RNA–Protein interactions for RNA: ENST00000542362.1

POLE-218, Transcript of DNA polymerase epsilon, catalytic subunit, human

TSL 4

Gene POLE, Length 508 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
POLE-218	ENST00000542362	LAMB4	A4D0S4	1761 aa		12.2	□□□□□ -0.46
POLE-218	ENST00000542362	MYBBP1A	Q9BQG0	1328 aa	Known RBP	12.2	□□□□□ -0.46
POLE-218	ENST00000542362	RNMT	O43148	476 aa	Known RBP	12.2	□□□□□ -0.46
POLE-218	ENST00000542362	AMOT	Q4VCS5	1084 aa		12.2	□□□□□ -0.46
POLE-218	ENST00000542362	C1orf141	Q5JVX7	400 aa		12.2	□□□□□ -0.46
POLE-218	ENST00000542362	CCNL1	Q9UK58	526 aa	Predicted RBP	12.2	□□□□□ -0.46
POLE-218	ENST00000542362	MAP3K5	Q99683	1374 aa		12.19	□□□□□ -0.46
POLE-218	ENST00000542362	PLEKHG2	Q9H7P9	1386 aa		12.19	□□□□□ -0.46
POLE-218	ENST00000542362	SENP3-EIF4A1	A0A087X0R7	540 aa		12.19	□□□□□ -0.46
POLE-218	ENST00000542362	SLC39A6	Q13433	755 aa		12.19	□□□□□ -0.46
POLE-218	ENST00000542362	ITPK1	Q13572	414 aa		12.19	□□□□□ -0.46
POLE-218	ENST00000542362	DCTN1	Q14203	1278 aa		12.19	□□□□□ -0.46
POLE-218	ENST00000542362	SLC15A2	Q16348	729 aa		12.19	□□□□□ -0.46
POLE-218	ENST00000542362	AKAP4	Q5JQC9	854 aa		12.19	□□□□□ -0.46
POLE-218	ENST00000542362	DCAF5	Q96JK2	942 aa		12.19	□□□□□ -0.46
POLE-218	ENST00000542362	RALBP1	Q15311	655 aa		12.18	□□□□□ -0.46
POLE-218	ENST00000542362	CCDC146	Q8IYE0	955 aa		12.18	□□□□□ -0.46
POLE-218	ENST00000542362	NFATC2IP	Q8NCF5	419 aa		12.18	□□□□□ -0.46
POLE-218	ENST00000542362	LINC00116	Q8NCU8	138 aa		12.18	□□□□□ -0.46
POLE-218	ENST00000542362	AKT1S1	Q96B36	256 aa		12.18	□□□□□ -0.46
POLE-218	ENST00000542362	PNPLA7	Q6ZV29	1317 aa		12.17	□□□□□ -0.46
POLE-218	ENST00000542362	ZBTB7A	O95365	584 aa		12.17	□□□□□ -0.46
POLE-218	ENST00000542362	CABP4	P57796	275 aa		12.17	□□□□□ -0.46
POLE-218	ENST00000542362	NBPF14	Q5TI25	921 aa		12.17	□□□□□ -0.46
POLE-218	ENST00000542362	IL17RE	Q8NFR9	667 aa		12.17	□□□□□ -0.46
POLE-218	ENST00000542362	PLEKHF1	Q96S99	279 aa		12.17	□□□□□ -0.46
POLE-218	ENST00000542362	STK32B	Q9NY57	414 aa		12.17	□□□□□ -0.46
POLE-218	ENST00000542362	LOC102724428	A0A0B4J2F2	783 aa		12.16	□□□□□ -0.46
POLE-218	ENST00000542362	SIK1	P57059	783 aa		12.16	□□□□□ -0.46
POLE-218	ENST00000542362	MCM10	Q7L590	875 aa		12.16	□□□□□ -0.46
POLE-218	ENST00000542362	RBM42	Q9BTD8	480 aa	Known RBP	12.16	□□□□□ -0.46
POLE-218	ENST00000542362	SLC52A2	Q9HAB3	445 aa		12.16	□□□□□ -0.46
POLE-218	ENST00000542362	NUDC	Q9Y266	331 aa		12.16	□□□□□ -0.46
POLE-218	ENST00000542362	AFDN	P55196	1824 aa	Known RBP	12.16	□□□□□ -0.46
POLE-218	ENST00000542362	ERVV-2	B6SEH9	535 aa		12.15	□□□□□ -0.46
POLE-218	ENST00000542362	KCNQ3	O43525	872 aa		12.15	□□□□□ -0.46
POLE-218	ENST00000542362	PTCD1	O75127	700 aa	Known RBP	12.15	□□□□□ -0.46
POLE-218	ENST00000542362	THUMPD2	Q9BTF0	503 aa	Known RBP	12.15	□□□□□ -0.46
POLE-218	ENST00000542362	ATF5	Q9Y2D1	282 aa	Predicted RBP	12.15	□□□□□ -0.46
POLE-218	ENST00000542362	BCOR	Q6W2J9	1755 aa		12.15	□□□□□ -0.46
POLE-218	ENST00000542362	HSP90AB1	P08238	724 aa	Known RBP	12.14	□□□□□ -0.47
POLE-218	ENST00000542362	YY1	P25490	414 aa		12.14	□□□□□ -0.47
POLE-218	ENST00000542362	SLC27A3	Q5K4L6	730 aa		12.14	□□□□□ -0.47
POLE-218	ENST00000542362	N4BP2	Q86UW6	1770 aa	Predicted RBP	12.14	□□□□□ -0.47
POLE-218	ENST00000542362	CEMIP	Q8WUJ3	1361 aa		12.14	□□□□□ -0.47
POLE-218	ENST00000542362	KIAA1551	Q9HCM1	1747 aa		12.14	□□□□□ -0.47
POLE-218	ENST00000542362	CACNA1S	Q13698	1873 aa		12.13	□□□□□ -0.47
POLE-218	ENST00000542362	GNAT3	A8MTJ3	354 aa		12.13	□□□□□ -0.47
POLE-218	ENST00000542362	PHF14	O94880	888 aa		12.13	□□□□□ -0.47
POLE-218	ENST00000542362	ATP6V1A	P38606	617 aa		12.13	□□□□□ -0.47
POLE-218	ENST00000542362	COL23A1	Q86Y22	540 aa	Predicted RBP	12.13	□□□□□ -0.47
POLE-218	ENST00000542362	GAS2L2	Q8NHY3	880 aa		12.13	□□□□□ -0.47
POLE-218	ENST00000542362	RRP7A	Q9Y3A4	280 aa	Known RBP	12.13	□□□□□ -0.47
POLE-218	ENST00000542362	SCN7A	Q01118	1682 aa		12.13	□□□□□ -0.47
POLE-218	ENST00000542362	FCHSD2	O94868	740 aa		12.12	□□□□□ -0.47
POLE-218	ENST00000542362	MSL1	Q68DK7	614 aa		12.12	□□□□□ -0.47
POLE-218	ENST00000542362	SMARCC1	Q92922	1105 aa	Predicted RBP	12.12	□□□□□ -0.47
POLE-218	ENST00000542362	PRAMEF22	A3QJZ6	481 aa		12.11	□□□□□ -0.47
POLE-218	ENST00000542362	DNAJC10	Q8IXB1	793 aa		12.11	□□□□□ -0.47
POLE-218	ENST00000542362	MIS18A	Q9NYP9	233 aa		12.11	□□□□□ -0.47
POLE-218	ENST00000542362	TFCP2L1	Q9NZI6	479 aa		12.11	□□□□□ -0.47
POLE-218	ENST00000542362	ADAMTS8	Q9UP79	889 aa		12.11	□□□□□ -0.47
POLE-218	ENST00000542362	NUP98	P52948	1817 aa		12.1	□□□□□ -0.47
POLE-218	ENST00000542362	KIF13B	Q9NQT8	1826 aa		12.1	□□□□□ -0.47
POLE-218	ENST00000542362	PTGER2	P43116	358 aa		12.1	□□□□□ -0.47
POLE-218	ENST00000542362	BRCA1	P38398	1863 aa	Known RBP	12.09	□□□□□ -0.47
POLE-218	ENST00000542362	GNPAT	O15228	680 aa		12.09	□□□□□ -0.47
POLE-218	ENST00000542362	MSH5	O43196	834 aa		12.09	□□□□□ -0.47
POLE-218	ENST00000542362	NEUROD2	Q15784	382 aa		12.09	□□□□□ -0.47
POLE-218	ENST00000542362	NFE2L2	Q16236	605 aa		12.09	□□□□□ -0.47
POLE-218	ENST00000542362	AK7	Q96M32	723 aa		12.09	□□□□□ -0.47
POLE-218	ENST00000542362	SGIP1	Q9BQI5	828 aa		12.09	□□□□□ -0.47
POLE-218	ENST00000542362	PIP4K2A	P48426	406 aa	Predicted RBP	12.08	□□□□□ -0.48
POLE-218	ENST00000542362	TEF	Q10587	303 aa		12.08	□□□□□ -0.48
POLE-218	ENST00000542362	ZNF496	Q96IT1	587 aa	Predicted RBP	12.08	□□□□□ -0.48
POLE-218	ENST00000542362	ANKRD31	Q8N7Z5	1873 aa		12.08	□□□□□ -0.48
POLE-218	ENST00000542362	MAPK8IP3	Q9UPT6	1336 aa		12.08	□□□□□ -0.48
POLE-218	ENST00000542362	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	12.07	□□□□□ -0.48
POLE-218	ENST00000542362	CRKL	P46109	303 aa	Known RBP	12.07	□□□□□ -0.48
POLE-218	ENST00000542362	WDR43	Q15061	677 aa	Known RBP eCLIP	12.07	□□□□□ -0.48
POLE-218	ENST00000542362	SPON1	Q9HCB6	807 aa		12.07	□□□□□ -0.48
POLE-218	ENST00000542362	HEG1	Q9ULI3	1381 aa		12.06	□□□□□ -0.48
POLE-218	ENST00000542362	TMPO	P42166	694 aa	Known RBP	12.06	□□□□□ -0.48
POLE-218	ENST00000542362	ZNF790	Q6PG37	636 aa		12.06	□□□□□ -0.48
POLE-218	ENST00000542362	ZBTB1	Q9Y2K1	713 aa		12.06	□□□□□ -0.48
POLE-218	ENST00000542362	UTRN	P46939	3433 aa		12.05	□□□□□ -0.48
POLE-218	ENST00000542362	ANKRD36C	Q5JPF3	1778 aa		12.05	□□□□□ -0.48
POLE-218	ENST00000542362	BTBD11	A6QL63	1104 aa		12.05	□□□□□ -0.48
POLE-218	ENST00000542362	ANP32C	O43423	234 aa		12.05	□□□□□ -0.48
POLE-218	ENST00000542362	RIPK4	P57078	832 aa		12.05	□□□□□ -0.48
POLE-218	ENST00000542362	INTS5	Q6P9B9	1019 aa	Known RBP	12.05	□□□□□ -0.48
POLE-218	ENST00000542362	MTFR1L	Q9H019	292 aa		12.05	□□□□□ -0.48
POLE-218	ENST00000542362	SRP68	Q9UHB9	627 aa	Known RBP	12.05	□□□□□ -0.48
POLE-218	ENST00000542362	GOLGB1	Q14789	3259 aa	Known RBP	12.05	□□□□□ -0.48
POLE-218	ENST00000542362	NRXN2	Q9P2S2	1712 aa		12.05	□□□□□ -0.48
POLE-218	ENST00000542362	CNTNAP4	Q9C0A0	1308 aa		12.05	□□□□□ -0.48
POLE-218	ENST00000542362	COL11A2	P13942	1736 aa	Predicted RBP	12.04	□□□□□ -0.48
POLE-218	ENST00000542362	CYP19A1	P11511	503 aa	Predicted RBP	12.04	□□□□□ -0.48
POLE-218	ENST00000542362	RTF1	Q92541	710 aa	Known RBP	12.04	□□□□□ -0.48
POLE-218	ENST00000542362	MRS2	Q9HD23	443 aa		12.04	□□□□□ -0.48

Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms