENST00000551706 IL17REQ8NFR9 667 aa22.91■■□□□ 1.26
CDK4-208ENST00000551706 LOC102724428A0A0B4J2F2 783 aa22.9■■□□□ 1.26
CDK4-208ENST00000551706 SIK1P57059 783 aa22.9■■□□□ 1.26
CDK4-208ENST00000551706 TEFQ10587 303 aa22.9■■□□□ 1.26
CDK4-208ENST00000551706 NFE2L2Q16236 605 aa22.9■■□□□ 1.26
CDK4-208ENST00000551706 DNAJC5GQ8N7S2 189 aa22.9■■□□□ 1.26
CDK4-208ENST00000551706 CEMIPQ8WUJ3 1361 aa22.89■■□□□ 1.26
CDK4-208ENST00000551706 FLAD1Q8NFF5 587 aa22.89■■□□□ 1.25
CDK4-208ENST00000551706 ADAMTS8Q9UP79 889 aa22.89■■□□□ 1.25
CDK4-208ENST00000551706 RUNDC1Q96C34 613 aa22.87■■□□□ 1.25
CDK4-208ENST00000551706 MRS2Q9HD23 443 aa22.86■■□□□ 1.25
CDK4-208ENST00000551706 WWC3Q9ULE0 1092 aa22.86■■□□□ 1.25
CDK4-208ENST00000551706 C5P01031 1676 aa22.86■■□□□ 1.25
CDK4-208ENST00000551706 ATP6V1AP38606 617 aa22.85■■□□□ 1.25
CDK4-208ENST00000551706 RBM42Q9BTD8 480 aaKnown RBP22.85■■□□□ 1.25
CDK4-208ENST00000551706 TOMM70O94826 608 aa22.84■■□□□ 1.25
CDK4-208ENST00000551706 CCDC184Q52MB2 194 aa22.84■■□□□ 1.25
CDK4-208ENST00000551706 MCM10Q7L590 875 aa22.83■■□□□ 1.25
CDK4-208ENST00000551706 CCDC146Q8IYE0 955 aa22.83■■□□□ 1.25
CDK4-208ENST00000551706 PTCD1O75127 700 aaKnown RBP22.82■■□□□ 1.24
CDK4-208ENST00000551706 TMPOP42166 694 aaKnown RBP22.82■■□□□ 1.24
CDK4-208ENST00000551706 LMOD3Q0VAK6 560 aa22.82■■□□□ 1.24
CDK4-208ENST00000551706 TTC5Q8N0Z6 440 aa22.82■■□□□ 1.24
CDK4-208ENST00000551706 RIPK4P57078 832 aa22.81■■□□□ 1.24
CDK4-208ENST00000551706 PNISRQ8TF01 805 aaKnown RBP22.81■■□□□ 1.24
CDK4-208ENST00000551706 BTBD11A6QL63 1104 aa22.8■■□□□ 1.24
CDK4-208ENST00000551706 SLC39A6Q13433 755 aa22.8■■□□□ 1.24
CDK4-208ENST00000551706 ITPK1Q13572 414 aa22.8■■□□□ 1.24
CDK4-208ENST00000551706 DCTN1Q14203 1278 aa22.8■■□□□ 1.24
CDK4-208ENST00000551706 COL13A1Q5TAT6 717 aaPredicted RBP22.8■■□□□ 1.24
CDK4-208ENST00000551706 SLC4A9Q96Q91 983 aa22.8■■□□□ 1.24
CDK4-208ENST00000551706 ZNF831Q5JPB2 1677 aa22.8■■□□□ 1.24
CDK4-208ENST00000551706 VIRMAQ69YN4 1812 aaKnown RBP22.8■■□□□ 1.24
CDK4-208ENST00000551706 ZNF790Q6PG37 636 aa22.79■■□□□ 1.24
CDK4-208ENST00000551706 LINC00116Q8NCU8 138 aa22.79■■□□□ 1.24
CDK4-208ENST00000551706 AK7Q96M32 723 aa22.79■■□□□ 1.24
CDK4-208ENST00000551706 TAF1LQ8IZX4 1826 aa22.79■■□□□ 1.24
CDK4-208ENST00000551706 CAPN15O75808 1086 aa22.78■■□□□ 1.24
CDK4-208ENST00000551706 TAF7Q15545 349 aaPredicted RBP22.78■■□□□ 1.24
CDK4-208ENST00000551706 CICQ96RK0 1608 aaPredicted RBP22.78■■□□□ 1.24
CDK4-208ENST00000551706 VSIG10Q8N0Z9 540 aa22.77■■□□□ 1.24
CDK4-208ENST00000551706 WDR90Q96KV7 1748 aa22.77■■□□□ 1.23
CDK4-208ENST00000551706 C4BP0C0L5 1744 aa22.76■■□□□ 1.23
CDK4-208ENST00000551706 SIPA1L3O60292 1781 aaPredicted RBP22.76■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms