RNA–Protein interactions for RNA: ENST00000545026.1

LEMD3-206, Transcript of LEM domain containing 3, humanhuman

TSL 3

Gene LEMD3, Length 619 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-206ENST00000545026 SOWAHDA6NJG2 315 aa11.09□□□□□ -0.63
LEMD3-206ENST00000545026 J3QL48 77 aa11.09□□□□□ -0.63
LEMD3-206ENST00000545026 ADH1AP07327 375 aa11.09□□□□□ -0.63
LEMD3-206ENST00000545026 IGFBP4P22692 258 aa11.09□□□□□ -0.63
LEMD3-206ENST00000545026 ESCO1Q5FWF5 840 aa11.09□□□□□ -0.63
LEMD3-206ENST00000545026 XAGE2Q96GT9 111 aa11.09□□□□□ -0.63
LEMD3-206ENST00000545026 ARHGEF10LQ9HCE6 1279 aa11.09□□□□□ -0.63
LEMD3-206ENST00000545026 RAB6BQ9NRW1 208 aa11.09□□□□□ -0.63
LEMD3-206ENST00000545026 C21orf2O43822 256 aa11.08□□□□□ -0.64
LEMD3-206ENST00000545026 CBLBQ13191 982 aa11.08□□□□□ -0.64
LEMD3-206ENST00000545026 CAPN12Q6ZSI9 719 aa11.08□□□□□ -0.64
LEMD3-206ENST00000545026 SCG3Q8WXD2 468 aaKnown RBP11.08□□□□□ -0.64
LEMD3-206ENST00000545026 ITPKCQ96DU7 683 aa11.08□□□□□ -0.64
LEMD3-206ENST00000545026 TSPAN10Q9H1Z9 355 aaPredicted RBP11.08□□□□□ -0.64
LEMD3-206ENST00000545026 TOR4AQ9NXH8 423 aa11.08□□□□□ -0.64
LEMD3-206ENST00000545026 TTC24A2A3L6 582 aaPredicted RBP11.07□□□□□ -0.64
LEMD3-206ENST00000545026 IL2RAP01589 272 aa11.07□□□□□ -0.64
LEMD3-206ENST00000545026 FOXK2Q01167 660 aa11.07□□□□□ -0.64
LEMD3-206ENST00000545026 Q6ZVU0 165 aa11.07□□□□□ -0.64
LEMD3-206ENST00000545026 MKNK1Q9BUB5 465 aa11.07□□□□□ -0.64
LEMD3-206ENST00000545026 SEPT3Q9UH03 358 aa11.07□□□□□ -0.64
LEMD3-206ENST00000545026 ATAD2Q6PL18 1390 aa11.06□□□□□ -0.64
LEMD3-206ENST00000545026 SMTNP53814 917 aa11.06□□□□□ -0.64
LEMD3-206ENST00000545026 MTFR1Q15390 333 aa11.06□□□□□ -0.64
LEMD3-206ENST00000545026 CYP4X1Q8N118 509 aa11.06□□□□□ -0.64
LEMD3-206ENST00000545026 ZFAND3Q9H8U3 227 aa11.06□□□□□ -0.64
LEMD3-206ENST00000545026 SCHIP1Q9P0W5 487 aaPredicted RBP11.06□□□□□ -0.64
LEMD3-206ENST00000545026 EGFL7Q9UHF1 273 aa11.06□□□□□ -0.64
LEMD3-206ENST00000545026 HRH3Q9Y5N1 445 aa11.06□□□□□ -0.64
LEMD3-206ENST00000545026 A6NJY4 79 aa11.05□□□□□ -0.64
LEMD3-206ENST00000545026 TNFRSF10AO00220 468 aa11.05□□□□□ -0.64
LEMD3-206ENST00000545026 FOXO3O43524 673 aa11.05□□□□□ -0.64
LEMD3-206ENST00000545026 ZIC2O95409 532 aaPredicted RBP11.05□□□□□ -0.64
LEMD3-206ENST00000545026 WDR4P57081 412 aaKnown RBP11.05□□□□□ -0.64
LEMD3-206ENST00000545026 COL26A1Q96A83 441 aa11.05□□□□□ -0.64
LEMD3-206ENST00000545026 A0A1W2PRU2 124 aa11.04□□□□□ -0.64
LEMD3-206ENST00000545026 PTCD1O75127 700 aaKnown RBP11.04□□□□□ -0.64
LEMD3-206ENST00000545026 TIMP2P16035 220 aa11.04□□□□□ -0.64
LEMD3-206ENST00000545026 SMPD1P17405 629 aa11.04□□□□□ -0.64
LEMD3-206ENST00000545026 PTGIRP43119 386 aa11.04□□□□□ -0.64
LEMD3-206ENST00000545026 TRIM67Q6ZTA4 783 aa11.04□□□□□ -0.64
LEMD3-206ENST00000545026 GTF3C2Q8WUA4 911 aaPredicted RBP11.04□□□□□ -0.64
LEMD3-206ENST00000545026 CNKSR1Q969H4 720 aa11.04□□□□□ -0.64
LEMD3-206ENST00000545026 ESYT1Q9BSJ8 1104 aa11.04□□□□□ -0.64
LEMD3-206ENST00000545026 ABL1P00519 1130 aa11.03□□□□□ -0.64
LEMD3-206ENST00000545026 CLN3Q13286 438 aa11.03□□□□□ -0.64
LEMD3-206ENST00000545026 NPM2Q86SE8 214 aaKnown RBP11.03□□□□□ -0.64
LEMD3-206ENST00000545026 ICMTO60725 284 aa11.02□□□□□ -0.65
LEMD3-206ENST00000545026 PRR20EP86478 221 aa11.02□□□□□ -0.65
LEMD3-206ENST00000545026 PRR20CP86479 221 aa11.02□□□□□ -0.65
LEMD3-206ENST00000545026 PRR20DP86480 221 aa11.02□□□□□ -0.65
LEMD3-206ENST00000545026 PRR20BP86481 221 aa11.02□□□□□ -0.65
LEMD3-206ENST00000545026 PRR20AP86496 221 aa11.02□□□□□ -0.65
LEMD3-206ENST00000545026 ZNF211Q13398 564 aaPredicted RBP11.02□□□□□ -0.65
LEMD3-206ENST00000545026 TBCELQ5QJ74 424 aa11.02□□□□□ -0.65
LEMD3-206ENST00000545026 SLC9A9Q8IVB4 645 aa11.02□□□□□ -0.65
LEMD3-206ENST00000545026 AGBL1Q96MI9 1066 aa11.02□□□□□ -0.65
LEMD3-206ENST00000545026 DNMT3AQ9Y6K1 912 aaPredicted RBP11.02□□□□□ -0.65
LEMD3-206ENST00000545026 CDK2AP1O14519 115 aa11.01□□□□□ -0.65
LEMD3-206ENST00000545026 PPP1R12BO60237 982 aaPredicted RBP11.01□□□□□ -0.65
LEMD3-206ENST00000545026 STAG2Q8N3U4 1231 aa11.01□□□□□ -0.65
LEMD3-206ENST00000545026 CHMP7Q8WUX9 453 aaPredicted RBP11.01□□□□□ -0.65
LEMD3-206ENST00000545026 ANO2Q9NQ90 1003 aa11.01□□□□□ -0.65
LEMD3-206ENST00000545026 IQSEC3Q9UPP2 1182 aaPredicted RBP11.01□□□□□ -0.65
LEMD3-206ENST00000545026 USP3Q9Y6I4 520 aa11.01□□□□□ -0.65
LEMD3-206ENST00000545026 TLR1Q15399 786 aa11□□□□□ -0.65
LEMD3-206ENST00000545026 FOXD4L5Q5VV16 416 aaPredicted RBP11□□□□□ -0.65
LEMD3-206ENST00000545026 FOXD4L4Q8WXT5 416 aaPredicted RBP11□□□□□ -0.65
LEMD3-206ENST00000545026 C2orf49Q9BVC5 232 aaPredicted RBP11□□□□□ -0.65
LEMD3-206ENST00000545026 FHDC1Q9C0D6 1143 aaPredicted RBP11□□□□□ -0.65
LEMD3-206ENST00000545026 CENPCQ03188 943 aa10.99□□□□□ -0.65
LEMD3-206ENST00000545026 NAA30Q147X3 362 aaPredicted RBP10.99□□□□□ -0.65
LEMD3-206ENST00000545026 H3BRB1 525 aa10.98□□□□□ -0.65
LEMD3-206ENST00000545026 PSMA6P60900 246 aaKnown RBP10.98□□□□□ -0.65
LEMD3-206ENST00000545026 RELBQ01201 579 aa10.98□□□□□ -0.65
LEMD3-206ENST00000545026 FKBP4Q02790 459 aaKnown RBP eCLIP10.98□□□□□ -0.65
LEMD3-206ENST00000545026 ECM1Q16610 540 aa10.98□□□□□ -0.65
LEMD3-206ENST00000545026 HPS1Q92902 700 aa10.98□□□□□ -0.65
LEMD3-206ENST00000545026 TUT1Q9H6E5 874 aaKnown RBP10.98□□□□□ -0.65
LEMD3-206ENST00000545026 MEN1O00255 615 aa10.97□□□□□ -0.65
LEMD3-206ENST00000545026 MTMR3Q13615 1198 aa10.97□□□□□ -0.65
LEMD3-206ENST00000545026 POTEAQ6S8J7 498 aa10.97□□□□□ -0.65
LEMD3-206ENST00000545026 ZNF295-AS1Q8N0V1 137 aa10.97□□□□□ -0.65
LEMD3-206ENST00000545026 MEIOBQ8N635 442 aa10.97□□□□□ -0.65
LEMD3-206ENST00000545026 VTI1AQ96AJ9 217 aa10.97□□□□□ -0.65
LEMD3-206ENST00000545026 ZNF395Q9H8N7 513 aaPredicted RBP10.97□□□□□ -0.65
LEMD3-206ENST00000545026 BIN2Q9UBW5 565 aaPredicted RBP10.97□□□□□ -0.65
LEMD3-206ENST00000545026 SF3B2Q13435 895 aaKnown RBP10.96□□□□□ -0.65
LEMD3-206ENST00000545026 GLYCTKQ8IVS8 523 aa10.96□□□□□ -0.65
LEMD3-206ENST00000545026 HELQQ8TDG4 1101 aa10.96□□□□□ -0.65
LEMD3-206ENST00000545026 NLRP3Q96P20 1036 aa10.96□□□□□ -0.65
LEMD3-206ENST00000545026 DNAJC14Q6Y2X3 702 aaPredicted RBP10.95□□□□□ -0.66
LEMD3-206ENST00000545026 SAP130Q9H0E3 1048 aa10.95□□□□□ -0.66
LEMD3-206ENST00000545026 MARSP56192 900 aaKnown RBP10.94□□□□□ -0.66
LEMD3-206ENST00000545026 TEAD4Q15561 434 aa10.94□□□□□ -0.66
LEMD3-206ENST00000545026 NOM1Q5C9Z4 860 aaKnown RBP10.94□□□□□ -0.66
LEMD3-206ENST00000545026 PPARGC1BQ86YN6 1023 aaKnown RBP10.94□□□□□ -0.66
LEMD3-206ENST00000545026 NBPF15Q8N660 670 aa10.94□□□□□ -0.66
LEMD3-206ENST00000545026 ZDHHC1Q8WTX9 485 aa10.94□□□□□ -0.66
LEMD3-206ENST00000545026 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 89.8 ms