RNA–Protein interactions for RNA: ENST00000550070.6

ERBB3-214, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 1 (best)

Gene ERBB3, Length 2,729 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-214ENST00000550070 ST18O60284 1047 aa12.61□□□□□ -0.39
ERBB3-214ENST00000550070 SLC4A2P04920 1241 aa12.61□□□□□ -0.39
ERBB3-214ENST00000550070 MIS18AQ9NYP9 233 aa12.61□□□□□ -0.39
ERBB3-214ENST00000550070 KCNG1Q9UIX4 513 aa12.61□□□□□ -0.39
ERBB3-214ENST00000550070 PRPF40AO75400 957 aaKnown RBP12.6□□□□□ -0.39
ERBB3-214ENST00000550070 REC8O95072 547 aa12.6□□□□□ -0.39
ERBB3-214ENST00000550070 G2E3Q7L622 706 aa12.6□□□□□ -0.39
ERBB3-214ENST00000550070 CHAMP1Q96JM3 812 aa12.6□□□□□ -0.39
ERBB3-214ENST00000550070 CRB1P82279 1406 aa12.6□□□□□ -0.39
ERBB3-214ENST00000550070 ERC2O15083 957 aa12.6□□□□□ -0.39
ERBB3-214ENST00000550070 HSP90AB2PQ58FF8 381 aa12.6□□□□□ -0.39
ERBB3-214ENST00000550070 GPT2Q8TD30 523 aa12.6□□□□□ -0.39
ERBB3-214ENST00000550070 ANP32BQ92688 251 aaKnown RBP12.6□□□□□ -0.39
ERBB3-214ENST00000550070 PSMD1Q99460 953 aa12.6□□□□□ -0.39
ERBB3-214ENST00000550070 F6X3S4 739 aa12.59□□□□□ -0.39
ERBB3-214ENST00000550070 GTF2E1P29083 439 aaPredicted RBP12.59□□□□□ -0.39
ERBB3-214ENST00000550070 ZSCAN30Q86W11 494 aa12.59□□□□□ -0.39
ERBB3-214ENST00000550070 RBSNQ9H1K0 784 aa12.59□□□□□ -0.39
ERBB3-214ENST00000550070 RBM27Q9P2N5 1060 aaKnown RBP12.59□□□□□ -0.39
ERBB3-214ENST00000550070 PDE1AP54750 535 aa12.59□□□□□ -0.39
ERBB3-214ENST00000550070 OSBPL3Q9H4L5 887 aa12.59□□□□□ -0.39
ERBB3-214ENST00000550070 TTC21BQ7Z4L5 1316 aa12.58□□□□□ -0.39
ERBB3-214ENST00000550070 PRIM1P49642 420 aaKnown RBP12.58□□□□□ -0.4
ERBB3-214ENST00000550070 SLC4A10Q6U841 1118 aa12.58□□□□□ -0.4
ERBB3-214ENST00000550070 PEAK1Q9H792 1746 aa12.58□□□□□ -0.4
ERBB3-214ENST00000550070 HSP90AA2PQ14568 343 aaPredicted RBP12.58□□□□□ -0.4
ERBB3-214ENST00000550070 SIRT1Q96EB6 747 aa12.58□□□□□ -0.4
ERBB3-214ENST00000550070 AGLP35573 1532 aa12.57□□□□□ -0.4
ERBB3-214ENST00000550070 FOXO3O43524 673 aa12.57□□□□□ -0.4
ERBB3-214ENST00000550070 HMMRO75330 724 aa12.57□□□□□ -0.4
ERBB3-214ENST00000550070 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.57□□□□□ -0.4
ERBB3-214ENST00000550070 TECPR2O15040 1411 aa12.57□□□□□ -0.4
ERBB3-214ENST00000550070 RGPD1P0DJD0 1748 aa12.57□□□□□ -0.4
ERBB3-214ENST00000550070 TSHZ3Q63HK5 1081 aa12.57□□□□□ -0.4
ERBB3-214ENST00000550070 OVOS2A0A0J9YW53 1432 aa12.56□□□□□ -0.4
ERBB3-214ENST00000550070 OVOS2Q6IE36 1432 aa12.56□□□□□ -0.4
ERBB3-214ENST00000550070 RRP9O43818 475 aaKnown RBP12.56□□□□□ -0.4
ERBB3-214ENST00000550070 NSFL1CQ9UNZ2 370 aaKnown RBP12.56□□□□□ -0.4
ERBB3-214ENST00000550070 EXOC6BQ9Y2D4 811 aa12.56□□□□□ -0.4
ERBB3-214ENST00000550070 NEK4P51957 841 aa12.56□□□□□ -0.4
ERBB3-214ENST00000550070 FOXD4L5Q5VV16 416 aaPredicted RBP12.56□□□□□ -0.4
ERBB3-214ENST00000550070 FOXD4L4Q8WXT5 416 aaPredicted RBP12.56□□□□□ -0.4
ERBB3-214ENST00000550070 TMEM63CQ9P1W3 806 aa12.56□□□□□ -0.4
ERBB3-214ENST00000550070 ACEP12821 1306 aa12.56□□□□□ -0.4
ERBB3-214ENST00000550070 NUTM2FA1L443 756 aa12.55□□□□□ -0.4
ERBB3-214ENST00000550070 TMX3Q96JJ7 454 aa12.55□□□□□ -0.4
ERBB3-214ENST00000550070 SALL3Q9BXA9 1300 aa12.55□□□□□ -0.4
ERBB3-214ENST00000550070 SOX12O15370 315 aa12.55□□□□□ -0.4
ERBB3-214ENST00000550070 CCT4P50991 539 aaKnown RBP12.55□□□□□ -0.4
ERBB3-214ENST00000550070 MTHFSDQ2M296 383 aaKnown RBP12.55□□□□□ -0.4
ERBB3-214ENST00000550070 KIAA1211Q6ZU35 1233 aa12.55□□□□□ -0.4
ERBB3-214ENST00000550070 CERS3Q8IU89 383 aa12.55□□□□□ -0.4
ERBB3-214ENST00000550070 PDLIM2Q96JY6 352 aa12.55□□□□□ -0.4
ERBB3-214ENST00000550070 TSPYL4Q9UJ04 414 aa12.55□□□□□ -0.4
ERBB3-214ENST00000550070 RIMS1Q86UR5 1692 aaKnown RBP12.55□□□□□ -0.4
ERBB3-214ENST00000550070 TUBGCP6Q96RT7 1819 aa12.55□□□□□ -0.4
ERBB3-214ENST00000550070 MSNP26038 577 aaKnown RBP12.54□□□□□ -0.4
ERBB3-214ENST00000550070 MAP3K19Q56UN5 1328 aa12.54□□□□□ -0.4
ERBB3-214ENST00000550070 ROBO2Q9HCK4 1378 aa12.54□□□□□ -0.4
ERBB3-214ENST00000550070 ESYT1Q9BSJ8 1104 aa12.54□□□□□ -0.4
ERBB3-214ENST00000550070 OFD1O75665 1012 aa12.53□□□□□ -0.4
ERBB3-214ENST00000550070 GNAI2P04899 355 aa12.53□□□□□ -0.4
ERBB3-214ENST00000550070 TPM2P07951 284 aa12.53□□□□□ -0.4
ERBB3-214ENST00000550070 PLCD4Q9BRC7 762 aa12.53□□□□□ -0.4
ERBB3-214ENST00000550070 ESF1Q9H501 851 aaKnown RBP12.53□□□□□ -0.4
ERBB3-214ENST00000550070 PALD1Q9ULE6 856 aa12.53□□□□□ -0.4
ERBB3-214ENST00000550070 LRSAM1Q6UWE0 723 aa12.53□□□□□ -0.4
ERBB3-214ENST00000550070 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.53□□□□□ -0.4
ERBB3-214ENST00000550070 NALCNQ8IZF0 1738 aa12.53□□□□□ -0.4
ERBB3-214ENST00000550070 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.53□□□□□ -0.4
ERBB3-214ENST00000550070 PNMA6EA0A0J9YXQ4 647 aa12.53□□□□□ -0.4
ERBB3-214ENST00000550070 SYCE3A1L190 88 aa12.53□□□□□ -0.4
ERBB3-214ENST00000550070 HS1BP3Q53T59 392 aa12.53□□□□□ -0.4
ERBB3-214ENST00000550070 USP6P35125 1406 aa12.52□□□□□ -0.4
ERBB3-214ENST00000550070 RTF1Q92541 710 aaKnown RBP12.52□□□□□ -0.41
ERBB3-214ENST00000550070 LRRCC1Q9C099 1032 aa12.52□□□□□ -0.41
ERBB3-214ENST00000550070 USP31Q70CQ4 1352 aa12.52□□□□□ -0.41
ERBB3-214ENST00000550070 PLEKHG3A1L390 1219 aa12.52□□□□□ -0.41
ERBB3-214ENST00000550070 BRD1O95696 1058 aa12.52□□□□□ -0.41
ERBB3-214ENST00000550070 CUL4AQ13619 759 aa12.52□□□□□ -0.41
ERBB3-214ENST00000550070 NOL7Q9UMY1 257 aaKnown RBP12.52□□□□□ -0.41
ERBB3-214ENST00000550070 TOPAZ1Q8N9V7 1692 aa12.52□□□□□ -0.41
ERBB3-214ENST00000550070 MX1P20591 662 aa12.51□□□□□ -0.41
ERBB3-214ENST00000550070 CHMLP26374 656 aa12.51□□□□□ -0.41
ERBB3-214ENST00000550070 NOL8Q76FK4 1167 aaKnown RBP12.51□□□□□ -0.41
ERBB3-214ENST00000550070 ARHGEF10O15013 1369 aa12.51□□□□□ -0.41
ERBB3-214ENST00000550070 RILPL2Q969X0 211 aa12.51□□□□□ -0.41
ERBB3-214ENST00000550070 PRDM16Q9HAZ2 1276 aa12.51□□□□□ -0.41
ERBB3-214ENST00000550070 MCM2P49736 904 aa12.5□□□□□ -0.41
ERBB3-214ENST00000550070 ATP8B2P98198 1209 aa12.5□□□□□ -0.41
ERBB3-214ENST00000550070 FAM43BQ6ZT52 329 aaPredicted RBP12.5□□□□□ -0.41
ERBB3-214ENST00000550070 UNC5CLQ8IV45 518 aa12.5□□□□□ -0.41
ERBB3-214ENST00000550070 TRIM6-TRIM34B2RNG4 842 aa12.5□□□□□ -0.41
ERBB3-214ENST00000550070 HDGFP51858 240 aaKnown RBP12.5□□□□□ -0.41
ERBB3-214ENST00000550070 FLIIQ13045 1269 aa12.5□□□□□ -0.41
ERBB3-214ENST00000550070 GRIPAP1Q4V328 841 aa12.5□□□□□ -0.41
ERBB3-214ENST00000550070 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.5□□□□□ -0.41
ERBB3-214ENST00000550070 NECTIN2Q92692 538 aa12.5□□□□□ -0.41
ERBB3-214ENST00000550070 ANO2Q9NQ90 1003 aa12.5□□□□□ -0.41
ERBB3-214ENST00000550070 FMN2Q9NZ56 1722 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms