RNA–Protein interactions for RNA: ENST00000546026.1

CIT-218, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 3

Gene CIT, Length 677 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-218ENST00000546026 EIF4A1P60842 406 aaKnown RBP13□□□□□ -0.33
CIT-218ENST00000546026 KRT24Q2M2I5 525 aa13□□□□□ -0.33
CIT-218ENST00000546026 B4GALNT3Q6L9W6 998 aa13□□□□□ -0.33
CIT-218ENST00000546026 NUTM2AQ8IVF1 878 aaPredicted RBP13□□□□□ -0.33
CIT-218ENST00000546026 PELP1Q8IZL8 1130 aaKnown RBP13□□□□□ -0.33
CIT-218ENST00000546026 SLC52A2Q9HAB3 445 aa13□□□□□ -0.33
CIT-218ENST00000546026 SIPA1L3O60292 1781 aaPredicted RBP12.99□□□□□ -0.33
CIT-218ENST00000546026 NWD2Q9ULI1 1742 aa12.99□□□□□ -0.33
CIT-218ENST00000546026 KDM6AO15550 1401 aaPredicted RBP12.99□□□□□ -0.33
CIT-218ENST00000546026 FTSJ3Q8IY81 847 aaKnown RBP12.99□□□□□ -0.33
CIT-218ENST00000546026 PANK1Q8TE04 598 aa12.99□□□□□ -0.33
CIT-218ENST00000546026 CDCA7Q9BWT1 371 aaPredicted RBP12.99□□□□□ -0.33
CIT-218ENST00000546026 THRAP3Q9Y2W1 955 aaKnown RBP12.99□□□□□ -0.33
CIT-218ENST00000546026 SLIT2O94813 1529 aa12.98□□□□□ -0.33
CIT-218ENST00000546026 DISP2A7MBM2 1401 aa12.98□□□□□ -0.33
CIT-218ENST00000546026 ERVV-2B6SEH9 535 aa12.98□□□□□ -0.33
CIT-218ENST00000546026 TRIM27P14373 513 aa12.98□□□□□ -0.33
CIT-218ENST00000546026 CCDC30Q5VVM6 783 aa12.98□□□□□ -0.33
CIT-218ENST00000546026 API5Q9BZZ5 524 aaKnown RBP12.98□□□□□ -0.33
CIT-218ENST00000546026 COG6Q9Y2V7 657 aa12.98□□□□□ -0.33
CIT-218ENST00000546026 NRAPQ86VF7 1730 aa12.98□□□□□ -0.33
CIT-218ENST00000546026 MRC1P22897 1456 aa12.97□□□□□ -0.33
CIT-218ENST00000546026 HEG1Q9ULI3 1381 aa12.97□□□□□ -0.33
CIT-218ENST00000546026 RLBP1P12271 317 aa12.97□□□□□ -0.33
CIT-218ENST00000546026 MVPQ14764 893 aaKnown RBP12.97□□□□□ -0.33
CIT-218ENST00000546026 TNNQ9UQP3 1299 aa12.97□□□□□ -0.33
CIT-218ENST00000546026 PTPRCP08575 1304 aa12.96□□□□□ -0.33
CIT-218ENST00000546026 SPATA31A1Q5TZJ5 1347 aa12.96□□□□□ -0.33
CIT-218ENST00000546026 CABP4P57796 275 aa12.96□□□□□ -0.33
CIT-218ENST00000546026 CLUAP1Q96AJ1 413 aa12.96□□□□□ -0.33
CIT-218ENST00000546026 STK31Q9BXU1 1019 aa12.96□□□□□ -0.33
CIT-218ENST00000546026 CHMP4BQ9H444 224 aaKnown RBP12.96□□□□□ -0.33
CIT-218ENST00000546026 DDX19BQ9UMR2 479 aa12.96□□□□□ -0.33
CIT-218ENST00000546026 SPATA31A5Q5VU36 1347 aa12.95□□□□□ -0.34
CIT-218ENST00000546026 SPATA31A7Q8IWB4 1347 aa12.95□□□□□ -0.34
CIT-218ENST00000546026 EXOC5O00471 708 aa12.95□□□□□ -0.34
CIT-218ENST00000546026 TCERG1O14776 1098 aaKnown RBP12.95□□□□□ -0.34
CIT-218ENST00000546026 KCNQ3O43525 872 aa12.95□□□□□ -0.34
CIT-218ENST00000546026 SLC4A2P04920 1241 aa12.95□□□□□ -0.34
CIT-218ENST00000546026 UNC5CLQ8IV45 518 aa12.95□□□□□ -0.34
CIT-218ENST00000546026 NFATC2IPQ8NCF5 419 aa12.95□□□□□ -0.34
CIT-218ENST00000546026 USP35Q9P2H5 1018 aa12.95□□□□□ -0.34
CIT-218ENST00000546026 SHANK3Q9BYB0 1731 aa12.95□□□□□ -0.34
CIT-218ENST00000546026 CACNA1FO60840 1977 aa12.94□□□□□ -0.34
CIT-218ENST00000546026 HSPA1LP34931 641 aa12.94□□□□□ -0.34
CIT-218ENST00000546026 ZNF790Q6PG37 636 aa12.94□□□□□ -0.34
CIT-218ENST00000546026 BARGINQ6ZT62 677 aa12.94□□□□□ -0.34
CIT-218ENST00000546026 FNBP4Q8N3X1 1017 aaPredicted RBP12.94□□□□□ -0.34
CIT-218ENST00000546026 DDX54Q8TDD1 881 aaKnown RBP12.94□□□□□ -0.34
CIT-218ENST00000546026 NGLY1Q96IV0 654 aa12.94□□□□□ -0.34
CIT-218ENST00000546026 ABCC4O15439 1325 aa12.93□□□□□ -0.34
CIT-218ENST00000546026 WNK3Q9BYP7 1800 aa12.93□□□□□ -0.34
CIT-218ENST00000546026 GIGYF1O75420 1035 aaPredicted RBP12.93□□□□□ -0.34
CIT-218ENST00000546026 HDGFL1Q5TGJ6 251 aa12.93□□□□□ -0.34
CIT-218ENST00000546026 TMEM57Q8N5G2 664 aa12.93□□□□□ -0.34
CIT-218ENST00000546026 VPS72Q15906 364 aa12.92□□□□□ -0.34
CIT-218ENST00000546026 ITPRIPQ8IWB1 547 aa12.92□□□□□ -0.34
CIT-218ENST00000546026 TTC5Q8N0Z6 440 aa12.92□□□□□ -0.34
CIT-218ENST00000546026 INTS3Q68E01 1043 aaKnown RBP12.91□□□□□ -0.34
CIT-218ENST00000546026 FMNL2Q96PY5 1086 aa12.91□□□□□ -0.34
CIT-218ENST00000546026 BCL9LQ86UU0 1499 aa12.91□□□□□ -0.34
CIT-218ENST00000546026 TNS2Q63HR2 1409 aa12.9□□□□□ -0.34
CIT-218ENST00000546026 SLC39A6Q13433 755 aa12.9□□□□□ -0.34
CIT-218ENST00000546026 CENPQQ7L2Z9 268 aaPredicted RBP12.9□□□□□ -0.34
CIT-218ENST00000546026 G2E3Q7L622 706 aa12.9□□□□□ -0.34
CIT-218ENST00000546026 C8orf37Q96NL8 207 aa12.9□□□□□ -0.34
CIT-218ENST00000546026 DBF4Q9UBU7 674 aaPredicted RBP12.9□□□□□ -0.34
CIT-218ENST00000546026 CCDC9Q9Y3X0 531 aaKnown RBP12.9□□□□□ -0.34
CIT-218ENST00000546026 LRP6O75581 1613 aa12.9□□□□□ -0.34
CIT-218ENST00000546026 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.89□□□□□ -0.35
CIT-218ENST00000546026 ZBTB7BO15156 539 aaPredicted RBP12.89□□□□□ -0.35
CIT-218ENST00000546026 SNRPA1P09661 255 aaKnown RBP12.89□□□□□ -0.35
CIT-218ENST00000546026 EIF2S2P20042 333 aaKnown RBP12.89□□□□□ -0.35
CIT-218ENST00000546026 FLIIQ13045 1269 aa12.89□□□□□ -0.35
CIT-218ENST00000546026 DDB1Q16531 1140 aa12.89□□□□□ -0.35
CIT-218ENST00000546026 ZBTB40Q9NUA8 1239 aa12.89□□□□□ -0.35
CIT-218ENST00000546026 KDM2BQ8NHM5 1336 aa12.88□□□□□ -0.35
CIT-218ENST00000546026 RGS12O14924 1447 aa12.88□□□□□ -0.35
CIT-218ENST00000546026 NECTIN2Q92692 538 aa12.88□□□□□ -0.35
CIT-218ENST00000546026 ZNF496Q96IT1 587 aaPredicted RBP12.88□□□□□ -0.35
CIT-218ENST00000546026 TMOD3Q9NYL9 352 aa12.88□□□□□ -0.35
CIT-218ENST00000546026 USP21Q9UK80 565 aa12.88□□□□□ -0.35
CIT-218ENST00000546026 CCT4P50991 539 aaKnown RBP12.87□□□□□ -0.35
CIT-218ENST00000546026 MEX3CQ5U5Q3 659 aaKnown RBP12.87□□□□□ -0.35
CIT-218ENST00000546026 DDX21Q9NR30 783 aaKnown RBP eCLIP12.87□□□□□ -0.35
CIT-218ENST00000546026 HYPKQ9NX55 129 aa12.87□□□□□ -0.35
CIT-218ENST00000546026 CHPF2Q9P2E5 772 aa12.87□□□□□ -0.35
CIT-218ENST00000546026 PAPPAQ13219 1627 aa12.87□□□□□ -0.35
CIT-218ENST00000546026 FKBP5Q13451 457 aaPredicted RBP12.86□□□□□ -0.35
CIT-218ENST00000546026 RWDD1Q9H446 243 aaPredicted RBP12.86□□□□□ -0.35
CIT-218ENST00000546026 PCDHB15Q9Y5E8 787 aa12.86□□□□□ -0.35
CIT-218ENST00000546026 TOGARAM1Q9Y4F4 1720 aa12.85□□□□□ -0.35
CIT-218ENST00000546026 UBR2Q8IWV8 1755 aa12.85□□□□□ -0.35
CIT-218ENST00000546026 PHAXQ9H814 394 aaKnown RBP12.85□□□□□ -0.35
CIT-218ENST00000546026 ERBB4Q15303 1308 aa12.85□□□□□ -0.35
CIT-218ENST00000546026 PXDNLA1KZ92 1463 aa12.85□□□□□ -0.35
CIT-218ENST00000546026 PRAMEF22A3QJZ6 481 aa12.84□□□□□ -0.35
CIT-218ENST00000546026 IGHDP01880 384 aa12.84□□□□□ -0.35
CIT-218ENST00000546026 HDAC1Q13547 482 aaPredicted RBP12.84□□□□□ -0.35
CIT-218ENST00000546026 VSIG10Q8N0Z9 540 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 94.7 ms