RNA–Protein interactions for RNA: ENST00000550987.5

CPSF6-206, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-206ENST00000550987 PTCD1O75127 700 aaKnown RBP8.55□□□□□ -1.04
CPSF6-206ENST00000550987 TRIM32Q13049 653 aa8.55□□□□□ -1.04
CPSF6-206ENST00000550987 EHBP1Q8NDI1 1231 aa8.55□□□□□ -1.04
CPSF6-206ENST00000550987 VTI1AQ96AJ9 217 aa8.55□□□□□ -1.04
CPSF6-206ENST00000550987 BCL2L13Q9BXK5 485 aa8.55□□□□□ -1.04
CPSF6-206ENST00000550987 IFT140Q96RY7 1462 aa8.55□□□□□ -1.04
CPSF6-206ENST00000550987 CADPSQ9ULU8 1353 aa8.54□□□□□ -1.04
CPSF6-206ENST00000550987 M0R2N6 131 aa8.54□□□□□ -1.04
CPSF6-206ENST00000550987 ICMTO60725 284 aa8.54□□□□□ -1.04
CPSF6-206ENST00000550987 WNT7BP56706 349 aa8.54□□□□□ -1.04
CPSF6-206ENST00000550987 INTS6LQ5JSJ4 861 aaKnown RBP8.54□□□□□ -1.04
CPSF6-206ENST00000550987 DNAJC14Q6Y2X3 702 aaPredicted RBP8.54□□□□□ -1.04
CPSF6-206ENST00000550987 SEPT3Q9UH03 358 aa8.54□□□□□ -1.04
CPSF6-206ENST00000550987 SETD1AO15047 1707 aaKnown RBP8.54□□□□□ -1.04
CPSF6-206ENST00000550987 PTPRMP28827 1452 aa8.53□□□□□ -1.04
CPSF6-206ENST00000550987 ANKRD33BA6NCL7 494 aa8.53□□□□□ -1.04
CPSF6-206ENST00000550987 CD2BP2O95400 341 aaKnown RBP8.53□□□□□ -1.04
CPSF6-206ENST00000550987 MAPK1P28482 360 aa8.53□□□□□ -1.04
CPSF6-206ENST00000550987 WEE1P30291 646 aa8.53□□□□□ -1.04
CPSF6-206ENST00000550987 SCTRP47872 440 aa8.53□□□□□ -1.04
CPSF6-206ENST00000550987 FKBP4Q02790 459 aaKnown RBP eCLIP8.53□□□□□ -1.04
CPSF6-206ENST00000550987 DHX9Q08211 1270 aaKnown RBP8.53□□□□□ -1.04
CPSF6-206ENST00000550987 CC2D2BQ6DHV5 1058 aa8.53□□□□□ -1.04
CPSF6-206ENST00000550987 ZNF358Q9NW07 568 aa8.53□□□□□ -1.04
CPSF6-206ENST00000550987 RNF223E7ERA6 249 aa8.52□□□□□ -1.05
CPSF6-206ENST00000550987 SF3B2Q13435 895 aaKnown RBP8.52□□□□□ -1.05
CPSF6-206ENST00000550987 NAA30Q147X3 362 aaPredicted RBP8.52□□□□□ -1.05
CPSF6-206ENST00000550987 ZNF326Q5BKZ1 582 aaKnown RBP8.52□□□□□ -1.05
CPSF6-206ENST00000550987 CHMP7Q8WUX9 453 aaPredicted RBP8.52□□□□□ -1.05
CPSF6-206ENST00000550987 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.52□□□□□ -1.053e-8■■■■■ 52.8
CPSF6-206ENST00000550987 MAP4K5Q9Y4K4 846 aa8.52□□□□□ -1.05
CPSF6-206ENST00000550987 BAZ1BQ9UIG0 1483 aaKnown RBP8.51□□□□□ -1.05
CPSF6-206ENST00000550987 C21orf2O43822 256 aa8.51□□□□□ -1.05
CPSF6-206ENST00000550987 HSPA2P54652 639 aa8.51□□□□□ -1.05
CPSF6-206ENST00000550987 FKBP5Q13451 457 aaPredicted RBP8.51□□□□□ -1.05
CPSF6-206ENST00000550987 ZSCAN29Q8IWY8 852 aaPredicted RBP8.51□□□□□ -1.05
CPSF6-206ENST00000550987 ANKLE1Q8NAG6 615 aa8.51□□□□□ -1.05
CPSF6-206ENST00000550987 GIPC2Q8TF65 315 aa8.51□□□□□ -1.05
CPSF6-206ENST00000550987 SCG3Q8WXD2 468 aaKnown RBP8.51□□□□□ -1.05
CPSF6-206ENST00000550987 CYLDQ9NQC7 956 aa8.51□□□□□ -1.05
CPSF6-206ENST00000550987 SERTAD1Q9UHV2 236 aa8.51□□□□□ -1.05
CPSF6-206ENST00000550987 IQSEC2Q5JU85 1478 aa8.51□□□□□ -1.05
CPSF6-206ENST00000550987 FANCD2Q9BXW9 1451 aa8.51□□□□□ -1.05
CPSF6-206ENST00000550987 UNCXA6NJT0 531 aa8.5□□□□□ -1.05
CPSF6-206ENST00000550987 GDF10P55107 478 aa8.5□□□□□ -1.05
CPSF6-206ENST00000550987 TNS4Q8IZW8 715 aa8.5□□□□□ -1.05
CPSF6-206ENST00000550987 GAS2L2Q8NHY3 880 aa8.5□□□□□ -1.05
CPSF6-206ENST00000550987 BCL11AQ9H165 835 aa8.5□□□□□ -1.05
CPSF6-206ENST00000550987 TMPRSS4Q9NRS4 437 aa8.5□□□□□ -1.05
CPSF6-206ENST00000550987 DNMT3AQ9Y6K1 912 aaPredicted RBP8.5□□□□□ -1.05
CPSF6-206ENST00000550987 ZNF16P17020 682 aaPredicted RBP8.49□□□□□ -1.05
CPSF6-206ENST00000550987 IGFBP4P22692 258 aa8.49□□□□□ -1.05
CPSF6-206ENST00000550987 FSHRP23945 695 aa8.49□□□□□ -1.05
CPSF6-206ENST00000550987 RPIAP49247 311 aa8.49□□□□□ -1.05
CPSF6-206ENST00000550987 ERVK-9P63128 1117 aa8.49□□□□□ -1.05
CPSF6-206ENST00000550987 SKOR1P84550 965 aa8.49□□□□□ -1.05
CPSF6-206ENST00000550987 MTMR3Q13615 1198 aa8.49□□□□□ -1.05
CPSF6-206ENST00000550987 RC3H1Q5TC82 1133 aaKnown RBP8.49□□□□□ -1.05
CPSF6-206ENST00000550987 CAPN12Q6ZSI9 719 aa8.49□□□□□ -1.05
CPSF6-206ENST00000550987 MRRFQ96E11 262 aaKnown RBP8.49□□□□□ -1.05
CPSF6-206ENST00000550987 MAPKBP1O60336 1514 aa8.49□□□□□ -1.05
CPSF6-206ENST00000550987 ATAD2Q6PL18 1390 aa8.48□□□□□ -1.05
CPSF6-206ENST00000550987 TMEM229AB2RXF0 380 aa8.48□□□□□ -1.05
CPSF6-206ENST00000550987 MYT1Q01538 1121 aa8.48□□□□□ -1.05
CPSF6-206ENST00000550987 AAMPQ13685 434 aa8.48□□□□□ -1.05
CPSF6-206ENST00000550987 PURBQ96QR8 312 aaKnown RBP8.48□□□□□ -1.05
CPSF6-206ENST00000550987 DCTN4Q9UJW0 460 aa8.48□□□□□ -1.05
CPSF6-206ENST00000550987 FOXO3O43524 673 aa8.47□□□□□ -1.05
CPSF6-206ENST00000550987 INHAP05111 366 aa8.47□□□□□ -1.05
CPSF6-206ENST00000550987 CDAN1Q8IWY9 1227 aa8.47□□□□□ -1.05
CPSF6-206ENST00000550987 COL26A1Q96A83 441 aa8.47□□□□□ -1.05
CPSF6-206ENST00000550987 OSBPL3Q9H4L5 887 aa8.47□□□□□ -1.05
CPSF6-206ENST00000550987 HCSTQ9UBK5 93 aa8.47□□□□□ -1.05
CPSF6-206ENST00000550987 FAM13AO94988 1023 aa8.46□□□□□ -1.06
CPSF6-206ENST00000550987 ESCO1Q5FWF5 840 aa8.46□□□□□ -1.06
CPSF6-206ENST00000550987 PLA2G2CQ5R387 149 aa8.46□□□□□ -1.06
CPSF6-206ENST00000550987 CYP2U1Q7Z449 544 aa8.46□□□□□ -1.06
CPSF6-206ENST00000550987 CDK15Q96Q40 435 aa8.46□□□□□ -1.06
CPSF6-206ENST00000550987 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.46□□□□□ -1.06
CPSF6-206ENST00000550987 PPRC1Q5VV67 1664 aaKnown RBP8.46□□□□□ -1.06
CPSF6-206ENST00000550987 PPP1R12BO60237 982 aaPredicted RBP8.45□□□□□ -1.06
CPSF6-206ENST00000550987 STAU1O95793 577 aaKnown RBP8.45□□□□□ -1.06
CPSF6-206ENST00000550987 NOM1Q5C9Z4 860 aaKnown RBP8.45□□□□□ -1.06
CPSF6-206ENST00000550987 PPP1R18Q6NYC8 613 aa8.45□□□□□ -1.06
CPSF6-206ENST00000550987 CCDC116Q8IYX3 515 aa8.45□□□□□ -1.06
CPSF6-206ENST00000550987 ZNF784Q8NCA9 323 aaPredicted RBP8.45□□□□□ -1.06
CPSF6-206ENST00000550987 HELQQ8TDG4 1101 aa8.45□□□□□ -1.06
CPSF6-206ENST00000550987 TMC1Q8TDI8 760 aa8.45□□□□□ -1.06
CPSF6-206ENST00000550987 CHMP3Q9Y3E7 222 aa8.45□□□□□ -1.06
CPSF6-206ENST00000550987 COL17A1Q9UMD9 1497 aaPredicted RBP8.45□□□□□ -1.06
CPSF6-206ENST00000550987 GNRH1P01148 92 aa8.44□□□□□ -1.06
CPSF6-206ENST00000550987 GRM5P41594 1212 aa8.44□□□□□ -1.06
CPSF6-206ENST00000550987 SCNN1DP51172 638 aa8.44□□□□□ -1.06
CPSF6-206ENST00000550987 PPP1R26Q5T8A7 1209 aaPredicted RBP8.44□□□□□ -1.06
CPSF6-206ENST00000550987 NPAS4Q8IUM7 802 aa8.44□□□□□ -1.06
CPSF6-206ENST00000550987 ASB16Q96NS5 453 aa8.44□□□□□ -1.06
CPSF6-206ENST00000550987 TSPAN10Q9H1Z9 355 aaPredicted RBP8.44□□□□□ -1.06
CPSF6-206ENST00000550987 ETNK1Q9HBU6 452 aa8.44□□□□□ -1.06
CPSF6-206ENST00000550987 PGPEP1Q9NXJ5 209 aa8.44□□□□□ -1.06
CPSF6-206ENST00000550987 ITGBL1O95965 494 aaPredicted RBP8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 111.4 ms