RNA–Protein interactions for RNA: ENST00000550929.5

LETMD1-228, Transcript of LETM1 domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LETMD1, Length 1,389 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-228ENST00000550929 COL23A1Q86Y22 540 aaPredicted RBP12.45□□□□□ -0.42
LETMD1-228ENST00000550929 SLC16A10Q8TF71 515 aa12.45□□□□□ -0.42
LETMD1-228ENST00000550929 SPG7Q9UQ90 795 aa12.45□□□□□ -0.42
LETMD1-228ENST00000550929 PIGBQ92521 554 aa12.44□□□□□ -0.42
LETMD1-228ENST00000550929 PALLDQ8WX93 1383 aa12.44□□□□□ -0.42
LETMD1-228ENST00000550929 GABBR2O75899 941 aa12.43□□□□□ -0.42
LETMD1-228ENST00000550929 GPR162Q16538 588 aa12.43□□□□□ -0.42
LETMD1-228ENST00000550929 CREBZFQ9NS37 354 aa12.43□□□□□ -0.42
LETMD1-228ENST00000550929 PHF14O94880 888 aa12.42□□□□□ -0.42
LETMD1-228ENST00000550929 NKX1-1Q15270 411 aaPredicted RBP12.42□□□□□ -0.42
LETMD1-228ENST00000550929 NLGN2Q8NFZ4 835 aa12.42□□□□□ -0.42
LETMD1-228ENST00000550929 LY75O60449 1722 aa12.41□□□□□ -0.42
LETMD1-228ENST00000550929 PHKG2P15735 406 aa12.41□□□□□ -0.42
LETMD1-228ENST00000550929 MORC1Q86VD1 984 aa12.41□□□□□ -0.42
LETMD1-228ENST00000550929 AMIGO3Q86WK7 504 aa12.41□□□□□ -0.42
LETMD1-228ENST00000550929 IFNL2Q8IZJ0 200 aa12.41□□□□□ -0.42
LETMD1-228ENST00000550929 SMARCC1Q92922 1105 aaPredicted RBP12.41□□□□□ -0.42
LETMD1-228ENST00000550929 AK7Q96M32 723 aa12.41□□□□□ -0.42
LETMD1-228ENST00000550929 TMOD3Q9NYL9 352 aa12.41□□□□□ -0.42
LETMD1-228ENST00000550929 ASAP1Q9ULH1 1129 aa12.41□□□□□ -0.42
LETMD1-228ENST00000550929 NCAPD2Q15021 1401 aa12.4□□□□□ -0.42
LETMD1-228ENST00000550929 CD44P16070 742 aaKnown RBP12.4□□□□□ -0.42
LETMD1-228ENST00000550929 MAP2P11137 1827 aaKnown RBP12.39□□□□□ -0.43
LETMD1-228ENST00000550929 TUBGCP6Q96RT7 1819 aa12.39□□□□□ -0.43
LETMD1-228ENST00000550929 LOC102724428A0A0B4J2F2 783 aa12.39□□□□□ -0.43
LETMD1-228ENST00000550929 SIK1P57059 783 aa12.39□□□□□ -0.43
LETMD1-228ENST00000550929 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.39□□□□□ -0.43
LETMD1-228ENST00000550929 TOGARAM1Q9Y4F4 1720 aa12.38□□□□□ -0.43
LETMD1-228ENST00000550929 MAP3K5Q99683 1374 aa12.38□□□□□ -0.43
LETMD1-228ENST00000550929 CNGB1Q14028 1251 aaPredicted RBP12.38□□□□□ -0.43
LETMD1-228ENST00000550929 ZNF784Q8NCA9 323 aaPredicted RBP12.38□□□□□ -0.43
LETMD1-228ENST00000550929 LINC00116Q8NCU8 138 aa12.38□□□□□ -0.43
LETMD1-228ENST00000550929 KNSTRNQ9Y448 316 aa12.38□□□□□ -0.43
LETMD1-228ENST00000550929 ITPK1Q13572 414 aa12.37□□□□□ -0.43
LETMD1-228ENST00000550929 AEBP1Q8IUX7 1158 aa12.37□□□□□ -0.43
LETMD1-228ENST00000550929 ATG3Q9NT62 314 aa12.37□□□□□ -0.43
LETMD1-228ENST00000550929 IGSF1Q8N6C5 1336 aa12.37□□□□□ -0.43
LETMD1-228ENST00000550929 PKD1L3Q7Z443 1732 aa12.36□□□□□ -0.43
LETMD1-228ENST00000550929 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.36□□□□□ -0.43
LETMD1-228ENST00000550929 ATP6V1AP38606 617 aa12.36□□□□□ -0.43
LETMD1-228ENST00000550929 PLEKHO1Q53GL0 409 aaPredicted RBP12.36□□□□□ -0.43
LETMD1-228ENST00000550929 ZNF530Q6P9A1 599 aaPredicted RBP12.36□□□□□ -0.43
LETMD1-228ENST00000550929 FLAD1Q8NFF5 587 aa12.36□□□□□ -0.43
LETMD1-228ENST00000550929 QSER1Q2KHR3 1735 aa12.36□□□□□ -0.43
LETMD1-228ENST00000550929 ANKRD26Q9UPS8 1709 aa12.36□□□□□ -0.43
LETMD1-228ENST00000550929 GNPATO15228 680 aa12.35□□□□□ -0.43
LETMD1-228ENST00000550929 SULT6B1Q6IMI4 303 aa12.35□□□□□ -0.43
LETMD1-228ENST00000550929 WWC3Q9ULE0 1092 aa12.35□□□□□ -0.43
LETMD1-228ENST00000550929 ITGB4P16144 1822 aa12.35□□□□□ -0.43
LETMD1-228ENST00000550929 C5P01031 1676 aa12.35□□□□□ -0.43
LETMD1-228ENST00000550929 YBX3P16989 372 aaKnown RBP eCLIP12.34□□□□□ -0.435e-13■■□□□ 14.4
LETMD1-228ENST00000550929 KIF7Q2M1P5 1343 aa12.34□□□□□ -0.43
LETMD1-228ENST00000550929 CABP4P57796 275 aa12.33□□□□□ -0.44
LETMD1-228ENST00000550929 SLC4A9Q96Q91 983 aa12.33□□□□□ -0.44
LETMD1-228ENST00000550929 C4BP0C0L5 1744 aa12.33□□□□□ -0.44
LETMD1-228ENST00000550929 ERVV-2B6SEH9 535 aa12.32□□□□□ -0.44
LETMD1-228ENST00000550929 HMGB2P26583 209 aaKnown RBP12.32□□□□□ -0.44
LETMD1-228ENST00000550929 IL13P35225 146 aa12.32□□□□□ -0.44
LETMD1-228ENST00000550929 MTHFSP49914 203 aa12.32□□□□□ -0.44
LETMD1-228ENST00000550929 AMER1Q5JTC6 1135 aaPredicted RBP12.32□□□□□ -0.44
LETMD1-228ENST00000550929 CC2D1BQ5T0F9 858 aaKnown RBP12.32□□□□□ -0.44
LETMD1-228ENST00000550929 DCAF5Q96JK2 942 aa12.32□□□□□ -0.44
LETMD1-228ENST00000550929 UTRNP46939 3433 aa12.32□□□□□ -0.44
LETMD1-228ENST00000550929 COL24A1Q17RW2 1714 aa12.32□□□□□ -0.44
LETMD1-228ENST00000550929 HSP90AB1P08238 724 aaKnown RBP12.31□□□□□ -0.44
LETMD1-228ENST00000550929 SSFA2P28290 1259 aa12.31□□□□□ -0.44
LETMD1-228ENST00000550929 AMOTQ4VCS5 1084 aa12.31□□□□□ -0.44
LETMD1-228ENST00000550929 C1orf141Q5JVX7 400 aa12.31□□□□□ -0.44
LETMD1-228ENST00000550929 PTCD1O75127 700 aaKnown RBP12.3□□□□□ -0.44
LETMD1-228ENST00000550929 HMOX1P09601 288 aa12.3□□□□□ -0.44
LETMD1-228ENST00000550929 CD2APQ9Y5K6 639 aa12.3□□□□□ -0.44
LETMD1-228ENST00000550929 KDM6AO15550 1401 aaPredicted RBP12.3□□□□□ -0.44
LETMD1-228ENST00000550929 TAF1LQ8IZX4 1826 aa12.3□□□□□ -0.44
LETMD1-228ENST00000550929 NFATC2IPQ8NCF5 419 aa12.3□□□□□ -0.44
LETMD1-228ENST00000550929 GRIN3BO60391 1043 aa12.29□□□□□ -0.44
LETMD1-228ENST00000550929 TRAPPC3LQ5T215 181 aa12.29□□□□□ -0.44
LETMD1-228ENST00000550929 RTCBQ9Y3I0 505 aaKnown RBP12.29□□□□□ -0.44
LETMD1-228ENST00000550929 KDRP35968 1356 aa12.28□□□□□ -0.44
LETMD1-228ENST00000550929 PER1O15534 1290 aaPredicted RBP12.28□□□□□ -0.44
LETMD1-228ENST00000550929 MMP10P09238 476 aa12.28□□□□□ -0.44
LETMD1-228ENST00000550929 ARHGEF1Q92888 912 aaKnown RBP12.28□□□□□ -0.44
LETMD1-228ENST00000550929 LGR6Q9HBX8 967 aa12.28□□□□□ -0.44
LETMD1-228ENST00000550929 CLCN6P51797 869 aa12.27□□□□□ -0.45
LETMD1-228ENST00000550929 UBR3Q6ZT12 1888 aa12.26□□□□□ -0.45
LETMD1-228ENST00000550929 RPS6KA4O75676 772 aa12.26□□□□□ -0.45
LETMD1-228ENST00000550929 RFC4P35249 363 aa12.26□□□□□ -0.45
LETMD1-228ENST00000550929 AKAP4Q5JQC9 854 aa12.26□□□□□ -0.45
LETMD1-228ENST00000550929 RC3H1Q5TC82 1133 aaKnown RBP12.26□□□□□ -0.45
LETMD1-228ENST00000550929 ZNF579Q8NAF0 562 aaKnown RBP12.26□□□□□ -0.45
LETMD1-228ENST00000550929 DIAPH1O60610 1272 aaKnown RBP12.25□□□□□ -0.45
LETMD1-228ENST00000550929 CRKLP46109 303 aaKnown RBP12.25□□□□□ -0.45
LETMD1-228ENST00000550929 MNX1P50219 401 aaPredicted RBP12.25□□□□□ -0.45
LETMD1-228ENST00000550929 SLC39A6Q13433 755 aa12.25□□□□□ -0.45
LETMD1-228ENST00000550929 MTHFSDQ2M296 383 aaKnown RBP12.25□□□□□ -0.45
LETMD1-228ENST00000550929 SRP68Q9UHB9 627 aaKnown RBP12.25□□□□□ -0.45
LETMD1-228ENST00000550929 PLEKHG2Q9H7P9 1386 aa12.24□□□□□ -0.45
LETMD1-228ENST00000550929 CNTNAP4Q9C0A0 1308 aa12.24□□□□□ -0.45
LETMD1-228ENST00000550929 GOLGB1Q14789 3259 aaKnown RBP12.24□□□□□ -0.45
LETMD1-228ENST00000550929 CHD4Q14839 1912 aa12.24□□□□□ -0.45
LETMD1-228ENST00000550929 U2SURPO15042 1029 aaKnown RBP12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms