RNA–Protein interactions for RNA: ENST00000547923.1

TROAP-206, Transcript of trophinin associated protein, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TROAP, Length 1,652 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-206ENST00000547923 SLC52A2Q9HAB3 445 aa13.3□□□□□ -0.28
TROAP-206ENST00000547923 MRS2Q9HD23 443 aa13.3□□□□□ -0.28
TROAP-206ENST00000547923 RREB1Q92766 1687 aa13.3□□□□□ -0.28
TROAP-206ENST00000547923 RGPD3A6NKT7 1758 aaPredicted RBP13.3□□□□□ -0.28
TROAP-206ENST00000547923 RGPD4Q7Z3J3 1758 aa13.3□□□□□ -0.28
TROAP-206ENST00000547923 MSH5O43196 834 aa13.29□□□□□ -0.28
TROAP-206ENST00000547923 PTCD1O75127 700 aaKnown RBP13.29□□□□□ -0.28
TROAP-206ENST00000547923 ATG3Q9NT62 314 aa13.29□□□□□ -0.28
TROAP-206ENST00000547923 NUP188Q5SRE5 1749 aa13.28□□□□□ -0.28
TROAP-206ENST00000547923 LOC102724428A0A0B4J2F2 783 aa13.28□□□□□ -0.28
TROAP-206ENST00000547923 SIK1P57059 783 aa13.28□□□□□ -0.28
TROAP-206ENST00000547923 MCM10Q7L590 875 aa13.28□□□□□ -0.28
TROAP-206ENST00000547923 ADAMTS8Q9UP79 889 aa13.28□□□□□ -0.28
TROAP-206ENST00000547923 SCN11AQ9UI33 1791 aa13.28□□□□□ -0.28
TROAP-206ENST00000547923 ATP6V1AP38606 617 aa13.28□□□□□ -0.28
TROAP-206ENST00000547923 SLC15A2Q16348 729 aa13.28□□□□□ -0.28
TROAP-206ENST00000547923 IL17REQ8NFR9 667 aa13.28□□□□□ -0.28
TROAP-206ENST00000547923 TFCP2L1Q9NZI6 479 aa13.28□□□□□ -0.28
TROAP-206ENST00000547923 DCTN1Q14203 1278 aa13.27□□□□□ -0.29
TROAP-206ENST00000547923 NEUROD2Q15784 382 aa13.27□□□□□ -0.29
TROAP-206ENST00000547923 NFE2L2Q16236 605 aa13.27□□□□□ -0.29
TROAP-206ENST00000547923 TTC5Q8N0Z6 440 aa13.27□□□□□ -0.29
TROAP-206ENST00000547923 VIRMAQ69YN4 1812 aaKnown RBP13.26□□□□□ -0.29
TROAP-206ENST00000547923 LY75O60449 1722 aa13.26□□□□□ -0.29
TROAP-206ENST00000547923 HMGB2P26583 209 aaKnown RBP13.26□□□□□ -0.29
TROAP-206ENST00000547923 SLC39A6Q13433 755 aa13.26□□□□□ -0.29
TROAP-206ENST00000547923 RRP7AQ9Y3A4 280 aaKnown RBP13.26□□□□□ -0.29
TROAP-206ENST00000547923 ZNF827Q17R98 1081 aa13.25□□□□□ -0.29
TROAP-206ENST00000547923 RUNDC1Q96C34 613 aa13.25□□□□□ -0.29
TROAP-206ENST00000547923 AK7Q96M32 723 aa13.25□□□□□ -0.29
TROAP-206ENST00000547923 RIPK4P57078 832 aa13.24□□□□□ -0.29
TROAP-206ENST00000547923 BTBD11A6QL63 1104 aa13.24□□□□□ -0.29
TROAP-206ENST00000547923 HTATSF1O43719 755 aaKnown RBP13.24□□□□□ -0.29
TROAP-206ENST00000547923 ADAMTS7Q9UKP4 1686 aa13.23□□□□□ -0.29
TROAP-206ENST00000547923 LMOD3Q0VAK6 560 aa13.23□□□□□ -0.29
TROAP-206ENST00000547923 THUMPD2Q9BTF0 503 aaKnown RBP13.23□□□□□ -0.29
TROAP-206ENST00000547923 MRC1P22897 1456 aa13.23□□□□□ -0.29
TROAP-206ENST00000547923 PHF14O94880 888 aa13.22□□□□□ -0.29
TROAP-206ENST00000547923 TMPOP42166 694 aaKnown RBP13.22□□□□□ -0.29
TROAP-206ENST00000547923 ITPK1Q13572 414 aa13.22□□□□□ -0.29
TROAP-206ENST00000547923 AKT1S1Q96B36 256 aa13.22□□□□□ -0.29
TROAP-206ENST00000547923 CEMIPQ8WUJ3 1361 aa13.22□□□□□ -0.29
TROAP-206ENST00000547923 GNPATO15228 680 aa13.21□□□□□ -0.29
TROAP-206ENST00000547923 ZBTB7AO95365 584 aa13.21□□□□□ -0.29
TROAP-206ENST00000547923 ZNF790Q6PG37 636 aa13.21□□□□□ -0.29
TROAP-206ENST00000547923 LINC00116Q8NCU8 138 aa13.21□□□□□ -0.29
TROAP-206ENST00000547923 SLC4A9Q96Q91 983 aa13.21□□□□□ -0.29
TROAP-206ENST00000547923 PDGFDQ9GZP0 370 aaPredicted RBP13.21□□□□□ -0.29
TROAP-206ENST00000547923 DLG5Q8TDM6 1919 aa13.21□□□□□ -0.29
TROAP-206ENST00000547923 DIEXFQ68CQ4 756 aaKnown RBP13.21□□□□□ -0.3
TROAP-206ENST00000547923 FAM9BQ8IZU0 186 aa13.21□□□□□ -0.3
TROAP-206ENST00000547923 PNISRQ8TF01 805 aaKnown RBP13.21□□□□□ -0.3
TROAP-206ENST00000547923 PAPPAQ13219 1627 aa13.21□□□□□ -0.3
TROAP-206ENST00000547923 SENP3-EIF4A1A0A087X0R7 540 aa13.2□□□□□ -0.3
TROAP-206ENST00000547923 APAF1O14727 1248 aa13.2□□□□□ -0.3
TROAP-206ENST00000547923 PNPLA7Q6ZV29 1317 aa13.19□□□□□ -0.3
TROAP-206ENST00000547923 TAF7Q15545 349 aaPredicted RBP13.19□□□□□ -0.3
TROAP-206ENST00000547923 NCBP3Q53F19 620 aaKnown RBP13.19□□□□□ -0.3
TROAP-206ENST00000547923 DNAJC10Q8IXB1 793 aa13.19□□□□□ -0.3
TROAP-206ENST00000547923 ZNF496Q96IT1 587 aaPredicted RBP13.19□□□□□ -0.3
TROAP-206ENST00000547923 FMNL2Q96PY5 1086 aa13.19□□□□□ -0.3
TROAP-206ENST00000547923 SPON1Q9HCB6 807 aa13.19□□□□□ -0.3
TROAP-206ENST00000547923 MIS18AQ9NYP9 233 aa13.19□□□□□ -0.3
TROAP-206ENST00000547923 ATF5Q9Y2D1 282 aaPredicted RBP13.18□□□□□ -0.3
TROAP-206ENST00000547923 TAF1LQ8IZX4 1826 aa13.18□□□□□ -0.3
TROAP-206ENST00000547923 C5P01031 1676 aa13.18□□□□□ -0.3
TROAP-206ENST00000547923 SIPA1L3O60292 1781 aaPredicted RBP13.18□□□□□ -0.3
TROAP-206ENST00000547923 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.18□□□□□ -0.3
TROAP-206ENST00000547923 KCNQ3O43525 872 aa13.18□□□□□ -0.3
TROAP-206ENST00000547923 SMIM5Q71RC9 77 aa13.18□□□□□ -0.3
TROAP-206ENST00000547923 FLAD1Q8NFF5 587 aa13.18□□□□□ -0.3
TROAP-206ENST00000547923 PPP1R1BQ9UD71 204 aaPredicted RBP13.18□□□□□ -0.3
TROAP-206ENST00000547923 RTCBQ9Y3I0 505 aaKnown RBP13.18□□□□□ -0.3
TROAP-206ENST00000547923 LAS1LQ9Y4W2 734 aaKnown RBP13.18□□□□□ -0.3
TROAP-206ENST00000547923 CRKLP46109 303 aaKnown RBP13.17□□□□□ -0.3
TROAP-206ENST00000547923 STARD3NLO95772 234 aa13.16□□□□□ -0.3
TROAP-206ENST00000547923 COL23A1Q86Y22 540 aaPredicted RBP13.16□□□□□ -0.3
TROAP-206ENST00000547923 VSIG10Q8N0Z9 540 aa13.16□□□□□ -0.3
TROAP-206ENST00000547923 MTFR1LQ9H019 292 aa13.16□□□□□ -0.3
TROAP-206ENST00000547923 TSPYL4Q9UJ04 414 aa13.16□□□□□ -0.3
TROAP-206ENST00000547923 ZNF330Q9Y3S2 320 aaPredicted RBP13.16□□□□□ -0.3
TROAP-206ENST00000547923 C4BP0C0L5 1744 aa13.16□□□□□ -0.3
TROAP-206ENST00000547923 CNTNAP4Q9C0A0 1308 aa13.16□□□□□ -0.3
TROAP-206ENST00000547923 SSFA2P28290 1259 aa13.15□□□□□ -0.3
TROAP-206ENST00000547923 MSL1Q68DK7 614 aa13.15□□□□□ -0.3
TROAP-206ENST00000547923 AMIGO3Q86WK7 504 aa13.15□□□□□ -0.3
TROAP-206ENST00000547923 TRIM35Q9UPQ4 493 aa13.15□□□□□ -0.3
TROAP-206ENST00000547923 HEG1Q9ULI3 1381 aa13.15□□□□□ -0.3
TROAP-206ENST00000547923 KCPQ6ZWJ8 1503 aa13.15□□□□□ -0.3
TROAP-206ENST00000547923 TRAPPC3LQ5T215 181 aa13.15□□□□□ -0.31
TROAP-206ENST00000547923 NPM2Q86SE8 214 aaKnown RBP13.15□□□□□ -0.31
TROAP-206ENST00000547923 CCDC87Q9NVE4 849 aa13.15□□□□□ -0.31
TROAP-206ENST00000547923 SALL2Q9Y467 1007 aaPredicted RBP13.15□□□□□ -0.31
TROAP-206ENST00000547923 ZNF831Q5JPB2 1677 aa13.14□□□□□ -0.31
TROAP-206ENST00000547923 CYP19A1P11511 503 aaPredicted RBP13.14□□□□□ -0.31
TROAP-206ENST00000547923 CANXP27824 592 aaKnown RBP13.14□□□□□ -0.31
TROAP-206ENST00000547923 RC3H1Q5TC82 1133 aaKnown RBP13.14□□□□□ -0.31
TROAP-206ENST00000547923 SLC16A10Q8TF71 515 aa13.14□□□□□ -0.31
TROAP-206ENST00000547923 TEX13AQ9BXU3 409 aaPredicted RBP13.14□□□□□ -0.31
TROAP-206ENST00000547923 TUBGCP6Q96RT7 1819 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms