RNA–Protein interactions for RNA: ENST00000543364.1

RAB35-205, Transcript of RAB35, member RAS oncogene family, humanhuman

TSL 3

Gene RAB35, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB35-205ENST00000543364 SLC52A2Q9HAB3 445 aa20.38■□□□□ 0.85
RAB35-205ENST00000543364 TFCP2L1Q9NZI6 479 aa20.38■□□□□ 0.85
RAB35-205ENST00000543364 SCN11AQ9UI33 1791 aa20.38■□□□□ 0.85
RAB35-205ENST00000543364 GNAT3A8MTJ3 354 aa20.37■□□□□ 0.85
RAB35-205ENST00000543364 ITPK1Q13572 414 aa20.37■□□□□ 0.85
RAB35-205ENST00000543364 MAP3K5Q99683 1374 aa20.36■□□□□ 0.85
RAB35-205ENST00000543364 ATP6V1AP38606 617 aa20.36■□□□□ 0.85
RAB35-205ENST00000543364 ATF5Q9Y2D1 282 aaPredicted RBP20.36■□□□□ 0.85
RAB35-205ENST00000543364 PTCD1O75127 700 aaKnown RBP20.35■□□□□ 0.85
RAB35-205ENST00000543364 SMIM5Q71RC9 77 aa20.35■□□□□ 0.85
RAB35-205ENST00000543364 LINC00116Q8NCU8 138 aa20.35■□□□□ 0.85
RAB35-205ENST00000543364 CASZ1Q86V15 1759 aa20.35■□□□□ 0.85
RAB35-205ENST00000543364 PNPLA7Q6ZV29 1317 aa20.34■□□□□ 0.85
RAB35-205ENST00000543364 SLC39A6Q13433 755 aa20.34■□□□□ 0.85
RAB35-205ENST00000543364 PLEKHF1Q96S99 279 aa20.34■□□□□ 0.85
RAB35-205ENST00000543364 SPON1Q9HCB6 807 aa20.34■□□□□ 0.85
RAB35-205ENST00000543364 C5P01031 1676 aa20.32■□□□□ 0.84
RAB35-205ENST00000543364 VIRMAQ69YN4 1812 aaKnown RBP20.32■□□□□ 0.84
RAB35-205ENST00000543364 TAF1LQ8IZX4 1826 aa20.32■□□□□ 0.84
RAB35-205ENST00000543364 AMIGO3Q86WK7 504 aa20.32■□□□□ 0.84
RAB35-205ENST00000543364 DCTN1Q14203 1278 aa20.31■□□□□ 0.84
RAB35-205ENST00000543364 COL23A1Q86Y22 540 aaPredicted RBP20.31■□□□□ 0.84
RAB35-205ENST00000543364 TUBGCP6Q96RT7 1819 aa20.31■□□□□ 0.84
RAB35-205ENST00000543364 ADAMTS7Q9UKP4 1686 aa20.31■□□□□ 0.84
RAB35-205ENST00000543364 LRP5O75197 1615 aa20.31■□□□□ 0.84
RAB35-205ENST00000543364 MSH5O43196 834 aa20.3■□□□□ 0.84
RAB35-205ENST00000543364 TEFQ10587 303 aa20.3■□□□□ 0.84
RAB35-205ENST00000543364 MCM10Q7L590 875 aa20.3■□□□□ 0.84
RAB35-205ENST00000543364 AK7Q96M32 723 aa20.3■□□□□ 0.84
RAB35-205ENST00000543364 MRC1P22897 1456 aa20.3■□□□□ 0.84
RAB35-205ENST00000543364 C4BP0C0L5 1744 aa20.28■□□□□ 0.84
RAB35-205ENST00000543364 NEFMP07197 916 aa20.28■□□□□ 0.84
RAB35-205ENST00000543364 PTGER2P43116 358 aa20.28■□□□□ 0.84
RAB35-205ENST00000543364 CCDC184Q52MB2 194 aa20.28■□□□□ 0.84
RAB35-205ENST00000543364 RTF1Q92541 710 aaKnown RBP20.28■□□□□ 0.84
RAB35-205ENST00000543364 MTFR1LQ9H019 292 aa20.28■□□□□ 0.84
RAB35-205ENST00000543364 CEMIPQ8WUJ3 1361 aa20.27■□□□□ 0.84
RAB35-205ENST00000543364 PHF14O94880 888 aa20.27■□□□□ 0.84
RAB35-205ENST00000543364 GNPATO15228 680 aa20.26■□□□□ 0.83
RAB35-205ENST00000543364 HMGB2P26583 209 aaKnown RBP20.26■□□□□ 0.83
RAB35-205ENST00000543364 NFE2L2Q16236 605 aa20.26■□□□□ 0.83
RAB35-205ENST00000543364 CCDC146Q8IYE0 955 aa20.26■□□□□ 0.83
RAB35-205ENST00000543364 PNNQ9H307 717 aaKnown RBP20.26■□□□□ 0.83
RAB35-205ENST00000543364 ADAMTS8Q9UP79 889 aa20.26■□□□□ 0.83
RAB35-205ENST00000543364 MAPK8IP3Q9UPT6 1336 aa20.26■□□□□ 0.83
RAB35-205ENST00000543364 QSER1Q2KHR3 1735 aa20.25■□□□□ 0.83
RAB35-205ENST00000543364 KCNQ3O43525 872 aa20.25■□□□□ 0.83
RAB35-205ENST00000543364 WDR43Q15061 677 aaKnown RBP eCLIP20.25■□□□□ 0.83
RAB35-205ENST00000543364 DNAJC10Q8IXB1 793 aa20.25■□□□□ 0.83
RAB35-205ENST00000543364 PPP1R1BQ9UD71 204 aaPredicted RBP20.25■□□□□ 0.83
RAB35-205ENST00000543364 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.24■□□□□ 0.83
RAB35-205ENST00000543364 HTATSF1O43719 755 aaKnown RBP20.24■□□□□ 0.83
RAB35-205ENST00000543364 SLC16A10Q8TF71 515 aa20.24■□□□□ 0.83
RAB35-205ENST00000543364 SGIP1Q9BQI5 828 aa20.24■□□□□ 0.83
RAB35-205ENST00000543364 BTBD11A6QL63 1104 aa20.23■□□□□ 0.83
RAB35-205ENST00000543364 MSL1Q68DK7 614 aa20.23■□□□□ 0.83
RAB35-205ENST00000543364 TTC5Q8N0Z6 440 aa20.23■□□□□ 0.83
RAB35-205ENST00000543364 KCPQ6ZWJ8 1503 aa20.22■□□□□ 0.83
RAB35-205ENST00000543364 ANP32CO43423 234 aa20.22■□□□□ 0.83
RAB35-205ENST00000543364 CRKLP46109 303 aaKnown RBP20.22■□□□□ 0.83
RAB35-205ENST00000543364 RC3H1Q5TC82 1133 aaKnown RBP20.22■□□□□ 0.83
RAB35-205ENST00000543364 ZNF790Q6PG37 636 aa20.22■□□□□ 0.83
RAB35-205ENST00000543364 FLAD1Q8NFF5 587 aa20.22■□□□□ 0.83
RAB35-205ENST00000543364 ZNF496Q96IT1 587 aaPredicted RBP20.22■□□□□ 0.83
RAB35-205ENST00000543364 THUMPD2Q9BTF0 503 aaKnown RBP20.22■□□□□ 0.83
RAB35-205ENST00000543364 ZNF831Q5JPB2 1677 aa20.22■□□□□ 0.83
RAB35-205ENST00000543364 UBR3Q6ZT12 1888 aa20.22■□□□□ 0.83
RAB35-205ENST00000543364 SIPA1L3O60292 1781 aaPredicted RBP20.21■□□□□ 0.83
RAB35-205ENST00000543364 MIS18AQ9NYP9 233 aa20.21■□□□□ 0.83
RAB35-205ENST00000543364 RRP7AQ9Y3A4 280 aaKnown RBP20.21■□□□□ 0.83
RAB35-205ENST00000543364 DLG5Q8TDM6 1919 aa20.21■□□□□ 0.83
RAB35-205ENST00000543364 TJP1Q07157 1748 aa20.2■□□□□ 0.82
RAB35-205ENST00000543364 RPS6KA4O75676 772 aa20.2■□□□□ 0.82
RAB35-205ENST00000543364 SSFA2P28290 1259 aa20.2■□□□□ 0.82
RAB35-205ENST00000543364 RIPK4P57078 832 aa20.2■□□□□ 0.82
RAB35-205ENST00000543364 INTS5Q6P9B9 1019 aaKnown RBP20.2■□□□□ 0.82
RAB35-205ENST00000543364 RTCBQ9Y3I0 505 aaKnown RBP20.2■□□□□ 0.82
RAB35-205ENST00000543364 MYH14Q7Z406 1995 aaKnown RBP20.2■□□□□ 0.82
RAB35-205ENST00000543364 CNTNAP4Q9C0A0 1308 aa20.2■□□□□ 0.82
RAB35-205ENST00000543364 COL5A3P25940 1745 aaPredicted RBP20.19■□□□□ 0.82
RAB35-205ENST00000543364 CYP19A1P11511 503 aaPredicted RBP20.19■□□□□ 0.82
RAB35-205ENST00000543364 TMPOP42166 694 aaKnown RBP20.19■□□□□ 0.82
RAB35-205ENST00000543364 NEUROD2Q15784 382 aa20.19■□□□□ 0.82
RAB35-205ENST00000543364 RUNDC1Q96C34 613 aa20.19■□□□□ 0.82
RAB35-205ENST00000543364 TAF7Q15545 349 aaPredicted RBP20.18■□□□□ 0.82
RAB35-205ENST00000543364 TRAPPC3LQ5T215 181 aa20.18■□□□□ 0.82
RAB35-205ENST00000543364 VSIG10Q8N0Z9 540 aa20.18■□□□□ 0.82
RAB35-205ENST00000543364 ARHGEF1Q92888 912 aaKnown RBP20.18■□□□□ 0.82
RAB35-205ENST00000543364 ARXQ96QS3 562 aa20.18■□□□□ 0.82
RAB35-205ENST00000543364 UBR2Q8IWV8 1755 aa20.16■□□□□ 0.82
RAB35-205ENST00000543364 POLD1P28340 1107 aa20.16■□□□□ 0.82
RAB35-205ENST00000543364 FMNL2Q96PY5 1086 aa20.16■□□□□ 0.82
RAB35-205ENST00000543364 CCDC87Q9NVE4 849 aa20.16■□□□□ 0.82
RAB35-205ENST00000543364 HEG1Q9ULI3 1381 aa20.16■□□□□ 0.82
RAB35-205ENST00000543364 PRAMEF22A3QJZ6 481 aa20.14■□□□□ 0.81
RAB35-205ENST00000543364 FHDC1Q9C0D6 1143 aaPredicted RBP20.14■□□□□ 0.81
RAB35-205ENST00000543364 ZBTB1Q9Y2K1 713 aa20.14■□□□□ 0.81
RAB35-205ENST00000543364 MRS2Q9HD23 443 aa20.13■□□□□ 0.81
RAB35-205ENST00000543364 CICQ96RK0 1608 aaPredicted RBP20.13■□□□□ 0.81
RAB35-205ENST00000543364 STARD3NLO95772 234 aa20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms