RNA–Protein interactions for RNA: ENST00000547176.3

KRT8-209, Transcript of keratin 8, humanhuman

TSL 5

Gene KRT8, Length 250 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT8-209ENST00000547176 PPP2R1AP30153 589 aa18.48■□□□□ 0.55
KRT8-209ENST00000547176 LINC00116Q8NCU8 138 aa18.48■□□□□ 0.55
KRT8-209ENST00000547176 PHF14O94880 888 aa18.47■□□□□ 0.55
KRT8-209ENST00000547176 MTHFSDQ2M296 383 aaKnown RBP18.47■□□□□ 0.55
KRT8-209ENST00000547176 KLHL34Q8N239 644 aa18.47■□□□□ 0.55
KRT8-209ENST00000547176 SYT17Q9BSW7 474 aa18.47■□□□□ 0.55
KRT8-209ENST00000547176 KDM6AO15550 1401 aaPredicted RBP18.47■□□□□ 0.55
KRT8-209ENST00000547176 ITPK1Q13572 414 aa18.46■□□□□ 0.55
KRT8-209ENST00000547176 LGR6Q9HBX8 967 aa18.46■□□□□ 0.55
KRT8-209ENST00000547176 PTCD1O75127 700 aaKnown RBP18.45■□□□□ 0.54
KRT8-209ENST00000547176 C5P01031 1676 aa18.44■□□□□ 0.54
KRT8-209ENST00000547176 QSER1Q2KHR3 1735 aa18.44■□□□□ 0.54
KRT8-209ENST00000547176 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.44■□□□□ 0.54
KRT8-209ENST00000547176 GNPATO15228 680 aa18.44■□□□□ 0.54
KRT8-209ENST00000547176 RNMTO43148 476 aaKnown RBP18.44■□□□□ 0.54
KRT8-209ENST00000547176 MSL1Q68DK7 614 aa18.44■□□□□ 0.54
KRT8-209ENST00000547176 SSFA2P28290 1259 aa18.43■□□□□ 0.54
KRT8-209ENST00000547176 GAS2L2Q8NHY3 880 aa18.43■□□□□ 0.54
KRT8-209ENST00000547176 SLC52A2Q9HAB3 445 aa18.43■□□□□ 0.54
KRT8-209ENST00000547176 U2AF1L5P0DN76 240 aaPredicted RBP18.42■□□□□ 0.54
KRT8-209ENST00000547176 U2AF1Q01081 240 aaKnown RBP eCLIP18.42■□□□□ 0.54
KRT8-209ENST00000547176 SMIM5Q71RC9 77 aa18.42■□□□□ 0.54
KRT8-209ENST00000547176 SLC4A9Q96Q91 983 aa18.42■□□□□ 0.54
KRT8-209ENST00000547176 RTCBQ9Y3I0 505 aaKnown RBP18.42■□□□□ 0.54
KRT8-209ENST00000547176 C4BP0C0L5 1744 aa18.42■□□□□ 0.54
KRT8-209ENST00000547176 COL3A1P02461 1466 aaPredicted RBP18.41■□□□□ 0.54
KRT8-209ENST00000547176 TRAPPC3LQ5T215 181 aa18.41■□□□□ 0.54
KRT8-209ENST00000547176 TAF1LQ8IZX4 1826 aa18.41■□□□□ 0.54
KRT8-209ENST00000547176 TUBGCP6Q96RT7 1819 aa18.4■□□□□ 0.54
KRT8-209ENST00000547176 GNAT3A8MTJ3 354 aa18.4■□□□□ 0.54
KRT8-209ENST00000547176 PRKAR2BP31323 418 aa18.4■□□□□ 0.54
KRT8-209ENST00000547176 RC3H1Q5TC82 1133 aaKnown RBP18.4■□□□□ 0.54
KRT8-209ENST00000547176 AMIGO3Q86WK7 504 aa18.4■□□□□ 0.54
KRT8-209ENST00000547176 DDX10Q13206 875 aaKnown RBP18.38■□□□□ 0.53
KRT8-209ENST00000547176 RSPH6AQ9H0K4 717 aa18.38■□□□□ 0.53
KRT8-209ENST00000547176 MAP3K5Q99683 1374 aa18.38■□□□□ 0.53
KRT8-209ENST00000547176 FCHSD2O94868 740 aa18.37■□□□□ 0.53
KRT8-209ENST00000547176 TEFQ10587 303 aa18.37■□□□□ 0.53
KRT8-209ENST00000547176 SLC39A6Q13433 755 aa18.37■□□□□ 0.53
KRT8-209ENST00000547176 PHACTR3Q96KR7 559 aa18.37■□□□□ 0.53
KRT8-209ENST00000547176 RPS6KA4O75676 772 aa18.36■□□□□ 0.53
KRT8-209ENST00000547176 ADRA2BP18089 450 aa18.36■□□□□ 0.53
KRT8-209ENST00000547176 RFC4P35249 363 aa18.36■□□□□ 0.53
KRT8-209ENST00000547176 GPR162Q16538 588 aa18.36■□□□□ 0.53
KRT8-209ENST00000547176 CNTNAP4Q9C0A0 1308 aa18.36■□□□□ 0.53
KRT8-209ENST00000547176 NEFMP07197 916 aa18.35■□□□□ 0.53
KRT8-209ENST00000547176 TTC5Q8N0Z6 440 aa18.35■□□□□ 0.53
KRT8-209ENST00000547176 IL17REQ8NFR9 667 aa18.35■□□□□ 0.53
KRT8-209ENST00000547176 SCN11AQ9UI33 1791 aa18.35■□□□□ 0.53
KRT8-209ENST00000547176 YY1P25490 414 aa18.34■□□□□ 0.53
KRT8-209ENST00000547176 CRKLP46109 303 aaKnown RBP18.34■□□□□ 0.53
KRT8-209ENST00000547176 PELP1Q8IZL8 1130 aaKnown RBP18.34■□□□□ 0.53
KRT8-209ENST00000547176 ARHGEF1Q92888 912 aaKnown RBP18.34■□□□□ 0.53
KRT8-209ENST00000547176 RALBP1Q15311 655 aa18.33■□□□□ 0.52
KRT8-209ENST00000547176 DNAJC10Q8IXB1 793 aa18.33■□□□□ 0.52
KRT8-209ENST00000547176 NLGN1Q8N2Q7 840 aa18.33■□□□□ 0.52
KRT8-209ENST00000547176 RTF1Q92541 710 aaKnown RBP18.33■□□□□ 0.52
KRT8-209ENST00000547176 UBR3Q6ZT12 1888 aa18.33■□□□□ 0.52
KRT8-209ENST00000547176 NLGN2Q8NFZ4 835 aa18.32■□□□□ 0.52
KRT8-209ENST00000547176 CD2APQ9Y5K6 639 aa18.32■□□□□ 0.52
KRT8-209ENST00000547176 ZEB1P37275 1124 aaPredicted RBP18.31■□□□□ 0.52
KRT8-209ENST00000547176 COL24A1Q17RW2 1714 aa18.31■□□□□ 0.52
KRT8-209ENST00000547176 MMP10P09238 476 aa18.3■□□□□ 0.52
KRT8-209ENST00000547176 VSIG10Q8N0Z9 540 aa18.3■□□□□ 0.52
KRT8-209ENST00000547176 PNNQ9H307 717 aaKnown RBP18.3■□□□□ 0.52
KRT8-209ENST00000547176 CCDC87Q9NVE4 849 aa18.3■□□□□ 0.52
KRT8-209ENST00000547176 ZNF831Q5JPB2 1677 aa18.3■□□□□ 0.52
KRT8-209ENST00000547176 MRC1P22897 1456 aa18.29■□□□□ 0.52
KRT8-209ENST00000547176 INTS5Q6P9B9 1019 aaKnown RBP18.29■□□□□ 0.52
KRT8-209ENST00000547176 ZNF790Q6PG37 636 aa18.29■□□□□ 0.52
KRT8-209ENST00000547176 BTBD11A6QL63 1104 aa18.28■□□□□ 0.52
KRT8-209ENST00000547176 STARD3NLO95772 234 aa18.28■□□□□ 0.52
KRT8-209ENST00000547176 CYP19A1P11511 503 aaPredicted RBP18.28■□□□□ 0.52
KRT8-209ENST00000547176 HTATSF1O43719 755 aaKnown RBP18.27■□□□□ 0.52
KRT8-209ENST00000547176 ZPR1O75312 459 aa18.27■□□□□ 0.52
KRT8-209ENST00000547176 GYS1P13807 737 aa18.27■□□□□ 0.52
KRT8-209ENST00000547176 MCM10Q7L590 875 aa18.27■□□□□ 0.52
KRT8-209ENST00000547176 TEX13AQ9BXU3 409 aaPredicted RBP18.27■□□□□ 0.52
KRT8-209ENST00000547176 ZNF496Q96IT1 587 aaPredicted RBP18.26■□□□□ 0.51
KRT8-209ENST00000547176 FMNL2Q96PY5 1086 aa18.26■□□□□ 0.51
KRT8-209ENST00000547176 PARP3Q9Y6F1 533 aa18.26■□□□□ 0.51
KRT8-209ENST00000547176 SRP68Q9UHB9 627 aaKnown RBP18.25■□□□□ 0.51
KRT8-209ENST00000547176 COL5A3P25940 1745 aaPredicted RBP18.25■□□□□ 0.51
KRT8-209ENST00000547176 CEMIPQ8WUJ3 1361 aa18.25■□□□□ 0.51
KRT8-209ENST00000547176 MAPK8IP3Q9UPT6 1336 aa18.24■□□□□ 0.51
KRT8-209ENST00000547176 GRIN3BO60391 1043 aa18.24■□□□□ 0.51
KRT8-209ENST00000547176 CANXP27824 592 aaKnown RBP18.24■□□□□ 0.51
KRT8-209ENST00000547176 DCTN1Q14203 1278 aa18.24■□□□□ 0.51
KRT8-209ENST00000547176 ADAMTS7Q9UKP4 1686 aa18.24■□□□□ 0.51
KRT8-209ENST00000547176 MYH14Q7Z406 1995 aaKnown RBP18.24■□□□□ 0.51
KRT8-209ENST00000547176 VIRMAQ69YN4 1812 aaKnown RBP18.23■□□□□ 0.51
KRT8-209ENST00000547176 NPM2Q86SE8 214 aaKnown RBP18.23■□□□□ 0.51
KRT8-209ENST00000547176 ZBTB1Q9Y2K1 713 aa18.23■□□□□ 0.51
KRT8-209ENST00000547176 KCPQ6ZWJ8 1503 aa18.23■□□□□ 0.51
KRT8-209ENST00000547176 SOS1Q07889 1333 aaPredicted RBP18.23■□□□□ 0.51
KRT8-209ENST00000547176 MYBBP1AQ9BQG0 1328 aaKnown RBP18.23■□□□□ 0.51
KRT8-209ENST00000547176 USP42Q9H9J4 1324 aaKnown RBP18.23■□□□□ 0.51
KRT8-209ENST00000547176 HEG1Q9ULI3 1381 aa18.22■□□□□ 0.51
KRT8-209ENST00000547176 KCNQ3O43525 872 aa18.22■□□□□ 0.51
KRT8-209ENST00000547176 FKBP8Q14318 412 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 191.6 ms