RNA–Protein interactions for RNA: ENST00000549750.5

CNOT2-220, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 5

Gene CNOT2, Length 1,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-220ENST00000549750 COL13A1Q5TAT6 717 aaPredicted RBP18.73■□□□□ 0.59
CNOT2-220ENST00000549750 UBR3Q6ZT12 1888 aa18.71■□□□□ 0.59
CNOT2-220ENST00000549750 ZNF831Q5JPB2 1677 aa18.71■□□□□ 0.59
CNOT2-220ENST00000549750 CAPN15O75808 1086 aa18.71■□□□□ 0.59
CNOT2-220ENST00000549750 MORC1Q86VD1 984 aa18.71■□□□□ 0.59
CNOT2-220ENST00000549750 AK7Q96M32 723 aa18.71■□□□□ 0.59
CNOT2-220ENST00000549750 KNSTRNQ9Y448 316 aa18.71■□□□□ 0.59
CNOT2-220ENST00000549750 KIF7Q2M1P5 1343 aa18.71■□□□□ 0.59
CNOT2-220ENST00000549750 AMER1Q5JTC6 1135 aaPredicted RBP18.7■□□□□ 0.58
CNOT2-220ENST00000549750 TMOD3Q9NYL9 352 aa18.7■□□□□ 0.58
CNOT2-220ENST00000549750 KDRP35968 1356 aa18.69■□□□□ 0.58
CNOT2-220ENST00000549750 KLRG1Q96E93 195 aa18.69■□□□□ 0.58
CNOT2-220ENST00000549750 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.68■□□□□ 0.58
CNOT2-220ENST00000549750 LOC102724428A0A0B4J2F2 783 aa18.68■□□□□ 0.58
CNOT2-220ENST00000549750 PHF14O94880 888 aa18.68■□□□□ 0.58
CNOT2-220ENST00000549750 HSP90AB1P08238 724 aaKnown RBP18.68■□□□□ 0.58
CNOT2-220ENST00000549750 SIK1P57059 783 aa18.68■□□□□ 0.58
CNOT2-220ENST00000549750 AMIGO3Q86WK7 504 aa18.68■□□□□ 0.58
CNOT2-220ENST00000549750 JMYQ8N9B5 988 aa18.68■□□□□ 0.58
CNOT2-220ENST00000549750 ERVV-2B6SEH9 535 aa18.67■□□□□ 0.58
CNOT2-220ENST00000549750 AMOTQ4VCS5 1084 aa18.67■□□□□ 0.58
CNOT2-220ENST00000549750 PLEKHO1Q53GL0 409 aaPredicted RBP18.67■□□□□ 0.58
CNOT2-220ENST00000549750 TNS4Q8IZW8 715 aa18.67■□□□□ 0.58
CNOT2-220ENST00000549750 RBM46Q8TBY0 533 aaKnown RBP18.67■□□□□ 0.58
CNOT2-220ENST00000549750 NMRK2Q9NPI5 230 aa18.67■□□□□ 0.58
CNOT2-220ENST00000549750 PRELPP51888 382 aa18.66■□□□□ 0.58
CNOT2-220ENST00000549750 DCAF5Q96JK2 942 aa18.66■□□□□ 0.58
CNOT2-220ENST00000549750 PER1O15534 1290 aaPredicted RBP18.65■□□□□ 0.58
CNOT2-220ENST00000549750 SSFA2P28290 1259 aa18.65■□□□□ 0.58
CNOT2-220ENST00000549750 SMIM5Q71RC9 77 aa18.65■□□□□ 0.58
CNOT2-220ENST00000549750 ATG3Q9NT62 314 aa18.65■□□□□ 0.58
CNOT2-220ENST00000549750 ASAP1Q9ULH1 1129 aa18.65■□□□□ 0.58
CNOT2-220ENST00000549750 KDM6AO15550 1401 aaPredicted RBP18.65■□□□□ 0.58
CNOT2-220ENST00000549750 PCNTO95613 3336 aa18.64■□□□□ 0.58
CNOT2-220ENST00000549750 CICQ96RK0 1608 aaPredicted RBP18.64■□□□□ 0.57
CNOT2-220ENST00000549750 IL13P35225 146 aa18.64■□□□□ 0.57
CNOT2-220ENST00000549750 ARHGAP27Q6ZUM4 889 aa18.64■□□□□ 0.57
CNOT2-220ENST00000549750 C16orf71Q8IYS4 520 aaPredicted RBP18.64■□□□□ 0.57
CNOT2-220ENST00000549750 HTRA3P83110 453 aa18.63■□□□□ 0.57
CNOT2-220ENST00000549750 FSTL1Q12841 308 aa18.63■□□□□ 0.57
CNOT2-220ENST00000549750 AEBP1Q8IUX7 1158 aa18.63■□□□□ 0.57
CNOT2-220ENST00000549750 LINC00116Q8NCU8 138 aa18.63■□□□□ 0.57
CNOT2-220ENST00000549750 BCS1LQ9Y276 419 aa18.63■□□□□ 0.57
CNOT2-220ENST00000549750 NPC1L1Q9UHC9 1359 aa18.63■□□□□ 0.57
CNOT2-220ENST00000549750 TGFB2P61812 414 aa18.62■□□□□ 0.57
CNOT2-220ENST00000549750 ITPK1Q13572 414 aa18.62■□□□□ 0.57
CNOT2-220ENST00000549750 COL5A3P25940 1745 aaPredicted RBP18.62■□□□□ 0.57
CNOT2-220ENST00000549750 WDR90Q96KV7 1748 aa18.61■□□□□ 0.57
CNOT2-220ENST00000549750 ATP6V1AP38606 617 aa18.61■□□□□ 0.57
CNOT2-220ENST00000549750 ZNF530Q6P9A1 599 aaPredicted RBP18.61■□□□□ 0.57
CNOT2-220ENST00000549750 A0A0G2JLW4 131 aa18.6■□□□□ 0.57
CNOT2-220ENST00000549750 MMP10P09238 476 aa18.6■□□□□ 0.57
CNOT2-220ENST00000549750 SULT6B1Q6IMI4 303 aa18.6■□□□□ 0.57
CNOT2-220ENST00000549750 SCN11AQ9UI33 1791 aa18.6■□□□□ 0.57
CNOT2-220ENST00000549750 PXDNLA1KZ92 1463 aa18.58■□□□□ 0.57
CNOT2-220ENST00000549750 MTHFSP49914 203 aa18.58■□□□□ 0.56
CNOT2-220ENST00000549750 C1orf141Q5JVX7 400 aa18.58■□□□□ 0.56
CNOT2-220ENST00000549750 C9orf131Q5VYM1 1079 aa18.57■□□□□ 0.56
CNOT2-220ENST00000549750 SLC4A9Q96Q91 983 aa18.57■□□□□ 0.56
CNOT2-220ENST00000549750 CNTNAP4Q9C0A0 1308 aa18.56■□□□□ 0.56
CNOT2-220ENST00000549750 GNPATO15228 680 aa18.56■□□□□ 0.56
CNOT2-220ENST00000549750 FCHSD2O94868 740 aa18.56■□□□□ 0.56
CNOT2-220ENST00000549750 CABP4P57796 275 aa18.56■□□□□ 0.56
CNOT2-220ENST00000549750 RC3H1Q5TC82 1133 aaKnown RBP18.56■□□□□ 0.56
CNOT2-220ENST00000549750 MRC1P22897 1456 aa18.56■□□□□ 0.56
CNOT2-220ENST00000549750 ADAMTS7Q9UKP4 1686 aa18.56■□□□□ 0.56
CNOT2-220ENST00000549750 KDM2BQ8NHM5 1336 aa18.55■□□□□ 0.56
CNOT2-220ENST00000549750 COL3A1P02461 1466 aaPredicted RBP18.54■□□□□ 0.56
CNOT2-220ENST00000549750 DPEP1P16444 411 aa18.54■□□□□ 0.56
CNOT2-220ENST00000549750 ADRA2BP18089 450 aa18.54■□□□□ 0.56
CNOT2-220ENST00000549750 AKAP4Q5JQC9 854 aa18.54■□□□□ 0.56
CNOT2-220ENST00000549750 NLGN1Q8N2Q7 840 aa18.54■□□□□ 0.56
CNOT2-220ENST00000549750 MYH14Q7Z406 1995 aaKnown RBP18.53■□□□□ 0.56
CNOT2-220ENST00000549750 CCDC87Q9NVE4 849 aa18.53■□□□□ 0.56
CNOT2-220ENST00000549750 RTCBQ9Y3I0 505 aaKnown RBP18.53■□□□□ 0.56
CNOT2-220ENST00000549750 VIRMAQ69YN4 1812 aaKnown RBP18.53■□□□□ 0.56
CNOT2-220ENST00000549750 TJP1Q07157 1748 aa18.52■□□□□ 0.56
CNOT2-220ENST00000549750 KIF13BQ9NQT8 1826 aa18.52■□□□□ 0.56
CNOT2-220ENST00000549750 DIAPH1O60610 1272 aaKnown RBP18.52■□□□□ 0.56
CNOT2-220ENST00000549750 CC2D1BQ5T0F9 858 aaKnown RBP18.52■□□□□ 0.56
CNOT2-220ENST00000549750 NFATC2IPQ8NCF5 419 aa18.52■□□□□ 0.56
CNOT2-220ENST00000549750 RBM42Q9BTD8 480 aaKnown RBP18.52■□□□□ 0.56
CNOT2-220ENST00000549750 RRAGCQ9HB90 399 aa18.52■□□□□ 0.56
CNOT2-220ENST00000549750 N4BP2Q86UW6 1770 aaPredicted RBP18.51■□□□□ 0.55
CNOT2-220ENST00000549750 TRAPPC3LQ5T215 181 aa18.51■□□□□ 0.55
CNOT2-220ENST00000549750 SMC1BQ8NDV3 1235 aa18.51■□□□□ 0.55
CNOT2-220ENST00000549750 C4AP0C0L4 1744 aa18.51■□□□□ 0.55
CNOT2-220ENST00000549750 RPS6KA4O75676 772 aa18.5■□□□□ 0.55
CNOT2-220ENST00000549750 C10orf71Q711Q0 1435 aa18.49■□□□□ 0.55
CNOT2-220ENST00000549750 SLC52A2Q9HAB3 445 aa18.49■□□□□ 0.55
CNOT2-220ENST00000549750 PIM2Q9P1W9 311 aa18.49■□□□□ 0.55
CNOT2-220ENST00000549750 KIAA1551Q9HCM1 1747 aa18.49■□□□□ 0.55
CNOT2-220ENST00000549750 KCPQ6ZWJ8 1503 aa18.49■□□□□ 0.55
CNOT2-220ENST00000549750 HMOX1P09601 288 aa18.48■□□□□ 0.55
CNOT2-220ENST00000549750 KCNA3P22001 575 aa18.48■□□□□ 0.55
CNOT2-220ENST00000549750 ARHGEF1Q92888 912 aaKnown RBP18.48■□□□□ 0.55
CNOT2-220ENST00000549750 RNF181Q9P0P0 153 aa18.48■□□□□ 0.55
CNOT2-220ENST00000549750 PARP3Q9Y6F1 533 aa18.48■□□□□ 0.55
CNOT2-220ENST00000549750 HSPA1AP0DMV8 641 aaKnown RBP18.47■□□□□ 0.55
CNOT2-220ENST00000549750 HSPA1BP0DMV9 641 aaKnown RBP18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms