RNA–Protein interactions for RNA: ENST00000549526.1

SMARCD1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 5

Gene SMARCD1, Length 401 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-207ENST00000549526 DPY19L2Q6NUT2 758 aa12.02□□□□□ -0.49
SMARCD1-207ENST00000549526 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.02□□□□□ -0.49
SMARCD1-207ENST00000549526 CENPJQ9HC77 1338 aaPredicted RBP12.02□□□□□ -0.49
SMARCD1-207ENST00000549526 LMNB1P20700 586 aa12.01□□□□□ -0.49
SMARCD1-207ENST00000549526 LINC00116Q8NCU8 138 aa12.01□□□□□ -0.49
SMARCD1-207ENST00000549526 FAM208AQ9UK61 1670 aaKnown RBP12□□□□□ -0.49
SMARCD1-207ENST00000549526 TMEM88BA6NKF7 163 aa12□□□□□ -0.49
SMARCD1-207ENST00000549526 TRAPPC3LQ5T215 181 aa12□□□□□ -0.49
SMARCD1-207ENST00000549526 KTN1Q86UP2 1357 aaKnown RBP12□□□□□ -0.49
SMARCD1-207ENST00000549526 C4AP0C0L4 1744 aa12□□□□□ -0.49
SMARCD1-207ENST00000549526 IP6K1Q92551 441 aa11.99□□□□□ -0.49
SMARCD1-207ENST00000549526 ITGB4P16144 1822 aa11.98□□□□□ -0.49
SMARCD1-207ENST00000549526 RGPD2P0DJD1 1756 aa11.98□□□□□ -0.49
SMARCD1-207ENST00000549526 LOC102724428A0A0B4J2F2 783 aa11.98□□□□□ -0.49
SMARCD1-207ENST00000549526 POTEIP0CG38 1075 aa11.98□□□□□ -0.49
SMARCD1-207ENST00000549526 POTEJP0CG39 1038 aa11.98□□□□□ -0.49
SMARCD1-207ENST00000549526 CHRNA5P30532 468 aa11.98□□□□□ -0.49
SMARCD1-207ENST00000549526 SIK1P57059 783 aa11.98□□□□□ -0.49
SMARCD1-207ENST00000549526 DEFB115Q30KQ5 88 aa11.98□□□□□ -0.49
SMARCD1-207ENST00000549526 BEGAINQ9BUH8 593 aa11.98□□□□□ -0.49
SMARCD1-207ENST00000549526 EVC2Q86UK5 1308 aa11.97□□□□□ -0.49
SMARCD1-207ENST00000549526 NBPF1Q3BBV0 1214 aa11.97□□□□□ -0.49
SMARCD1-207ENST00000549526 PRPF38BQ5VTL8 546 aaKnown RBP11.97□□□□□ -0.49
SMARCD1-207ENST00000549526 NME9Q86XW9 330 aa11.97□□□□□ -0.49
SMARCD1-207ENST00000549526 RTCBQ9Y3I0 505 aaKnown RBP11.97□□□□□ -0.49
SMARCD1-207ENST00000549526 TIAM2Q8IVF5 1701 aa11.97□□□□□ -0.49
SMARCD1-207ENST00000549526 MEGF6O75095 1541 aa11.96□□□□□ -0.49
SMARCD1-207ENST00000549526 KDM6AO15550 1401 aaPredicted RBP11.96□□□□□ -0.49
SMARCD1-207ENST00000549526 USP31Q70CQ4 1352 aa11.96□□□□□ -0.49
SMARCD1-207ENST00000549526 PASKQ96RG2 1323 aa11.96□□□□□ -0.49
SMARCD1-207ENST00000549526 WDR33Q9C0J8 1336 aaKnown RBP11.96□□□□□ -0.49
SMARCD1-207ENST00000549526 ATP6V1AP38606 617 aa11.96□□□□□ -0.49
SMARCD1-207ENST00000549526 GYS1P13807 737 aa11.95□□□□□ -0.5
SMARCD1-207ENST00000549526 RFC4P35249 363 aa11.95□□□□□ -0.5
SMARCD1-207ENST00000549526 ITPK1Q13572 414 aa11.95□□□□□ -0.5
SMARCD1-207ENST00000549526 RAPGEF4Q8WZA2 1011 aa11.95□□□□□ -0.5
SMARCD1-207ENST00000549526 PIGBQ92521 554 aa11.95□□□□□ -0.5
SMARCD1-207ENST00000549526 MCOLN1Q9GZU1 580 aa11.95□□□□□ -0.5
SMARCD1-207ENST00000549526 CGNL1Q0VF96 1302 aa11.94□□□□□ -0.5
SMARCD1-207ENST00000549526 ARHGEF1Q92888 912 aaKnown RBP11.94□□□□□ -0.5
SMARCD1-207ENST00000549526 MAP2P11137 1827 aaKnown RBP11.94□□□□□ -0.5
SMARCD1-207ENST00000549526 PCDH11XQ9BZA7 1347 aa11.93□□□□□ -0.5
SMARCD1-207ENST00000549526 PCDH11YQ9BZA8 1340 aa11.93□□□□□ -0.5
SMARCD1-207ENST00000549526 RASSF10A6NK89 507 aa11.93□□□□□ -0.5
SMARCD1-207ENST00000549526 TATP17735 454 aaPredicted RBP11.93□□□□□ -0.5
SMARCD1-207ENST00000549526 ZNF219Q9P2Y4 722 aaPredicted RBP11.92□□□□□ -0.5
SMARCD1-207ENST00000549526 TSKSQ9UJT2 592 aa11.92□□□□□ -0.5
SMARCD1-207ENST00000549526 CASP8AP2Q9UKL3 1982 aa11.91□□□□□ -0.5
SMARCD1-207ENST00000549526 ITGBL1O95965 494 aaPredicted RBP11.91□□□□□ -0.5
SMARCD1-207ENST00000549526 AMPHP49418 695 aa11.91□□□□□ -0.5
SMARCD1-207ENST00000549526 DGKZQ13574 1117 aa11.91□□□□□ -0.5
SMARCD1-207ENST00000549526 ERFEQ4G0M1 354 aa11.91□□□□□ -0.5
SMARCD1-207ENST00000549526 NBPF6Q5VWK0 638 aa11.91□□□□□ -0.5
SMARCD1-207ENST00000549526 LDHDQ86WU2 507 aa11.91□□□□□ -0.5
SMARCD1-207ENST00000549526 USHBP1Q8N6Y0 703 aa11.91□□□□□ -0.5
SMARCD1-207ENST00000549526 NBPF4Q96M43 638 aa11.91□□□□□ -0.5
SMARCD1-207ENST00000549526 ABT1Q9ULW3 272 aaKnown RBP11.91□□□□□ -0.5
SMARCD1-207ENST00000549526 MON2Q7Z3U7 1717 aa11.91□□□□□ -0.5
SMARCD1-207ENST00000549526 DDNO94850 711 aaPredicted RBP11.9□□□□□ -0.5
SMARCD1-207ENST00000549526 ADRA2BP18089 450 aa11.9□□□□□ -0.5
SMARCD1-207ENST00000549526 HOXC9P31274 260 aa11.9□□□□□ -0.5
SMARCD1-207ENST00000549526 GRM1Q13255 1194 aa11.9□□□□□ -0.5
SMARCD1-207ENST00000549526 PAXIP1Q6ZW49 1069 aaPredicted RBP11.9□□□□□ -0.5
SMARCD1-207ENST00000549526 ASAP1Q9ULH1 1129 aa11.9□□□□□ -0.5
SMARCD1-207ENST00000549526 CLEC11AQ9Y240 323 aa11.9□□□□□ -0.5
SMARCD1-207ENST00000549526 CYP27B1O15528 508 aa11.89□□□□□ -0.51
SMARCD1-207ENST00000549526 SOX10P56693 466 aa11.89□□□□□ -0.51
SMARCD1-207ENST00000549526 DICER1Q9UPY3 1922 aaKnown RBP11.88□□□□□ -0.51
SMARCD1-207ENST00000549526 IQCA1LA6NCM1 817 aa11.88□□□□□ -0.51
SMARCD1-207ENST00000549526 EAPPQ56P03 285 aaPredicted RBP11.88□□□□□ -0.51
SMARCD1-207ENST00000549526 TTLL6Q8N841 843 aa11.88□□□□□ -0.51
SMARCD1-207ENST00000549526 GPR101Q96P66 508 aaPredicted RBP11.88□□□□□ -0.51
SMARCD1-207ENST00000549526 TMOD3Q9NYL9 352 aa11.88□□□□□ -0.51
SMARCD1-207ENST00000549526 NFKBIEO00221 500 aa11.87□□□□□ -0.51
SMARCD1-207ENST00000549526 RPS6KA4O75676 772 aa11.87□□□□□ -0.51
SMARCD1-207ENST00000549526 DDR1Q08345 913 aa11.87□□□□□ -0.51
SMARCD1-207ENST00000549526 CD163L1Q9NR16 1453 aa11.87□□□□□ -0.51
SMARCD1-207ENST00000549526 FBLN1P23142 703 aa11.86□□□□□ -0.51
SMARCD1-207ENST00000549526 ECE1P42892 770 aa11.86□□□□□ -0.51
SMARCD1-207ENST00000549526 FKBP8Q14318 412 aa11.86□□□□□ -0.51
SMARCD1-207ENST00000549526 GCC1Q96CN9 775 aa11.86□□□□□ -0.51
SMARCD1-207ENST00000549526 CAPNS2Q96L46 248 aa11.86□□□□□ -0.51
SMARCD1-207ENST00000549526 TAF1DQ9H5J8 278 aaPredicted RBP11.86□□□□□ -0.51
SMARCD1-207ENST00000549526 SBNO2Q9Y2G9 1366 aa11.86□□□□□ -0.51
SMARCD1-207ENST00000549526 MAP3K19Q56UN5 1328 aa11.86□□□□□ -0.51
SMARCD1-207ENST00000549526 RC3H1Q5TC82 1133 aaKnown RBP11.85□□□□□ -0.51
SMARCD1-207ENST00000549526 HDGFL2Q7Z4V5 671 aaPredicted RBP11.85□□□□□ -0.51
SMARCD1-207ENST00000549526 CNTROBQ8N137 903 aa11.85□□□□□ -0.51
SMARCD1-207ENST00000549526 RBM42Q9BTD8 480 aaKnown RBP11.85□□□□□ -0.51
SMARCD1-207ENST00000549526 SCN4AP35499 1836 aa11.84□□□□□ -0.51
SMARCD1-207ENST00000549526 CYP4F22Q6NT55 531 aa11.84□□□□□ -0.51
SMARCD1-207ENST00000549526 TMC1Q8TDI8 760 aa11.84□□□□□ -0.51
SMARCD1-207ENST00000549526 ATG3Q9NT62 314 aa11.84□□□□□ -0.51
SMARCD1-207ENST00000549526 SRP68Q9UHB9 627 aaKnown RBP11.84□□□□□ -0.51
SMARCD1-207ENST00000549526 POLRMTO00411 1230 aaKnown RBP11.83□□□□□ -0.52
SMARCD1-207ENST00000549526 CA12O43570 354 aa11.83□□□□□ -0.52
SMARCD1-207ENST00000549526 MAP1SQ66K74 1059 aaPredicted RBP11.83□□□□□ -0.52
SMARCD1-207ENST00000549526 NKX1-1Q15270 411 aaPredicted RBP11.82□□□□□ -0.52
SMARCD1-207ENST00000549526 SMG6Q86US8 1419 aaKnown RBP11.81□□□□□ -0.52
SMARCD1-207ENST00000549526 H0YIN7 160 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms