RNA–Protein interactions for RNA: ENST00000548080.5

HDAC7-227, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 1,479 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-227ENST00000548080 MAPK8IP3Q9UPT6 1336 aa22.87■■□□□ 1.25
HDAC7-227ENST00000548080 LRRC4BQ9NT99 713 aa22.87■■□□□ 1.25
HDAC7-227ENST00000548080 NEFMP07197 916 aa22.86■■□□□ 1.25
HDAC7-227ENST00000548080 DCTN1Q14203 1278 aa22.86■■□□□ 1.25
HDAC7-227ENST00000548080 IL17REQ8NFR9 667 aa22.86■■□□□ 1.25
HDAC7-227ENST00000548080 PSDA5PKW4 1024 aaPredicted RBP22.85■■□□□ 1.25
HDAC7-227ENST00000548080 MCM10Q7L590 875 aa22.85■■□□□ 1.25
HDAC7-227ENST00000548080 SLC52A2Q9HAB3 445 aa22.85■■□□□ 1.25
HDAC7-227ENST00000548080 ANO8Q9HCE9 1232 aaPredicted RBP22.85■■□□□ 1.25
HDAC7-227ENST00000548080 ATG3Q9NT62 314 aa22.85■■□□□ 1.25
HDAC7-227ENST00000548080 RRP7AQ9Y3A4 280 aaKnown RBP22.85■■□□□ 1.25
HDAC7-227ENST00000548080 SENP3-EIF4A1A0A087X0R7 540 aa22.84■■□□□ 1.25
HDAC7-227ENST00000548080 MRC1P22897 1456 aa22.83■■□□□ 1.25
HDAC7-227ENST00000548080 R3HDM1Q15032 1099 aaKnown RBP22.83■■□□□ 1.25
HDAC7-227ENST00000548080 NFE2L2Q16236 605 aa22.83■■□□□ 1.25
HDAC7-227ENST00000548080 PNNQ9H307 717 aaKnown RBP22.83■■□□□ 1.25
HDAC7-227ENST00000548080 CCNL1Q9UK58 526 aaPredicted RBP22.83■■□□□ 1.25
HDAC7-227ENST00000548080 SLC39A6Q13433 755 aa22.81■■□□□ 1.24
HDAC7-227ENST00000548080 NEUROD2Q15784 382 aa22.81■■□□□ 1.24
HDAC7-227ENST00000548080 SMARCC1Q92922 1105 aaPredicted RBP22.81■■□□□ 1.24
HDAC7-227ENST00000548080 RUNDC1Q96C34 613 aa22.81■■□□□ 1.24
HDAC7-227ENST00000548080 SIPA1L3O60292 1781 aaPredicted RBP22.81■■□□□ 1.24
HDAC7-227ENST00000548080 RTF1Q92541 710 aaKnown RBP22.8■■□□□ 1.24
HDAC7-227ENST00000548080 RBM42Q9BTD8 480 aaKnown RBP22.8■■□□□ 1.24
HDAC7-227ENST00000548080 THUMPD2Q9BTF0 503 aaKnown RBP22.8■■□□□ 1.24
HDAC7-227ENST00000548080 PAPPAQ13219 1627 aa22.8■■□□□ 1.24
HDAC7-227ENST00000548080 TEFQ10587 303 aa22.79■■□□□ 1.24
HDAC7-227ENST00000548080 CEMIPQ8WUJ3 1361 aa22.79■■□□□ 1.24
HDAC7-227ENST00000548080 PTCD1O75127 700 aaKnown RBP22.79■■□□□ 1.24
HDAC7-227ENST00000548080 C5P01031 1676 aa22.78■■□□□ 1.24
HDAC7-227ENST00000548080 TAF1LQ8IZX4 1826 aa22.78■■□□□ 1.24
HDAC7-227ENST00000548080 APAF1O14727 1248 aa22.78■■□□□ 1.24
HDAC7-227ENST00000548080 TMPOP42166 694 aaKnown RBP22.78■■□□□ 1.24
HDAC7-227ENST00000548080 RIPK4P57078 832 aa22.78■■□□□ 1.24
HDAC7-227ENST00000548080 ZNF827Q17R98 1081 aa22.78■■□□□ 1.24
HDAC7-227ENST00000548080 SLC27A3Q5K4L6 730 aa22.78■■□□□ 1.24
HDAC7-227ENST00000548080 NBPF14Q5TI25 921 aa22.78■■□□□ 1.24
HDAC7-227ENST00000548080 SALL2Q9Y467 1007 aaPredicted RBP22.78■■□□□ 1.24
HDAC7-227ENST00000548080 LOC102724428A0A0B4J2F2 783 aa22.77■■□□□ 1.24
HDAC7-227ENST00000548080 SIK1P57059 783 aa22.77■■□□□ 1.24
HDAC7-227ENST00000548080 NGEFQ8N5V2 710 aa22.77■■□□□ 1.24
HDAC7-227ENST00000548080 SLC4A9Q96Q91 983 aa22.77■■□□□ 1.24
HDAC7-227ENST00000548080 TUBGCP6Q96RT7 1819 aa22.74■■□□□ 1.23
HDAC7-227ENST00000548080 ATP6V1AP38606 617 aa22.74■■□□□ 1.23
HDAC7-227ENST00000548080 ITPK1Q13572 414 aa22.74■■□□□ 1.23
HDAC7-227ENST00000548080 STK32BQ9NY57 414 aa22.74■■□□□ 1.23
HDAC7-227ENST00000548080 HTATSF1O43719 755 aaKnown RBP22.73■■□□□ 1.23
HDAC7-227ENST00000548080 KCNQ3O43525 872 aa22.73■■□□□ 1.23
HDAC7-227ENST00000548080 SLC15A2Q16348 729 aa22.73■■□□□ 1.23
HDAC7-227ENST00000548080 LINC00116Q8NCU8 138 aa22.73■■□□□ 1.23
HDAC7-227ENST00000548080 KCPQ6ZWJ8 1503 aa22.72■■□□□ 1.23
HDAC7-227ENST00000548080 PDGFDQ9GZP0 370 aaPredicted RBP22.72■■□□□ 1.23
HDAC7-227ENST00000548080 MIS18AQ9NYP9 233 aa22.72■■□□□ 1.23
HDAC7-227ENST00000548080 BTBD11A6QL63 1104 aa22.71■■□□□ 1.23
HDAC7-227ENST00000548080 SMIM5Q71RC9 77 aa22.71■■□□□ 1.23
HDAC7-227ENST00000548080 AKT1S1Q96B36 256 aa22.71■■□□□ 1.23
HDAC7-227ENST00000548080 C4BP0C0L5 1744 aa22.71■■□□□ 1.23
HDAC7-227ENST00000548080 TJP1Q07157 1748 aa22.71■■□□□ 1.23
HDAC7-227ENST00000548080 UBR2Q8IWV8 1755 aa22.71■■□□□ 1.23
HDAC7-227ENST00000548080 NCBP3Q53F19 620 aaKnown RBP22.7■■□□□ 1.22
HDAC7-227ENST00000548080 TRIM35Q9UPQ4 493 aa22.7■■□□□ 1.22
HDAC7-227ENST00000548080 TTC5Q8N0Z6 440 aa22.69■■□□□ 1.22
HDAC7-227ENST00000548080 ZNF790Q6PG37 636 aa22.68■■□□□ 1.22
HDAC7-227ENST00000548080 COL5A3P25940 1745 aaPredicted RBP22.67■■□□□ 1.22
HDAC7-227ENST00000548080 ZNF521Q96K83 1311 aa22.67■■□□□ 1.22
HDAC7-227ENST00000548080 TFCP2L1Q9NZI6 479 aa22.67■■□□□ 1.22
HDAC7-227ENST00000548080 TAF7Q15545 349 aaPredicted RBP22.66■■□□□ 1.22
HDAC7-227ENST00000548080 AMIGO3Q86WK7 504 aa22.66■■□□□ 1.22
HDAC7-227ENST00000548080 DNAJC10Q8IXB1 793 aa22.66■■□□□ 1.22
HDAC7-227ENST00000548080 ZNF496Q96IT1 587 aaPredicted RBP22.66■■□□□ 1.22
HDAC7-227ENST00000548080 ZNF831Q5JPB2 1677 aa22.66■■□□□ 1.22
HDAC7-227ENST00000548080 LMOD3Q0VAK6 560 aa22.66■■□□□ 1.22
HDAC7-227ENST00000548080 CASZ1Q86V15 1759 aa22.65■■□□□ 1.22
HDAC7-227ENST00000548080 CCDC27Q2M243 656 aa22.65■■□□□ 1.22
HDAC7-227ENST00000548080 AK7Q96M32 723 aa22.65■■□□□ 1.22
HDAC7-227ENST00000548080 KDM3BQ7LBC6 1761 aa22.64■■□□□ 1.22
HDAC7-227ENST00000548080 PNPLA7Q6ZV29 1317 aa22.64■■□□□ 1.22
HDAC7-227ENST00000548080 MYH14Q7Z406 1995 aaKnown RBP22.64■■□□□ 1.21
HDAC7-227ENST00000548080 PHF14O94880 888 aa22.64■■□□□ 1.21
HDAC7-227ENST00000548080 UBR3Q6ZT12 1888 aa22.64■■□□□ 1.21
HDAC7-227ENST00000548080 GOLGA2Q08379 1002 aa22.63■■□□□ 1.21
HDAC7-227ENST00000548080 LAS1LQ9Y4W2 734 aaKnown RBP22.63■■□□□ 1.21
HDAC7-227ENST00000548080 GNPATO15228 680 aa22.62■■□□□ 1.21
HDAC7-227ENST00000548080 WWC1Q8IX03 1113 aa22.62■■□□□ 1.21
HDAC7-227ENST00000548080 CICQ96RK0 1608 aaPredicted RBP22.62■■□□□ 1.21
HDAC7-227ENST00000548080 QSER1Q2KHR3 1735 aa22.62■■□□□ 1.21
HDAC7-227ENST00000548080 PRAMEF22A3QJZ6 481 aa22.61■■□□□ 1.21
HDAC7-227ENST00000548080 MSH5O43196 834 aa22.61■■□□□ 1.21
HDAC7-227ENST00000548080 CDCA7LQ96GN5 454 aa22.61■■□□□ 1.21
HDAC7-227ENST00000548080 HEG1Q9ULI3 1381 aa22.61■■□□□ 1.21
HDAC7-227ENST00000548080 ZBTB7AO95365 584 aa22.6■■□□□ 1.21
HDAC7-227ENST00000548080 CRKLP46109 303 aaKnown RBP22.6■■□□□ 1.21
HDAC7-227ENST00000548080 FMNL2Q96PY5 1086 aa22.6■■□□□ 1.21
HDAC7-227ENST00000548080 TSPYL4Q9UJ04 414 aa22.6■■□□□ 1.21
HDAC7-227ENST00000548080 COL23A1Q86Y22 540 aaPredicted RBP22.59■■□□□ 1.21
HDAC7-227ENST00000548080 CYP19A1P11511 503 aaPredicted RBP22.58■■□□□ 1.2
HDAC7-227ENST00000548080 WDR63Q8IWG1 891 aa22.58■■□□□ 1.2
HDAC7-227ENST00000548080 SLFN5Q08AF3 891 aa22.57■■□□□ 1.2
HDAC7-227ENST00000548080 VSIG10Q8N0Z9 540 aa22.57■■□□□ 1.2
HDAC7-227ENST00000548080 ATF5Q9Y2D1 282 aaPredicted RBP22.57■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms