RNA–Protein interactions for RNA: ENST00000546417.5

BRF1-207, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 3

Gene BRF1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-207ENST00000546417 BRCA1P38398 1863 aaKnown RBP16.93■□□□□ 0.3
BRF1-207ENST00000546417 ATP6V1AP38606 617 aa16.93■□□□□ 0.3
BRF1-207ENST00000546417 TMF1P82094 1093 aa16.93■□□□□ 0.3
BRF1-207ENST00000546417 NKX1-1Q15270 411 aaPredicted RBP16.93■□□□□ 0.3
BRF1-207ENST00000546417 CCDC87Q9NVE4 849 aa16.93■□□□□ 0.3
BRF1-207ENST00000546417 C10orf71Q711Q0 1435 aa16.93■□□□□ 0.3
BRF1-207ENST00000546417 ARFGEF1Q9Y6D6 1849 aa16.92■□□□□ 0.3
BRF1-207ENST00000546417 DPEP1P16444 411 aa16.92■□□□□ 0.3
BRF1-207ENST00000546417 PKD1L3Q7Z443 1732 aa16.92■□□□□ 0.3
BRF1-207ENST00000546417 PCNTO95613 3336 aa16.91■□□□□ 0.3
BRF1-207ENST00000546417 ITPK1Q13572 414 aa16.91■□□□□ 0.3
BRF1-207ENST00000546417 HSP90AB2PQ58FF8 381 aa16.91■□□□□ 0.3
BRF1-207ENST00000546417 TRAPPC3LQ5T215 181 aa16.91■□□□□ 0.3
BRF1-207ENST00000546417 TMOD3Q9NYL9 352 aa16.91■□□□□ 0.3
BRF1-207ENST00000546417 RTCBQ9Y3I0 505 aaKnown RBP16.91■□□□□ 0.3
BRF1-207ENST00000546417 KCPQ6ZWJ8 1503 aa16.91■□□□□ 0.3
BRF1-207ENST00000546417 SMC1BQ8NDV3 1235 aa16.9■□□□□ 0.3
BRF1-207ENST00000546417 RRAGCQ9HB90 399 aa16.9■□□□□ 0.3
BRF1-207ENST00000546417 ASAP1Q9ULH1 1129 aa16.9■□□□□ 0.3
BRF1-207ENST00000546417 SPG7Q9UQ90 795 aa16.9■□□□□ 0.3
BRF1-207ENST00000546417 TNRC6CQ9HCJ0 1690 aaKnown RBP16.9■□□□□ 0.3
BRF1-207ENST00000546417 FLT4P35916 1363 aa16.89■□□□□ 0.3
BRF1-207ENST00000546417 KIF24Q5T7B8 1368 aa16.89■□□□□ 0.3
BRF1-207ENST00000546417 FYB1O15117 783 aa16.89■□□□□ 0.29
BRF1-207ENST00000546417 PIM2Q9P1W9 311 aa16.89■□□□□ 0.29
BRF1-207ENST00000546417 PARP3Q9Y6F1 533 aa16.89■□□□□ 0.29
BRF1-207ENST00000546417 C4AP0C0L4 1744 aa16.88■□□□□ 0.29
BRF1-207ENST00000546417 SLC24A1O60721 1099 aa16.88■□□□□ 0.29
BRF1-207ENST00000546417 ADRA2BP18089 450 aa16.88■□□□□ 0.29
BRF1-207ENST00000546417 KCNA3P22001 575 aa16.88■□□□□ 0.29
BRF1-207ENST00000546417 GGNBP2Q9H3C7 697 aa16.88■□□□□ 0.29
BRF1-207ENST00000546417 RNF181Q9P0P0 153 aa16.88■□□□□ 0.29
BRF1-207ENST00000546417 HSPA1AP0DMV8 641 aaKnown RBP16.87■□□□□ 0.29
BRF1-207ENST00000546417 HSPA1BP0DMV9 641 aaKnown RBP16.87■□□□□ 0.29
BRF1-207ENST00000546417 ARHGEF1Q92888 912 aaKnown RBP16.86■□□□□ 0.29
BRF1-207ENST00000546417 DCAF5Q96JK2 942 aa16.86■□□□□ 0.29
BRF1-207ENST00000546417 SBF1O95248 1867 aa16.85■□□□□ 0.29
BRF1-207ENST00000546417 GYS1P13807 737 aa16.85■□□□□ 0.29
BRF1-207ENST00000546417 RFC4P35249 363 aa16.85■□□□□ 0.29
BRF1-207ENST00000546417 DALRD3Q5D0E6 543 aaKnown RBP16.85■□□□□ 0.29
BRF1-207ENST00000546417 RC3H1Q5TC82 1133 aaKnown RBP16.85■□□□□ 0.29
BRF1-207ENST00000546417 ATG3Q9NT62 314 aa16.85■□□□□ 0.29
BRF1-207ENST00000546417 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.85■□□□□ 0.29
BRF1-207ENST00000546417 ZNF831Q5JPB2 1677 aa16.84■□□□□ 0.29
BRF1-207ENST00000546417 IFNL2Q8IZJ0 200 aa16.83■□□□□ 0.28
BRF1-207ENST00000546417 TESK2Q96S53 571 aa16.83■□□□□ 0.28
BRF1-207ENST00000546417 NCAPD2Q15021 1401 aa16.82■□□□□ 0.28
BRF1-207ENST00000546417 ZC3H4Q9UPT8 1303 aaKnown RBP16.82■□□□□ 0.28
BRF1-207ENST00000546417 RPS6KA4O75676 772 aa16.82■□□□□ 0.28
BRF1-207ENST00000546417 KDRP35968 1356 aa16.81■□□□□ 0.28
BRF1-207ENST00000546417 CNTNAP4Q9C0A0 1308 aa16.81■□□□□ 0.28
BRF1-207ENST00000546417 VEGFAP15692 232 aaPredicted RBP16.81■□□□□ 0.28
BRF1-207ENST00000546417 PHKG2P15735 406 aa16.81■□□□□ 0.28
BRF1-207ENST00000546417 TONSLQ96HA7 1378 aa16.8■□□□□ 0.28
BRF1-207ENST00000546417 KIF20BQ96Q89 1820 aa16.8■□□□□ 0.28
BRF1-207ENST00000546417 ST20-MTHFSA0A0A6YYL1 179 aa16.8■□□□□ 0.28
BRF1-207ENST00000546417 RBM42Q9BTD8 480 aaKnown RBP16.8■□□□□ 0.28
BRF1-207ENST00000546417 COL5A3P25940 1745 aaPredicted RBP16.79■□□□□ 0.28
BRF1-207ENST00000546417 SLC4A9Q96Q91 983 aa16.79■□□□□ 0.28
BRF1-207ENST00000546417 GLTPD2A6NH11 291 aa16.78■□□□□ 0.28
BRF1-207ENST00000546417 EMILIN1Q9Y6C2 1016 aa16.78■□□□□ 0.28
BRF1-207ENST00000546417 PPM1GO15355 546 aaPredicted RBP16.77■□□□□ 0.28
BRF1-207ENST00000546417 MYH14Q7Z406 1995 aaKnown RBP16.77■□□□□ 0.27
BRF1-207ENST00000546417 ERVV-2B6SEH9 535 aa16.76■□□□□ 0.27
BRF1-207ENST00000546417 CHRNA5P30532 468 aa16.76■□□□□ 0.27
BRF1-207ENST00000546417 EYA1Q99502 592 aa16.76■□□□□ 0.27
BRF1-207ENST00000546417 LMNB1P20700 586 aa16.75■□□□□ 0.27
BRF1-207ENST00000546417 WASHC2AQ641Q2 1341 aa16.74■□□□□ 0.27
BRF1-207ENST00000546417 KDM6AO15550 1401 aaPredicted RBP16.74■□□□□ 0.27
BRF1-207ENST00000546417 SLC34A2O95436 690 aa16.74■□□□□ 0.27
BRF1-207ENST00000546417 DDR1Q08345 913 aa16.74■□□□□ 0.27
BRF1-207ENST00000546417 FKBP8Q14318 412 aa16.74■□□□□ 0.27
BRF1-207ENST00000546417 USP42Q9H9J4 1324 aaKnown RBP16.73■□□□□ 0.27
BRF1-207ENST00000546417 HSP90AB1P08238 724 aaKnown RBP16.73■□□□□ 0.27
BRF1-207ENST00000546417 RASSF7Q02833 373 aa16.73■□□□□ 0.27
BRF1-207ENST00000546417 ANKRD26Q9UPS8 1709 aa16.73■□□□□ 0.27
BRF1-207ENST00000546417 SRP68Q9UHB9 627 aaKnown RBP16.72■□□□□ 0.27
BRF1-207ENST00000546417 CCDC88AQ3V6T2 1871 aa16.71■□□□□ 0.27
BRF1-207ENST00000546417 CRKLP46109 303 aaKnown RBP16.71■□□□□ 0.27
BRF1-207ENST00000546417 POLRMTO00411 1230 aaKnown RBP16.7■□□□□ 0.26
BRF1-207ENST00000546417 TM4SF1P30408 202 aa16.7■□□□□ 0.26
BRF1-207ENST00000546417 CABP4P57796 275 aa16.7■□□□□ 0.26
BRF1-207ENST00000546417 DPY19L2Q6NUT2 758 aa16.7■□□□□ 0.26
BRF1-207ENST00000546417 CREBZFQ9NS37 354 aa16.7■□□□□ 0.26
BRF1-207ENST00000546417 TIAM2Q8IVF5 1701 aa16.7■□□□□ 0.26
BRF1-207ENST00000546417 CDCA8Q53HL2 280 aa16.69■□□□□ 0.26
BRF1-207ENST00000546417 PRDM10Q9NQV6 1147 aa16.69■□□□□ 0.26
BRF1-207ENST00000546417 PTCD1O75127 700 aaKnown RBP16.68■□□□□ 0.26
BRF1-207ENST00000546417 ZPR1O75312 459 aa16.68■□□□□ 0.26
BRF1-207ENST00000546417 TTLL6Q8N841 843 aa16.67■□□□□ 0.26
BRF1-207ENST00000546417 CARD14Q9BXL6 1004 aa16.67■□□□□ 0.26
BRF1-207ENST00000546417 MKRN1Q9UHC7 482 aaKnown RBP16.67■□□□□ 0.26
BRF1-207ENST00000546417 POTECB2RU33 542 aa16.66■□□□□ 0.26
BRF1-207ENST00000546417 FOXN1O15353 648 aa16.66■□□□□ 0.26
BRF1-207ENST00000546417 PLEKHO1Q53GL0 409 aaPredicted RBP16.66■□□□□ 0.26
BRF1-207ENST00000546417 DLEC1Q9Y238 1755 aa16.66■□□□□ 0.26
BRF1-207ENST00000546417 POLKQ9UBT6 870 aa16.65■□□□□ 0.26
BRF1-207ENST00000546417 AFDNP55196 1824 aaKnown RBP16.65■□□□□ 0.26
BRF1-207ENST00000546417 EIF4A2Q14240 407 aaKnown RBP16.64■□□□□ 0.25
BRF1-207ENST00000546417 USPL1Q5W0Q7 1092 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 98.3 ms