RNA–Protein interactions for RNA: ENST00000548421.2

BRF1-213, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 1,452 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-213ENST00000548421 SLC52A2Q9HAB3 445 aa37.35■■■■□ 3.57
BRF1-213ENST00000548421 TSPYL4Q9UJ04 414 aa37.34■■■■□ 3.57
BRF1-213ENST00000548421 ERVV-2B6SEH9 535 aa37.33■■■■□ 3.57
BRF1-213ENST00000548421 MARCH10Q8NA82 808 aaPredicted RBP37.33■■■■□ 3.57
BRF1-213ENST00000548421 DOT1LQ8TEK3 1739 aa37.31■■■■□ 3.56
BRF1-213ENST00000548421 SEPT12Q8IYM1 358 aa37.31■■■■□ 3.56
BRF1-213ENST00000548421 MIS18AQ9NYP9 233 aa37.31■■■■□ 3.56
BRF1-213ENST00000548421 ITGB4P16144 1822 aa37.3■■■■□ 3.56
BRF1-213ENST00000548421 CABP4P57796 275 aa37.3■■■■□ 3.56
BRF1-213ENST00000548421 RGS17Q9UGC6 210 aaPredicted RBP37.3■■■■□ 3.56
BRF1-213ENST00000548421 BTBD11A6QL63 1104 aa37.29■■■■□ 3.56
BRF1-213ENST00000548421 NFATC2IPQ8NCF5 419 aa37.28■■■■□ 3.56
BRF1-213ENST00000548421 EXOSC9Q06265 439 aaKnown RBP37.26■■■■□ 3.56
BRF1-213ENST00000548421 BRWD3Q6RI45 1802 aa37.25■■■■□ 3.55
BRF1-213ENST00000548421 KAT6BQ8WYB5 2073 aa37.25■■■■□ 3.55
BRF1-213ENST00000548421 RXRBP28702 533 aa37.24■■■■□ 3.55
BRF1-213ENST00000548421 CT47B1P0C2W7 299 aaPredicted RBP37.22■■■■□ 3.55
BRF1-213ENST00000548421 PAPPAQ13219 1627 aa37.21■■■■□ 3.55
BRF1-213ENST00000548421 TMOD3Q9NYL9 352 aa37.21■■■■□ 3.55
BRF1-213ENST00000548421 POTEAQ6S8J7 498 aa37.18■■■■□ 3.54
BRF1-213ENST00000548421 RCAN3Q9UKA8 241 aa37.18■■■■□ 3.54
BRF1-213ENST00000548421 BCL9O00512 1426 aa37.17■■■■□ 3.54
BRF1-213ENST00000548421 ZNF790Q6PG37 636 aa37.16■■■■□ 3.54
BRF1-213ENST00000548421 C8orf58Q8NAV2 365 aa37.16■■■■□ 3.54
BRF1-213ENST00000548421 UBR2Q8IWV8 1755 aa37.15■■■■□ 3.54
BRF1-213ENST00000548421 KCNQ3O43525 872 aa37.14■■■■□ 3.54
BRF1-213ENST00000548421 PRIM1P49642 420 aaKnown RBP37.13■■■■□ 3.54
BRF1-213ENST00000548421 EIF4A1P60842 406 aaKnown RBP37.13■■■■□ 3.54
BRF1-213ENST00000548421 SLC39A6Q13433 755 aa37.13■■■■□ 3.54
BRF1-213ENST00000548421 TWISTNBQ3B726 338 aaPredicted RBP37.13■■■■□ 3.54
BRF1-213ENST00000548421 TSPYL6Q8N831 410 aa37.13■■■■□ 3.54
BRF1-213ENST00000548421 SYTL4Q96C24 671 aaPredicted RBP37.13■■■■□ 3.54
BRF1-213ENST00000548421 KRT24Q2M2I5 525 aa37.13■■■■□ 3.53
BRF1-213ENST00000548421 TTC5Q8N0Z6 440 aa37.13■■■■□ 3.53
BRF1-213ENST00000548421 PIGBQ92521 554 aa37.13■■■■□ 3.53
BRF1-213ENST00000548421 SOCS7O14512 581 aa37.12■■■■□ 3.53
BRF1-213ENST00000548421 KRT27Q7Z3Y8 459 aa37.12■■■■□ 3.53
BRF1-213ENST00000548421 ACSBG1Q96GR2 724 aa37.12■■■■□ 3.53
BRF1-213ENST00000548421 RGS12O14924 1447 aa37.12■■■■□ 3.53
BRF1-213ENST00000548421 NHSQ6T4R5 1651 aa37.11■■■■□ 3.53
BRF1-213ENST00000548421 SBF2Q86WG5 1849 aa37.11■■■■□ 3.53
BRF1-213ENST00000548421 ELL2O00472 640 aaPredicted RBP37.1■■■■□ 3.53
BRF1-213ENST00000548421 VAMP4O75379 141 aa37.09■■■■□ 3.53
BRF1-213ENST00000548421 ZNF428Q96B54 188 aa37.09■■■■□ 3.53
BRF1-213ENST00000548421 SOS1Q07889 1333 aaPredicted RBP37.09■■■■□ 3.53
BRF1-213ENST00000548421 FAM182BQ5T319 152 aa37.07■■■■□ 3.53
BRF1-213ENST00000548421 HEG1Q9ULI3 1381 aa37.07■■■■□ 3.53
BRF1-213ENST00000548421 KCPQ6ZWJ8 1503 aa37.06■■■■□ 3.52
BRF1-213ENST00000548421 RARSP54136 660 aaKnown RBP37.05■■■■□ 3.52
BRF1-213ENST00000548421 HOXB7P09629 217 aa37.04■■■■□ 3.52
BRF1-213ENST00000548421 FMNL2Q96PY5 1086 aa37.04■■■■□ 3.52
BRF1-213ENST00000548421 ZNF496Q96IT1 587 aaPredicted RBP37.03■■■■□ 3.52
BRF1-213ENST00000548421 SUPT16HQ9Y5B9 1047 aaKnown RBP37.03■■■■□ 3.52
BRF1-213ENST00000548421 C5P01031 1676 aa37.02■■■■□ 3.52
BRF1-213ENST00000548421 ATG3Q9NT62 314 aa37.02■■■■□ 3.52
BRF1-213ENST00000548421 ASAP1Q9ULH1 1129 aa37.02■■■■□ 3.52
BRF1-213ENST00000548421 KCNQ2O43526 872 aa37.01■■■■□ 3.52
BRF1-213ENST00000548421 GIGYF1O75420 1035 aaPredicted RBP37.01■■■■□ 3.51
BRF1-213ENST00000548421 ALDH1L2Q3SY69 923 aa37.01■■■■□ 3.51
BRF1-213ENST00000548421 FAM196AQ6ZSG2 479 aa37.01■■■■□ 3.51
BRF1-213ENST00000548421 BTAF1O14981 1849 aa37■■■■□ 3.51
BRF1-213ENST00000548421 LAMB4A4D0S4 1761 aa36.98■■■■□ 3.51
BRF1-213ENST00000548421 SSH1Q8WYL5 1049 aa36.98■■■■□ 3.51
BRF1-213ENST00000548421 BCAR3O75815 825 aa36.96■■■■□ 3.51
BRF1-213ENST00000548421 CHMP4AQ9BY43 222 aa36.96■■■■□ 3.51
BRF1-213ENST00000548421 SMC4Q9NTJ3 1288 aa36.96■■■■□ 3.51
BRF1-213ENST00000548421 EP400Q96L91 3159 aa36.96■■■■□ 3.51
BRF1-213ENST00000548421 SNRPA1P09661 255 aaKnown RBP36.95■■■■□ 3.51
BRF1-213ENST00000548421 BCL2L13Q9BXK5 485 aa36.95■■■■□ 3.51
BRF1-213ENST00000548421 RNF123Q5XPI4 1314 aa36.95■■■■□ 3.51
BRF1-213ENST00000548421 CACNA1FO60840 1977 aa36.95■■■■□ 3.51
BRF1-213ENST00000548421 PTCD1O75127 700 aaKnown RBP36.94■■■■□ 3.5
BRF1-213ENST00000548421 HDGFL1Q5TGJ6 251 aa36.93■■■■□ 3.5
BRF1-213ENST00000548421 CCDC30Q5VVM6 783 aa36.93■■■■□ 3.5
BRF1-213ENST00000548421 SMARCC1Q92922 1105 aaPredicted RBP36.92■■■■□ 3.5
BRF1-213ENST00000548421 PRAMEF22A3QJZ6 481 aa36.91■■■■□ 3.5
BRF1-213ENST00000548421 RRP1P56182 461 aaKnown RBP36.91■■■■□ 3.5
BRF1-213ENST00000548421 VSIG10Q8N0Z9 540 aa36.9■■■■□ 3.5
BRF1-213ENST00000548421 PALLDQ8WX93 1383 aa36.89■■■■□ 3.5
BRF1-213ENST00000548421 EIF2S2P20042 333 aaKnown RBP36.89■■■■□ 3.5
BRF1-213ENST00000548421 PTF1AQ7RTS3 328 aa36.89■■■■□ 3.5
BRF1-213ENST00000548421 BCL11BQ9C0K0 894 aaPredicted RBP36.89■■■■□ 3.5
BRF1-213ENST00000548421 TCERG1O14776 1098 aaKnown RBP36.88■■■■□ 3.5
BRF1-213ENST00000548421 BRPF1P55201 1214 aaPredicted RBP36.88■■■■□ 3.5
BRF1-213ENST00000548421 RBM42Q9BTD8 480 aaKnown RBP36.88■■■■□ 3.5
BRF1-213ENST00000548421 MRPL50Q8N5N7 158 aaKnown RBP36.88■■■■□ 3.49
BRF1-213ENST00000548421 GOLGA6L2Q8N9W4 650 aaPredicted RBP36.88■■■■□ 3.49
BRF1-213ENST00000548421 NECTIN2Q92692 538 aa36.88■■■■□ 3.49
BRF1-213ENST00000548421 STK31Q9BXU1 1019 aa36.88■■■■□ 3.49
BRF1-213ENST00000548421 KIF16BQ96L93 1317 aa36.86■■■■□ 3.49
BRF1-213ENST00000548421 CICQ96RK0 1608 aaPredicted RBP36.86■■■■□ 3.49
BRF1-213ENST00000548421 ZNF831Q5JPB2 1677 aa36.85■■■■□ 3.49
BRF1-213ENST00000548421 TJP1Q07157 1748 aa36.85■■■■□ 3.49
BRF1-213ENST00000548421 TEX13AQ9BXU3 409 aaPredicted RBP36.83■■■■□ 3.49
BRF1-213ENST00000548421 USP16Q9Y5T5 823 aa36.83■■■■□ 3.49
BRF1-213ENST00000548421 LY75O60449 1722 aa36.82■■■■□ 3.48
BRF1-213ENST00000548421 SLC4A2P04920 1241 aa36.82■■■■□ 3.48
BRF1-213ENST00000548421 CANXP27824 592 aaKnown RBP36.82■■■■□ 3.48
BRF1-213ENST00000548421 FRAT1Q92837 279 aaPredicted RBP36.82■■■■□ 3.48
BRF1-213ENST00000548421 SLC4A9Q96Q91 983 aa36.82■■■■□ 3.48
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms