RNA–Protein interactions for RNA: ENST00000546652.6

PCBP2-208, Transcript of poly(rC) binding protein 2, humanhuman

TSL 5

Gene PCBP2, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCBP2-208ENST00000546652 LINC00116Q8NCU8 138 aa15.49■□□□□ 0.07
PCBP2-208ENST00000546652 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.48■□□□□ 0.07
PCBP2-208ENST00000546652 GNPATO15228 680 aa15.48■□□□□ 0.07
PCBP2-208ENST00000546652 ITPK1Q13572 414 aa15.48■□□□□ 0.07
PCBP2-208ENST00000546652 ITGB4P16144 1822 aa15.47■□□□□ 0.07
PCBP2-208ENST00000546652 U2SURPO15042 1029 aaKnown RBP15.47■□□□□ 0.07
PCBP2-208ENST00000546652 NFATC2IPQ8NCF5 419 aa15.47■□□□□ 0.07
PCBP2-208ENST00000546652 PTCD1O75127 700 aaKnown RBP15.46■□□□□ 0.07
PCBP2-208ENST00000546652 AMIGO3Q86WK7 504 aa15.46■□□□□ 0.07
PCBP2-208ENST00000546652 C5P01031 1676 aa15.46■□□□□ 0.07
PCBP2-208ENST00000546652 SSFA2P28290 1259 aa15.45■□□□□ 0.06
PCBP2-208ENST00000546652 NLGN2Q8NFZ4 835 aa15.45■□□□□ 0.06
PCBP2-208ENST00000546652 KDRP35968 1356 aa15.45■□□□□ 0.06
PCBP2-208ENST00000546652 MAP3K5Q99683 1374 aa15.45■□□□□ 0.06
PCBP2-208ENST00000546652 QSER1Q2KHR3 1735 aa15.45■□□□□ 0.06
PCBP2-208ENST00000546652 KDM6AO15550 1401 aaPredicted RBP15.44■□□□□ 0.06
PCBP2-208ENST00000546652 AKAP4Q5JQC9 854 aa15.44■□□□□ 0.06
PCBP2-208ENST00000546652 RTCBQ9Y3I0 505 aaKnown RBP15.44■□□□□ 0.06
PCBP2-208ENST00000546652 TUBGCP6Q96RT7 1819 aa15.44■□□□□ 0.06
PCBP2-208ENST00000546652 C4BP0C0L5 1744 aa15.43■□□□□ 0.06
PCBP2-208ENST00000546652 TRAPPC3LQ5T215 181 aa15.43■□□□□ 0.06
PCBP2-208ENST00000546652 NPC1L1Q9UHC9 1359 aa15.42■□□□□ 0.06
PCBP2-208ENST00000546652 CFAP53Q96M91 514 aa15.42■□□□□ 0.06
PCBP2-208ENST00000546652 SLC4A9Q96Q91 983 aa15.42■□□□□ 0.06
PCBP2-208ENST00000546652 LGR6Q9HBX8 967 aa15.42■□□□□ 0.06
PCBP2-208ENST00000546652 MTHFSDQ2M296 383 aaKnown RBP15.41■□□□□ 0.06
PCBP2-208ENST00000546652 RNMTO43148 476 aaKnown RBP15.4■□□□□ 0.06
PCBP2-208ENST00000546652 SLC52A2Q9HAB3 445 aa15.4■□□□□ 0.06
PCBP2-208ENST00000546652 TAF1LQ8IZX4 1826 aa15.4■□□□□ 0.06
PCBP2-208ENST00000546652 RFC4P35249 363 aa15.39■□□□□ 0.05
PCBP2-208ENST00000546652 RC3H1Q5TC82 1133 aaKnown RBP15.39■□□□□ 0.05
PCBP2-208ENST00000546652 CD2APQ9Y5K6 639 aa15.39■□□□□ 0.05
PCBP2-208ENST00000546652 RPS6KA4O75676 772 aa15.38■□□□□ 0.05
PCBP2-208ENST00000546652 ARHGEF1Q92888 912 aaKnown RBP15.38■□□□□ 0.05
PCBP2-208ENST00000546652 NUDCQ9Y266 331 aa15.38■□□□□ 0.05
PCBP2-208ENST00000546652 MMP10P09238 476 aa15.37■□□□□ 0.05
PCBP2-208ENST00000546652 CRKLP46109 303 aaKnown RBP15.37■□□□□ 0.05
PCBP2-208ENST00000546652 SLC39A6Q13433 755 aa15.37■□□□□ 0.05
PCBP2-208ENST00000546652 WWC3Q9ULE0 1092 aa15.37■□□□□ 0.05
PCBP2-208ENST00000546652 CNTNAP4Q9C0A0 1308 aa15.37■□□□□ 0.05
PCBP2-208ENST00000546652 ADRA2BP18089 450 aa15.36■□□□□ 0.05
PCBP2-208ENST00000546652 NLGN1Q8N2Q7 840 aa15.36■□□□□ 0.05
PCBP2-208ENST00000546652 GRIN3BO60391 1043 aa15.35■□□□□ 0.05
PCBP2-208ENST00000546652 U2AF1L5P0DN76 240 aaPredicted RBP15.35■□□□□ 0.05
PCBP2-208ENST00000546652 YBX3P16989 372 aaKnown RBP eCLIP15.35■□□□□ 0.051e-24■□□□□ 11
PCBP2-208ENST00000546652 PPP2R1AP30153 589 aa15.35■□□□□ 0.05
PCBP2-208ENST00000546652 U2AF1Q01081 240 aaKnown RBP eCLIP15.35■□□□□ 0.05
PCBP2-208ENST00000546652 TEFQ10587 303 aa15.35■□□□□ 0.05
PCBP2-208ENST00000546652 DNAJC10Q8IXB1 793 aa15.35■□□□□ 0.05
PCBP2-208ENST00000546652 GAS2L2Q8NHY3 880 aa15.35■□□□□ 0.05
PCBP2-208ENST00000546652 COL24A1Q17RW2 1714 aa15.34■□□□□ 0.05
PCBP2-208ENST00000546652 UBR3Q6ZT12 1888 aa15.34■□□□□ 0.05
PCBP2-208ENST00000546652 GNAT3A8MTJ3 354 aa15.34■□□□□ 0.05
PCBP2-208ENST00000546652 PRKAR2BP31323 418 aa15.34■□□□□ 0.05
PCBP2-208ENST00000546652 TTC5Q8N0Z6 440 aa15.34■□□□□ 0.05
PCBP2-208ENST00000546652 ZNF784Q8NCA9 323 aaPredicted RBP15.34■□□□□ 0.05
PCBP2-208ENST00000546652 COL3A1P02461 1466 aaPredicted RBP15.33■□□□□ 0.04
PCBP2-208ENST00000546652 GYS1P13807 737 aa15.32■□□□□ 0.04
PCBP2-208ENST00000546652 CCDC87Q9NVE4 849 aa15.32■□□□□ 0.04
PCBP2-208ENST00000546652 PARP3Q9Y6F1 533 aa15.32■□□□□ 0.04
PCBP2-208ENST00000546652 INTS5Q6P9B9 1019 aaKnown RBP15.31■□□□□ 0.04
PCBP2-208ENST00000546652 IL17REQ8NFR9 667 aa15.31■□□□□ 0.04
PCBP2-208ENST00000546652 PHACTR3Q96KR7 559 aa15.31■□□□□ 0.04
PCBP2-208ENST00000546652 SRP68Q9UHB9 627 aaKnown RBP15.31■□□□□ 0.04
PCBP2-208ENST00000546652 ZPR1O75312 459 aa15.3■□□□□ 0.04
PCBP2-208ENST00000546652 RSPH6AQ9H0K4 717 aa15.3■□□□□ 0.04
PCBP2-208ENST00000546652 SCN11AQ9UI33 1791 aa15.29■□□□□ 0.04
PCBP2-208ENST00000546652 CYP19A1P11511 503 aaPredicted RBP15.29■□□□□ 0.04
PCBP2-208ENST00000546652 RTF1Q92541 710 aaKnown RBP15.29■□□□□ 0.04
PCBP2-208ENST00000546652 UTRNP46939 3433 aa15.28■□□□□ 0.04
PCBP2-208ENST00000546652 NEFMP07197 916 aa15.28■□□□□ 0.04
PCBP2-208ENST00000546652 CANXP27824 592 aaKnown RBP15.28■□□□□ 0.04
PCBP2-208ENST00000546652 FKBP8Q14318 412 aa15.28■□□□□ 0.04
PCBP2-208ENST00000546652 ZNF831Q5JPB2 1677 aa15.28■□□□□ 0.04
PCBP2-208ENST00000546652 USP42Q9H9J4 1324 aaKnown RBP15.27■□□□□ 0.04
PCBP2-208ENST00000546652 A0A0G2JLW4 131 aa15.27■□□□□ 0.04
PCBP2-208ENST00000546652 FCHSD2O94868 740 aa15.27■□□□□ 0.04
PCBP2-208ENST00000546652 STARD3NLO95772 234 aa15.27■□□□□ 0.04
PCBP2-208ENST00000546652 USPL1Q5W0Q7 1092 aa15.27■□□□□ 0.04
PCBP2-208ENST00000546652 ZNF790Q6PG37 636 aa15.27■□□□□ 0.04
PCBP2-208ENST00000546652 VSIG10Q8N0Z9 540 aa15.27■□□□□ 0.04
PCBP2-208ENST00000546652 ZBTB1Q9Y2K1 713 aa15.27■□□□□ 0.04
PCBP2-208ENST00000546652 ZNF330Q9Y3S2 320 aaPredicted RBP15.27■□□□□ 0.04
PCBP2-208ENST00000546652 MRC1P22897 1456 aa15.27■□□□□ 0.03
PCBP2-208ENST00000546652 BTBD11A6QL63 1104 aa15.26■□□□□ 0.03
PCBP2-208ENST00000546652 TGFB2P61812 414 aa15.26■□□□□ 0.03
PCBP2-208ENST00000546652 ZNF496Q96IT1 587 aaPredicted RBP15.26■□□□□ 0.03
PCBP2-208ENST00000546652 COL5A3P25940 1745 aaPredicted RBP15.26■□□□□ 0.03
PCBP2-208ENST00000546652 SOS1Q07889 1333 aaPredicted RBP15.25■□□□□ 0.03
PCBP2-208ENST00000546652 MCM10Q7L590 875 aa15.25■□□□□ 0.03
PCBP2-208ENST00000546652 NPM2Q86SE8 214 aaKnown RBP15.25■□□□□ 0.03
PCBP2-208ENST00000546652 BCS1LQ9Y276 419 aa15.25■□□□□ 0.03
PCBP2-208ENST00000546652 CICQ96RK0 1608 aaPredicted RBP15.25■□□□□ 0.03
PCBP2-208ENST00000546652 FMNL2Q96PY5 1086 aa15.24■□□□□ 0.03
PCBP2-208ENST00000546652 TEX13AQ9BXU3 409 aaPredicted RBP15.24■□□□□ 0.03
PCBP2-208ENST00000546652 MYH14Q7Z406 1995 aaKnown RBP15.24■□□□□ 0.03
PCBP2-208ENST00000546652 TJP1Q07157 1748 aa15.23■□□□□ 0.03
PCBP2-208ENST00000546652 KCPQ6ZWJ8 1503 aa15.23■□□□□ 0.03
PCBP2-208ENST00000546652 DPEP1P16444 411 aa15.23■□□□□ 0.03
PCBP2-208ENST00000546652 DDR1Q08345 913 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms