RNA–Protein interactions for RNA: ENST00000542495.5

ATPAF1-212, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-212ENST00000542495 EMILIN1Q9Y6C2 1016 aa6.52□□□□□ -1.37
ATPAF1-212ENST00000542495 MFAP1P55081 439 aaKnown RBP6.52□□□□□ -1.37
ATPAF1-212ENST00000542495 LMOD3Q0VAK6 560 aa6.52□□□□□ -1.37
ATPAF1-212ENST00000542495 NME9Q86XW9 330 aa6.52□□□□□ -1.37
ATPAF1-212ENST00000542495 TSPYL6Q8N831 410 aa6.52□□□□□ -1.37
ATPAF1-212ENST00000542495 NUDT16Q96DE0 195 aaKnown RBP6.52□□□□□ -1.37
ATPAF1-212ENST00000542495 LARP6Q9BRS8 491 aaKnown RBP6.52□□□□□ -1.37
ATPAF1-212ENST00000542495 MBIPQ9NS73 344 aa6.52□□□□□ -1.37
ATPAF1-212ENST00000542495 CHMP5Q9NZZ3 219 aa6.52□□□□□ -1.37
ATPAF1-212ENST00000542495 ITSN1Q15811 1721 aa6.51□□□□□ -1.37
ATPAF1-212ENST00000542495 HMOX1P09601 288 aa6.51□□□□□ -1.37
ATPAF1-212ENST00000542495 MCM4P33991 863 aa6.51□□□□□ -1.37
ATPAF1-212ENST00000542495 SIRT2Q8IXJ6 389 aa6.51□□□□□ -1.37
ATPAF1-212ENST00000542495 THUMPD2Q9BTF0 503 aaKnown RBP6.51□□□□□ -1.37
ATPAF1-212ENST00000542495 LNPKQ9C0E8 428 aa6.51□□□□□ -1.37
ATPAF1-212ENST00000542495 TOPAZ1Q8N9V7 1692 aa6.51□□□□□ -1.37
ATPAF1-212ENST00000542495 LTBP4Q8N2S1 1624 aa6.5□□□□□ -1.37
ATPAF1-212ENST00000542495 RGPD1P0DJD0 1748 aa6.5□□□□□ -1.37
ATPAF1-212ENST00000542495 TWISTNBQ3B726 338 aaPredicted RBP6.5□□□□□ -1.37
ATPAF1-212ENST00000542495 CRISPLD2Q9H0B8 497 aa6.5□□□□□ -1.37
ATPAF1-212ENST00000542495 NALCNQ8IZF0 1738 aa6.5□□□□□ -1.37
ATPAF1-212ENST00000542495 PRR36Q9H6K5 1346 aa6.5□□□□□ -1.37
ATPAF1-212ENST00000542495 FSD2A1L4K1 749 aa6.49□□□□□ -1.37
ATPAF1-212ENST00000542495 C8orf58Q8NAV2 365 aa6.49□□□□□ -1.37
ATPAF1-212ENST00000542495 COG3Q96JB2 828 aa6.49□□□□□ -1.37
ATPAF1-212ENST00000542495 KIF2CQ99661 725 aa6.49□□□□□ -1.37
ATPAF1-212ENST00000542495 API5Q9BZZ5 524 aaKnown RBP6.49□□□□□ -1.37
ATPAF1-212ENST00000542495 GPBP1L1Q9HC44 474 aaPredicted RBP6.49□□□□□ -1.37
ATPAF1-212ENST00000542495 UBR1Q8IWV7 1749 aa6.49□□□□□ -1.37
ATPAF1-212ENST00000542495 OVOS2A0A0J9YW53 1432 aa6.49□□□□□ -1.37
ATPAF1-212ENST00000542495 RGS12O14924 1447 aa6.49□□□□□ -1.37
ATPAF1-212ENST00000542495 OVOS2Q6IE36 1432 aa6.49□□□□□ -1.37
ATPAF1-212ENST00000542495 MAP3K13O43283 966 aa6.49□□□□□ -1.37
ATPAF1-212ENST00000542495 CAMK2BQ13554 666 aa6.49□□□□□ -1.37
ATPAF1-212ENST00000542495 L1TD1Q5T7N2 865 aaKnown RBP6.49□□□□□ -1.37
ATPAF1-212ENST00000542495 INTS3Q68E01 1043 aaKnown RBP6.49□□□□□ -1.37
ATPAF1-212ENST00000542495 TXNDC2Q86VQ3 553 aa6.49□□□□□ -1.37
ATPAF1-212ENST00000542495 SPNS2Q8IVW8 549 aa6.49□□□□□ -1.37
ATPAF1-212ENST00000542495 HSCBQ8IWL3 235 aa6.49□□□□□ -1.37
ATPAF1-212ENST00000542495 KIF12Q96FN5 646 aa6.49□□□□□ -1.37
ATPAF1-212ENST00000542495 MS4A4AQ96JQ5 239 aa6.49□□□□□ -1.37
ATPAF1-212ENST00000542495 ADAMTS13Q76LX8 1427 aa6.48□□□□□ -1.37
ATPAF1-212ENST00000542495 SIPA1L2Q9P2F8 1722 aaPredicted RBP6.48□□□□□ -1.37
ATPAF1-212ENST00000542495 KIAA0232Q92628 1395 aa6.48□□□□□ -1.37
ATPAF1-212ENST00000542495 ROBO2Q9HCK4 1378 aa6.48□□□□□ -1.37
ATPAF1-212ENST00000542495 TMEM2Q9UHN6 1383 aa6.48□□□□□ -1.37
ATPAF1-212ENST00000542495 ZNF142P52746 1687 aaPredicted RBP6.48□□□□□ -1.37
ATPAF1-212ENST00000542495 PLEKHG3A1L390 1219 aa6.48□□□□□ -1.37
ATPAF1-212ENST00000542495 CHL1O00533 1208 aa6.48□□□□□ -1.37
ATPAF1-212ENST00000542495 HDGFP51858 240 aaKnown RBP6.48□□□□□ -1.37
ATPAF1-212ENST00000542495 ATN1P54259 1190 aaPredicted RBP6.48□□□□□ -1.37
ATPAF1-212ENST00000542495 RRS1Q15050 365 aaKnown RBP6.48□□□□□ -1.37
ATPAF1-212ENST00000542495 ANKRD45Q5TZF3 282 aa6.48□□□□□ -1.37
ATPAF1-212ENST00000542495 FAM43AQ8N2R8 423 aa6.48□□□□□ -1.37
ATPAF1-212ENST00000542495 SSH2Q76I76 1423 aa6.48□□□□□ -1.37
ATPAF1-212ENST00000542495 ATP10DQ9P241 1426 aa6.48□□□□□ -1.37
ATPAF1-212ENST00000542495 PEAK1Q9H792 1746 aa6.48□□□□□ -1.37
ATPAF1-212ENST00000542495 USP31Q70CQ4 1352 aa6.47□□□□□ -1.37
ATPAF1-212ENST00000542495 TNRQ92752 1358 aa6.47□□□□□ -1.37
ATPAF1-212ENST00000542495 FAM83GA6ND36 823 aa6.47□□□□□ -1.37
ATPAF1-212ENST00000542495 SOCS7O14512 581 aa6.47□□□□□ -1.37
ATPAF1-212ENST00000542495 EIF4A2Q14240 407 aaKnown RBP6.47□□□□□ -1.37
ATPAF1-212ENST00000542495 TBC1D9Q6ZT07 1266 aa6.47□□□□□ -1.37
ATPAF1-212ENST00000542495 DDX27Q96GQ7 796 aaKnown RBP6.47□□□□□ -1.37
ATPAF1-212ENST00000542495 AK7Q96M32 723 aa6.47□□□□□ -1.37
ATPAF1-212ENST00000542495 DCTPP1Q9H773 170 aa6.47□□□□□ -1.37
ATPAF1-212ENST00000542495 C1orf115Q9H7X2 142 aa6.47□□□□□ -1.37
ATPAF1-212ENST00000542495 TRPC6Q9Y210 931 aa6.47□□□□□ -1.37
ATPAF1-212ENST00000542495 CEP170BQ9Y4F5 1589 aaPredicted RBP6.47□□□□□ -1.37
ATPAF1-212ENST00000542495 TTC21BQ7Z4L5 1316 aa6.47□□□□□ -1.37
ATPAF1-212ENST00000542495 USP6P35125 1406 aa6.47□□□□□ -1.37
ATPAF1-212ENST00000542495 CRB1P82279 1406 aa6.47□□□□□ -1.37
ATPAF1-212ENST00000542495 ELL2O00472 640 aaPredicted RBP6.46□□□□□ -1.37
ATPAF1-212ENST00000542495 TRAK2O60296 914 aa6.46□□□□□ -1.37
ATPAF1-212ENST00000542495 EIF5BO60841 1220 aaKnown RBP6.46□□□□□ -1.37
ATPAF1-212ENST00000542495 RBM26Q5T8P6 1007 aaKnown RBP6.46□□□□□ -1.37
ATPAF1-212ENST00000542495 ILDR2Q71H61 639 aa6.46□□□□□ -1.37
ATPAF1-212ENST00000542495 PLEKHM2Q8IWE5 1019 aa6.46□□□□□ -1.37
ATPAF1-212ENST00000542495 ANKRD44Q8N8A2 993 aa6.46□□□□□ -1.37
ATPAF1-212ENST00000542495 PLEKHG1Q9ULL1 1385 aa6.46□□□□□ -1.38
ATPAF1-212ENST00000542495 DDX11L8A8MPP1 907 aa6.46□□□□□ -1.38
ATPAF1-212ENST00000542495 CDC45O75419 566 aa6.46□□□□□ -1.38
ATPAF1-212ENST00000542495 GSPT1P15170 499 aaKnown RBP6.46□□□□□ -1.38
ATPAF1-212ENST00000542495 MLLT3P42568 568 aaPredicted RBP6.46□□□□□ -1.38
ATPAF1-212ENST00000542495 AEBP1Q8IUX7 1158 aa6.46□□□□□ -1.38
ATPAF1-212ENST00000542495 RPAP2Q8IXW5 612 aaPredicted RBP6.46□□□□□ -1.38
ATPAF1-212ENST00000542495 PTPRCP08575 1304 aa6.46□□□□□ -1.38
ATPAF1-212ENST00000542495 ZNF335Q9H4Z2 1342 aaPredicted RBP6.46□□□□□ -1.38
ATPAF1-212ENST00000542495 UBAP1LF5GYI3 381 aa6.45□□□□□ -1.38
ATPAF1-212ENST00000542495 XRCC6P12956 609 aaKnown RBP eCLIP6.45□□□□□ -1.38
ATPAF1-212ENST00000542495 DCTN1Q14203 1278 aa6.45□□□□□ -1.38
ATPAF1-212ENST00000542495 RAB3GAP1Q15042 981 aa6.45□□□□□ -1.38
ATPAF1-212ENST00000542495 SULT6B1Q6IMI4 303 aa6.45□□□□□ -1.38
ATPAF1-212ENST00000542495 CLEC17AQ6ZS10 378 aa6.45□□□□□ -1.38
ATPAF1-212ENST00000542495 GPIHBP1Q8IV16 184 aa6.45□□□□□ -1.38
ATPAF1-212ENST00000542495 ISY1Q9ULR0 285 aaKnown RBP6.45□□□□□ -1.38
ATPAF1-212ENST00000542495 ACEP12821 1306 aa6.45□□□□□ -1.38
ATPAF1-212ENST00000542495 RTL1A6NKG5 1358 aa6.45□□□□□ -1.38
ATPAF1-212ENST00000542495 ARHGEF10O15013 1369 aa6.45□□□□□ -1.38
ATPAF1-212ENST00000542495 GOLGA6L3A6NEY3 463 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms