RNA–Protein interactions for RNA: ENST00000547019.1

R3HDM2-210, Transcript of R3H domain containing 2, humanhuman

TSL 3

Gene R3HDM2, Length 595 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM2-210ENST00000547019 PCDH11YQ9BZA8 1340 aa13.91□□□□□ -0.18
R3HDM2-210ENST00000547019 PIGBQ92521 554 aa13.91□□□□□ -0.18
R3HDM2-210ENST00000547019 GNPATO15228 680 aa13.9□□□□□ -0.18
R3HDM2-210ENST00000547019 FCHSD2O94868 740 aa13.9□□□□□ -0.18
R3HDM2-210ENST00000547019 TGFB2P61812 414 aa13.9□□□□□ -0.18
R3HDM2-210ENST00000547019 TMC1Q8TDI8 760 aa13.9□□□□□ -0.18
R3HDM2-210ENST00000547019 RTL1A6NKG5 1358 aa13.9□□□□□ -0.18
R3HDM2-210ENST00000547019 LOC102724428A0A0B4J2F2 783 aa13.89□□□□□ -0.19
R3HDM2-210ENST00000547019 SIK1P57059 783 aa13.89□□□□□ -0.19
R3HDM2-210ENST00000547019 RRS1Q15050 365 aaKnown RBP13.89□□□□□ -0.19
R3HDM2-210ENST00000547019 HDGFL2Q7Z4V5 671 aaPredicted RBP13.89□□□□□ -0.19
R3HDM2-210ENST00000547019 CGNL1Q0VF96 1302 aa13.89□□□□□ -0.19
R3HDM2-210ENST00000547019 ZNF831Q5JPB2 1677 aa13.88□□□□□ -0.19
R3HDM2-210ENST00000547019 AMPHP49418 695 aa13.88□□□□□ -0.19
R3HDM2-210ENST00000547019 KIF20BQ96Q89 1820 aa13.87□□□□□ -0.19
R3HDM2-210ENST00000547019 KDRP35968 1356 aa13.87□□□□□ -0.19
R3HDM2-210ENST00000547019 SMC1BQ8NDV3 1235 aa13.87□□□□□ -0.19
R3HDM2-210ENST00000547019 RAPGEF4Q8WZA2 1011 aa13.87□□□□□ -0.19
R3HDM2-210ENST00000547019 SMARCC1Q92922 1105 aaPredicted RBP13.87□□□□□ -0.19
R3HDM2-210ENST00000547019 RNF181Q9P0P0 153 aa13.87□□□□□ -0.19
R3HDM2-210ENST00000547019 ADAMTS7Q9UKP4 1686 aa13.87□□□□□ -0.19
R3HDM2-210ENST00000547019 DLEC1Q9Y238 1755 aa13.86□□□□□ -0.19
R3HDM2-210ENST00000547019 TATP17735 454 aaPredicted RBP13.86□□□□□ -0.19
R3HDM2-210ENST00000547019 DCAF5Q96JK2 942 aa13.86□□□□□ -0.19
R3HDM2-210ENST00000547019 ASAP1Q9ULH1 1129 aa13.86□□□□□ -0.19
R3HDM2-210ENST00000547019 KDM6AO15550 1401 aaPredicted RBP13.86□□□□□ -0.19
R3HDM2-210ENST00000547019 NCAPD2Q15021 1401 aa13.86□□□□□ -0.19
R3HDM2-210ENST00000547019 KDM2BQ8NHM5 1336 aa13.86□□□□□ -0.19
R3HDM2-210ENST00000547019 ANKRD26Q9UPS8 1709 aa13.85□□□□□ -0.19
R3HDM2-210ENST00000547019 GYS1P13807 737 aa13.84□□□□□ -0.19
R3HDM2-210ENST00000547019 RASSF7Q02833 373 aa13.84□□□□□ -0.19
R3HDM2-210ENST00000547019 COG3Q96JB2 828 aa13.84□□□□□ -0.19
R3HDM2-210ENST00000547019 SLC4A9Q96Q91 983 aa13.84□□□□□ -0.19
R3HDM2-210ENST00000547019 TIMELESSQ9UNS1 1208 aa13.84□□□□□ -0.19
R3HDM2-210ENST00000547019 AFDNP55196 1824 aaKnown RBP13.84□□□□□ -0.19
R3HDM2-210ENST00000547019 SMG6Q86US8 1419 aaKnown RBP13.83□□□□□ -0.2
R3HDM2-210ENST00000547019 TERF2IPQ9NYB0 399 aa13.83□□□□□ -0.2
R3HDM2-210ENST00000547019 VIRMAQ69YN4 1812 aaKnown RBP13.83□□□□□ -0.2
R3HDM2-210ENST00000547019 FOXN1O15353 648 aa13.82□□□□□ -0.2
R3HDM2-210ENST00000547019 ATP6V1AP38606 617 aa13.82□□□□□ -0.2
R3HDM2-210ENST00000547019 TMF1P82094 1093 aa13.82□□□□□ -0.2
R3HDM2-210ENST00000547019 NKX1-1Q15270 411 aaPredicted RBP13.82□□□□□ -0.2
R3HDM2-210ENST00000547019 HSP90AB2PQ58FF8 381 aa13.82□□□□□ -0.2
R3HDM2-210ENST00000547019 CARD11Q9BXL7 1154 aa13.82□□□□□ -0.2
R3HDM2-210ENST00000547019 INSRP06213 1382 aa13.82□□□□□ -0.2
R3HDM2-210ENST00000547019 TJP1Q07157 1748 aa13.81□□□□□ -0.2
R3HDM2-210ENST00000547019 HMGB2P26583 209 aaKnown RBP13.81□□□□□ -0.2
R3HDM2-210ENST00000547019 CHRNA5P30532 468 aa13.81□□□□□ -0.2
R3HDM2-210ENST00000547019 ARHGEF1Q92888 912 aaKnown RBP13.81□□□□□ -0.2
R3HDM2-210ENST00000547019 CCDC87Q9NVE4 849 aa13.81□□□□□ -0.2
R3HDM2-210ENST00000547019 DICER1Q9UPY3 1922 aaKnown RBP13.8□□□□□ -0.2
R3HDM2-210ENST00000547019 NLGN1Q8N2Q7 840 aa13.8□□□□□ -0.2
R3HDM2-210ENST00000547019 ATG3Q9NT62 314 aa13.8□□□□□ -0.2
R3HDM2-210ENST00000547019 NRXN2Q9P2S2 1712 aa13.8□□□□□ -0.2
R3HDM2-210ENST00000547019 POTECB2RU33 542 aa13.79□□□□□ -0.2
R3HDM2-210ENST00000547019 DDR1Q08345 913 aa13.79□□□□□ -0.2
R3HDM2-210ENST00000547019 FAM161AQ3B820 660 aa13.79□□□□□ -0.2
R3HDM2-210ENST00000547019 PIM2Q9P1W9 311 aa13.79□□□□□ -0.2
R3HDM2-210ENST00000547019 DALRD3Q5D0E6 543 aaKnown RBP13.78□□□□□ -0.2
R3HDM2-210ENST00000547019 TRAPPC3LQ5T215 181 aa13.78□□□□□ -0.2
R3HDM2-210ENST00000547019 GGNBP2Q9H3C7 697 aa13.78□□□□□ -0.2
R3HDM2-210ENST00000547019 TMOD3Q9NYL9 352 aa13.78□□□□□ -0.2
R3HDM2-210ENST00000547019 RTCBQ9Y3I0 505 aaKnown RBP13.78□□□□□ -0.2
R3HDM2-210ENST00000547019 FLT4P35916 1363 aa13.78□□□□□ -0.2
R3HDM2-210ENST00000547019 SRP68Q9UHB9 627 aaKnown RBP13.77□□□□□ -0.21
R3HDM2-210ENST00000547019 MKRN1Q9UHC7 482 aaKnown RBP13.77□□□□□ -0.21
R3HDM2-210ENST00000547019 PARP3Q9Y6F1 533 aa13.77□□□□□ -0.21
R3HDM2-210ENST00000547019 CNTNAP4Q9C0A0 1308 aa13.76□□□□□ -0.21
R3HDM2-210ENST00000547019 GLTPD2A6NH11 291 aa13.76□□□□□ -0.21
R3HDM2-210ENST00000547019 FYB1O15117 783 aa13.76□□□□□ -0.21
R3HDM2-210ENST00000547019 FER1L6Q2WGJ9 1857 aa13.76□□□□□ -0.21
R3HDM2-210ENST00000547019 VEGFAP15692 232 aaPredicted RBP13.75□□□□□ -0.21
R3HDM2-210ENST00000547019 TNRC18O15417 2968 aaPredicted RBP13.74□□□□□ -0.21
R3HDM2-210ENST00000547019 ANKRD31Q8N7Z5 1873 aa13.74□□□□□ -0.21
R3HDM2-210ENST00000547019 ZC3H4Q9UPT8 1303 aaKnown RBP13.74□□□□□ -0.21
R3HDM2-210ENST00000547019 COL11A2P13942 1736 aaPredicted RBP13.74□□□□□ -0.21
R3HDM2-210ENST00000547019 POTEIP0CG38 1075 aa13.74□□□□□ -0.21
R3HDM2-210ENST00000547019 POTEJP0CG39 1038 aa13.74□□□□□ -0.21
R3HDM2-210ENST00000547019 ADRA2BP18089 450 aa13.74□□□□□ -0.21
R3HDM2-210ENST00000547019 FKBP8Q14318 412 aa13.74□□□□□ -0.21
R3HDM2-210ENST00000547019 EMILIN1Q9Y6C2 1016 aa13.74□□□□□ -0.21
R3HDM2-210ENST00000547019 CACNA1SQ13698 1873 aa13.74□□□□□ -0.21
R3HDM2-210ENST00000547019 CNTNAP1P78357 1384 aa13.73□□□□□ -0.21
R3HDM2-210ENST00000547019 RPS6KA4O75676 772 aa13.73□□□□□ -0.21
R3HDM2-210ENST00000547019 PHKG2P15735 406 aa13.73□□□□□ -0.21
R3HDM2-210ENST00000547019 RFC4P35249 363 aa13.73□□□□□ -0.21
R3HDM2-210ENST00000547019 PUS7Q96PZ0 661 aaKnown RBP13.73□□□□□ -0.21
R3HDM2-210ENST00000547019 TESK2Q96S53 571 aa13.73□□□□□ -0.21
R3HDM2-210ENST00000547019 PRDM10Q9NQV6 1147 aa13.73□□□□□ -0.21
R3HDM2-210ENST00000547019 USP42Q9H9J4 1324 aaKnown RBP13.72□□□□□ -0.21
R3HDM2-210ENST00000547019 POLRMTO00411 1230 aaKnown RBP13.72□□□□□ -0.21
R3HDM2-210ENST00000547019 RC3H1Q5TC82 1133 aaKnown RBP13.72□□□□□ -0.21
R3HDM2-210ENST00000547019 CREBZFQ9NS37 354 aa13.72□□□□□ -0.21
R3HDM2-210ENST00000547019 KIF24Q5T7B8 1368 aa13.71□□□□□ -0.21
R3HDM2-210ENST00000547019 NFKBIEO00221 500 aa13.71□□□□□ -0.21
R3HDM2-210ENST00000547019 LMNB1P20700 586 aa13.71□□□□□ -0.21
R3HDM2-210ENST00000547019 RBM42Q9BTD8 480 aaKnown RBP13.71□□□□□ -0.21
R3HDM2-210ENST00000547019 SPG7Q9UQ90 795 aa13.71□□□□□ -0.21
R3HDM2-210ENST00000547019 ABHD8Q96I13 439 aa13.7□□□□□ -0.22
R3HDM2-210ENST00000547019 PCDH10Q9P2E7 1040 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms