RNA–Protein interactions for RNA: ENST00000543210.6

ABR-204, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

TSL 2 BASIC

Gene ABR, Length 1,049 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-204ENST00000543210 UBR3Q6ZT12 1888 aa24.02■■□□□ 1.44
ABR-204ENST00000543210 ARXQ96QS3 562 aa24.01■■□□□ 1.43
ABR-204ENST00000543210 SYT17Q9BSW7 474 aa24.01■■□□□ 1.43
ABR-204ENST00000543210 AMIGO3Q86WK7 504 aa24■■□□□ 1.43
ABR-204ENST00000543210 SCN11AQ9UI33 1791 aa24■■□□□ 1.43
ABR-204ENST00000543210 HMGB2P26583 209 aaKnown RBP23.99■■□□□ 1.43
ABR-204ENST00000543210 ITPK1Q13572 414 aa23.99■■□□□ 1.43
ABR-204ENST00000543210 LINC00116Q8NCU8 138 aa23.99■■□□□ 1.43
ABR-204ENST00000543210 ZNF831Q5JPB2 1677 aa23.99■■□□□ 1.43
ABR-204ENST00000543210 U2AF1L5P0DN76 240 aaPredicted RBP23.98■■□□□ 1.43
ABR-204ENST00000543210 U2AF1Q01081 240 aaKnown RBP eCLIP23.98■■□□□ 1.43
ABR-204ENST00000543210 AKAP4Q5JQC9 854 aa23.98■■□□□ 1.43
ABR-204ENST00000543210 MAP3K5Q99683 1374 aa23.98■■□□□ 1.43
ABR-204ENST00000543210 ZNF316A6NFI3 1004 aaPredicted RBP23.97■■□□□ 1.43
ABR-204ENST00000543210 SLC4A9Q96Q91 983 aa23.97■■□□□ 1.43
ABR-204ENST00000543210 CABP4P57796 275 aa23.96■■□□□ 1.43
ABR-204ENST00000543210 ATP6V1AP38606 617 aa23.95■■□□□ 1.42
ABR-204ENST00000543210 MTHFSDQ2M296 383 aaKnown RBP23.95■■□□□ 1.42
ABR-204ENST00000543210 SMIM5Q71RC9 77 aa23.95■■□□□ 1.42
ABR-204ENST00000543210 VIRMAQ69YN4 1812 aaKnown RBP23.95■■□□□ 1.42
ABR-204ENST00000543210 MSH5O43196 834 aa23.94■■□□□ 1.42
ABR-204ENST00000543210 FLAD1Q8NFF5 587 aa23.94■■□□□ 1.42
ABR-204ENST00000543210 AK7Q96M32 723 aa23.94■■□□□ 1.42
ABR-204ENST00000543210 ADAMTS7Q9UKP4 1686 aa23.93■■□□□ 1.42
ABR-204ENST00000543210 MYBBP1AQ9BQG0 1328 aaKnown RBP23.93■■□□□ 1.42
ABR-204ENST00000543210 POLD1P28340 1107 aa23.93■■□□□ 1.42
ABR-204ENST00000543210 PRKAR2BP31323 418 aa23.93■■□□□ 1.42
ABR-204ENST00000543210 NFATC2IPQ8NCF5 419 aa23.93■■□□□ 1.42
ABR-204ENST00000543210 RSPH6AQ9H0K4 717 aa23.93■■□□□ 1.42
ABR-204ENST00000543210 COL5A3P25940 1745 aaPredicted RBP23.93■■□□□ 1.42
ABR-204ENST00000543210 GAS2L2Q8NHY3 880 aa23.92■■□□□ 1.42
ABR-204ENST00000543210 FCHSD2O94868 740 aa23.91■■□□□ 1.42
ABR-204ENST00000543210 MSL1Q68DK7 614 aa23.91■■□□□ 1.42
ABR-204ENST00000543210 MRC1P22897 1456 aa23.9■■□□□ 1.42
ABR-204ENST00000543210 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.9■■□□□ 1.42
ABR-204ENST00000543210 RBM42Q9BTD8 480 aaKnown RBP23.9■■□□□ 1.42
ABR-204ENST00000543210 LGR6Q9HBX8 967 aa23.9■■□□□ 1.42
ABR-204ENST00000543210 PHF14O94880 888 aa23.89■■□□□ 1.41
ABR-204ENST00000543210 SSFA2P28290 1259 aa23.89■■□□□ 1.41
ABR-204ENST00000543210 RNMTO43148 476 aaKnown RBP23.88■■□□□ 1.41
ABR-204ENST00000543210 CICQ96RK0 1608 aaPredicted RBP23.88■■□□□ 1.41
ABR-204ENST00000543210 MYH14Q7Z406 1995 aaKnown RBP23.87■■□□□ 1.41
ABR-204ENST00000543210 GNPATO15228 680 aa23.87■■□□□ 1.41
ABR-204ENST00000543210 NEFMP07197 916 aa23.87■■□□□ 1.41
ABR-204ENST00000543210 PHACTR3Q96KR7 559 aa23.87■■□□□ 1.41
ABR-204ENST00000543210 PRKRIP1Q9H875 184 aaPredicted RBP23.87■■□□□ 1.41
ABR-204ENST00000543210 SLC52A2Q9HAB3 445 aa23.87■■□□□ 1.41
ABR-204ENST00000543210 TJP1Q07157 1748 aa23.87■■□□□ 1.41
ABR-204ENST00000543210 DCAF8L1A6NGE4 600 aa23.86■■□□□ 1.41
ABR-204ENST00000543210 GNAT3A8MTJ3 354 aa23.86■■□□□ 1.41
ABR-204ENST00000543210 PTCD1O75127 700 aaKnown RBP23.85■■□□□ 1.41
ABR-204ENST00000543210 RC3H1Q5TC82 1133 aaKnown RBP23.85■■□□□ 1.41
ABR-204ENST00000543210 CNTNAP4Q9C0A0 1308 aa23.84■■□□□ 1.41
ABR-204ENST00000543210 KLHL34Q8N239 644 aa23.83■■□□□ 1.41
ABR-204ENST00000543210 NLGN2Q8NFZ4 835 aa23.83■■□□□ 1.41
ABR-204ENST00000543210 PNNQ9H307 717 aaKnown RBP23.83■■□□□ 1.41
ABR-204ENST00000543210 RTCBQ9Y3I0 505 aaKnown RBP23.8■■□□□ 1.4
ABR-204ENST00000543210 UTRNP46939 3433 aa23.8■■□□□ 1.4
ABR-204ENST00000543210 KCPQ6ZWJ8 1503 aa23.79■■□□□ 1.4
ABR-204ENST00000543210 RPS6KA4O75676 772 aa23.79■■□□□ 1.4
ABR-204ENST00000543210 YY1P25490 414 aa23.79■■□□□ 1.4
ABR-204ENST00000543210 TEFQ10587 303 aa23.79■■□□□ 1.4
ABR-204ENST00000543210 SLC39A6Q13433 755 aa23.79■■□□□ 1.4
ABR-204ENST00000543210 RTF1Q92541 710 aaKnown RBP23.79■■□□□ 1.4
ABR-204ENST00000543210 C4AP0C0L4 1744 aa23.79■■□□□ 1.4
ABR-204ENST00000543210 SIPA1L3O60292 1781 aaPredicted RBP23.78■■□□□ 1.4
ABR-204ENST00000543210 UBR2Q8IWV8 1755 aa23.78■■□□□ 1.4
ABR-204ENST00000543210 IL17REQ8NFR9 667 aa23.78■■□□□ 1.4
ABR-204ENST00000543210 MAPK8IP3Q9UPT6 1336 aa23.78■■□□□ 1.4
ABR-204ENST00000543210 CRKLP46109 303 aaKnown RBP23.77■■□□□ 1.4
ABR-204ENST00000543210 TRAPPC3LQ5T215 181 aa23.77■■□□□ 1.4
ABR-204ENST00000543210 ARHGEF1Q92888 912 aaKnown RBP23.77■■□□□ 1.4
ABR-204ENST00000543210 ADRA2BP18089 450 aa23.76■■□□□ 1.39
ABR-204ENST00000543210 WDR43Q15061 677 aaKnown RBP eCLIP23.76■■□□□ 1.39
ABR-204ENST00000543210 PLEKHF1Q96S99 279 aa23.76■■□□□ 1.39
ABR-204ENST00000543210 DNAJC10Q8IXB1 793 aa23.75■■□□□ 1.39
ABR-204ENST00000543210 CD2APQ9Y5K6 639 aa23.75■■□□□ 1.39
ABR-204ENST00000543210 CHD4Q14839 1912 aa23.74■■□□□ 1.39
ABR-204ENST00000543210 INTS5Q6P9B9 1019 aaKnown RBP23.74■■□□□ 1.39
ABR-204ENST00000543210 CEMIPQ8WUJ3 1361 aa23.74■■□□□ 1.39
ABR-204ENST00000543210 HTATSF1O43719 755 aaKnown RBP23.73■■□□□ 1.39
ABR-204ENST00000543210 TTC5Q8N0Z6 440 aa23.73■■□□□ 1.39
ABR-204ENST00000543210 ANP32CO43423 234 aa23.72■■□□□ 1.39
ABR-204ENST00000543210 GPR162Q16538 588 aa23.72■■□□□ 1.39
ABR-204ENST00000543210 MCM10Q7L590 875 aa23.72■■□□□ 1.39
ABR-204ENST00000543210 CYP19A1P11511 503 aaPredicted RBP23.71■■□□□ 1.39
ABR-204ENST00000543210 GYS1P13807 737 aa23.71■■□□□ 1.39
ABR-204ENST00000543210 MMP10P09238 476 aa23.7■■□□□ 1.38
ABR-204ENST00000543210 NFE2L2Q16236 605 aa23.7■■□□□ 1.38
ABR-204ENST00000543210 GOLGB1Q14789 3259 aaKnown RBP23.69■■□□□ 1.38
ABR-204ENST00000543210 YBX3P16989 372 aaKnown RBP eCLIP23.69■■□□□ 1.38
ABR-204ENST00000543210 RFC4P35249 363 aa23.69■■□□□ 1.38
ABR-204ENST00000543210 DCTN1Q14203 1278 aa23.69■■□□□ 1.38
ABR-204ENST00000543210 VSIG10Q8N0Z9 540 aa23.69■■□□□ 1.38
ABR-204ENST00000543210 NLGN1Q8N2Q7 840 aa23.69■■□□□ 1.38
ABR-204ENST00000543210 CCDC87Q9NVE4 849 aa23.69■■□□□ 1.38
ABR-204ENST00000543210 KIF13BQ9NQT8 1826 aa23.68■■□□□ 1.38
ABR-204ENST00000543210 BTBD11A6QL63 1104 aa23.68■■□□□ 1.38
ABR-204ENST00000543210 ZNF790Q6PG37 636 aa23.67■■□□□ 1.38
ABR-204ENST00000543210 PELP1Q8IZL8 1130 aaKnown RBP23.67■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms