RNA–Protein interactions for RNA: ENST00000541970.5

PDCD2-208, Transcript of programmed cell death 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDCD2, Length 3,378 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD2-208ENST00000541970 MTHFSDQ2M296 383 aaKnown RBP20.3■□□□□ 0.84
PDCD2-208ENST00000541970 ALDH1L2Q3SY69 923 aa20.3■□□□□ 0.84
PDCD2-208ENST00000541970 CGNQ9P2M7 1197 aaKnown RBP20.3■□□□□ 0.84
PDCD2-208ENST00000541970 ARHGEF40Q8TER5 1519 aa20.3■□□□□ 0.84
PDCD2-208ENST00000541970 TMEM131LA2VDJ0 1609 aa20.3■□□□□ 0.84
PDCD2-208ENST00000541970 MYRIPQ8NFW9 859 aa20.29■□□□□ 0.84
PDCD2-208ENST00000541970 TSPY26PQ9H489 355 aa20.29■□□□□ 0.84
PDCD2-208ENST00000541970 KIF3AQ9Y496 699 aa20.29■□□□□ 0.84
PDCD2-208ENST00000541970 EDC4Q6P2E9 1401 aaKnown RBP20.29■□□□□ 0.84
PDCD2-208ENST00000541970 ST18O60284 1047 aa20.29■□□□□ 0.84
PDCD2-208ENST00000541970 MCM5P33992 734 aa20.29■□□□□ 0.84
PDCD2-208ENST00000541970 TSHZ3Q63HK5 1081 aa20.29■□□□□ 0.84
PDCD2-208ENST00000541970 IBTKQ9P2D0 1353 aaPredicted RBP20.28■□□□□ 0.84
PDCD2-208ENST00000541970 PDCL2Q8N4E4 241 aa20.28■□□□□ 0.84
PDCD2-208ENST00000541970 CHMP4BQ9H444 224 aaKnown RBP20.28■□□□□ 0.84
PDCD2-208ENST00000541970 IQSEC2Q5JU85 1478 aa20.27■□□□□ 0.84
PDCD2-208ENST00000541970 ZBTB7BO15156 539 aaPredicted RBP20.27■□□□□ 0.84
PDCD2-208ENST00000541970 CDK11BP21127 795 aaKnown RBP20.27■□□□□ 0.84
PDCD2-208ENST00000541970 MEIS3Q99687 375 aa20.27■□□□□ 0.84
PDCD2-208ENST00000541970 G2E3Q7L622 706 aa20.27■□□□□ 0.84
PDCD2-208ENST00000541970 EYA1Q99502 592 aa20.27■□□□□ 0.84
PDCD2-208ENST00000541970 NOLC1Q14978 699 aaKnown RBP eCLIP20.26■□□□□ 0.83
PDCD2-208ENST00000541970 U2AF2P26368 475 aaKnown RBP eCLIP20.26■□□□□ 0.831e-6■■■■■ 27
PDCD2-208ENST00000541970 ZNF710Q8N1W2 664 aa20.26■□□□□ 0.83
PDCD2-208ENST00000541970 ANXA1P04083 346 aa20.25■□□□□ 0.83
PDCD2-208ENST00000541970 UTP14CQ5TAP6 766 aaKnown RBP20.25■□□□□ 0.83
PDCD2-208ENST00000541970 EXOC6BQ9Y2D4 811 aa20.25■□□□□ 0.83
PDCD2-208ENST00000541970 CHAF1AQ13111 956 aaPredicted RBP20.25■□□□□ 0.83
PDCD2-208ENST00000541970 OTUD7AQ8TE49 926 aaPredicted RBP20.25■□□□□ 0.83
PDCD2-208ENST00000541970 HMGN5P82970 282 aaKnown RBP20.24■□□□□ 0.83
PDCD2-208ENST00000541970 MYO3AQ8NEV4 1616 aa20.24■□□□□ 0.83
PDCD2-208ENST00000541970 NEURL4Q96JN8 1562 aa20.24■□□□□ 0.83
PDCD2-208ENST00000541970 ZBTB22O15209 634 aa20.23■□□□□ 0.83
PDCD2-208ENST00000541970 SPC24Q8NBT2 197 aa20.23■□□□□ 0.83
PDCD2-208ENST00000541970 SHPRHQ149N8 1683 aa20.22■□□□□ 0.83
PDCD2-208ENST00000541970 DIP2BQ9P265 1576 aa20.22■□□□□ 0.83
PDCD2-208ENST00000541970 TRIM6-TRIM34B2RNG4 842 aa20.22■□□□□ 0.83
PDCD2-208ENST00000541970 BCL2L12Q9HB09 334 aa20.22■□□□□ 0.83
PDCD2-208ENST00000541970 CPS1P31327 1500 aa20.22■□□□□ 0.83
PDCD2-208ENST00000541970 LRRC7Q96NW7 1537 aa20.22■□□□□ 0.83
PDCD2-208ENST00000541970 NEK4P51957 841 aa20.21■□□□□ 0.83
PDCD2-208ENST00000541970 RILPL2Q969X0 211 aa20.21■□□□□ 0.83
PDCD2-208ENST00000541970 CASC1Q6TDU7 716 aa20.21■□□□□ 0.83
PDCD2-208ENST00000541970 GCC1Q96CN9 775 aa20.21■□□□□ 0.83
PDCD2-208ENST00000541970 MBD3O95983 291 aa20.2■□□□□ 0.82
PDCD2-208ENST00000541970 SYAP1Q96A49 352 aaPredicted RBP20.2■□□□□ 0.82
PDCD2-208ENST00000541970 LRRC59Q96AG4 307 aaKnown RBP20.2■□□□□ 0.82
PDCD2-208ENST00000541970 GTPBP4Q9BZE4 634 aaKnown RBP20.2■□□□□ 0.82
PDCD2-208ENST00000541970 GSPT1P15170 499 aaKnown RBP20.2■□□□□ 0.82
PDCD2-208ENST00000541970 PNPLA6Q8IY17 1366 aa20.2■□□□□ 0.82
PDCD2-208ENST00000541970 PLCD3Q8N3E9 789 aa20.2■□□□□ 0.82
PDCD2-208ENST00000541970 ZDHHC9Q9Y397 364 aa20.2■□□□□ 0.82
PDCD2-208ENST00000541970 ADCY5O95622 1261 aa20.19■□□□□ 0.82
PDCD2-208ENST00000541970 ZC3H6P61129 1189 aaKnown RBP20.19■□□□□ 0.82
PDCD2-208ENST00000541970 CWC22Q9HCG8 908 aaKnown RBP20.19■□□□□ 0.82
PDCD2-208ENST00000541970 SETD1BQ9UPS6 1966 aaKnown RBP20.19■□□□□ 0.82
PDCD2-208ENST00000541970 HAP1P54257 671 aaPredicted RBP20.19■□□□□ 0.82
PDCD2-208ENST00000541970 SIRT2Q8IXJ6 389 aa20.19■□□□□ 0.82
PDCD2-208ENST00000541970 PRIMPOLQ96LW4 560 aa20.19■□□□□ 0.82
PDCD2-208ENST00000541970 FAM135BQ49AJ0 1406 aa20.19■□□□□ 0.82
PDCD2-208ENST00000541970 GTF2E1P29083 439 aaPredicted RBP20.18■□□□□ 0.82
PDCD2-208ENST00000541970 OS9Q13438 667 aaPredicted RBP20.18■□□□□ 0.82
PDCD2-208ENST00000541970 CLEC17AQ6ZS10 378 aa20.18■□□□□ 0.82
PDCD2-208ENST00000541970 HCLS1P14317 486 aaPredicted RBP20.18■□□□□ 0.82
PDCD2-208ENST00000541970 TEFQ10587 303 aa20.18■□□□□ 0.82
PDCD2-208ENST00000541970 PHF8Q9UPP1 1060 aa20.18■□□□□ 0.82
PDCD2-208ENST00000541970 LETM1O95202 739 aaPredicted RBP20.17■□□□□ 0.82
PDCD2-208ENST00000541970 INTS3Q68E01 1043 aaKnown RBP20.17■□□□□ 0.82
PDCD2-208ENST00000541970 MPRIPQ6WCQ1 1025 aa20.17■□□□□ 0.82
PDCD2-208ENST00000541970 KIF20AO95235 890 aa20.17■□□□□ 0.82
PDCD2-208ENST00000541970 ANKLE2Q86XL3 938 aa20.17■□□□□ 0.82
PDCD2-208ENST00000541970 GADD45BO75293 160 aaPredicted RBP20.16■□□□□ 0.82
PDCD2-208ENST00000541970 MAP4K4O95819 1239 aaPredicted RBP20.16■□□□□ 0.82
PDCD2-208ENST00000541970 CSB-PGBD3P0DP91 1061 aa20.16■□□□□ 0.82
PDCD2-208ENST00000541970 HDGFL1Q5TGJ6 251 aa20.16■□□□□ 0.82
PDCD2-208ENST00000541970 PIBF1Q8WXW3 757 aa20.16■□□□□ 0.82
PDCD2-208ENST00000541970 IL1RAPL2Q9NP60 686 aa20.16■□□□□ 0.82
PDCD2-208ENST00000541970 ATP7BP35670 1465 aa20.15■□□□□ 0.82
PDCD2-208ENST00000541970 AIMP1Q12904 312 aaKnown RBP20.15■□□□□ 0.82
PDCD2-208ENST00000541970 USP26Q9BXU7 913 aa20.15■□□□□ 0.82
PDCD2-208ENST00000541970 GNAT3A8MTJ3 354 aa20.15■□□□□ 0.82
PDCD2-208ENST00000541970 PLEKHG3A1L390 1219 aa20.15■□□□□ 0.82
PDCD2-208ENST00000541970 NAP1L2Q9ULW6 460 aaPredicted RBP20.15■□□□□ 0.82
PDCD2-208ENST00000541970 RIOK3O14730 519 aaKnown RBP20.14■□□□□ 0.82
PDCD2-208ENST00000541970 CYP2E1P05181 493 aaPredicted RBP20.14■□□□□ 0.82
PDCD2-208ENST00000541970 ORAI2Q96SN7 254 aa20.14■□□□□ 0.81
PDCD2-208ENST00000541970 COL3A1P02461 1466 aaPredicted RBP20.14■□□□□ 0.81
PDCD2-208ENST00000541970 MAP2P11137 1827 aaKnown RBP20.14■□□□□ 0.81
PDCD2-208ENST00000541970 HMMRO75330 724 aa20.14■□□□□ 0.81
PDCD2-208ENST00000541970 CPSF1Q10570 1443 aaKnown RBP20.13■□□□□ 0.81
PDCD2-208ENST00000541970 CHL1O00533 1208 aa20.13■□□□□ 0.81
PDCD2-208ENST00000541970 DTNBO60941 627 aa20.13■□□□□ 0.81
PDCD2-208ENST00000541970 ZNF853P0CG23 659 aa20.13■□□□□ 0.81
PDCD2-208ENST00000541970 TBX22Q9Y458 520 aa20.13■□□□□ 0.81
PDCD2-208ENST00000541970 PHF14O94880 888 aa20.12■□□□□ 0.81
PDCD2-208ENST00000541970 PLEKHM2Q8IWE5 1019 aa20.12■□□□□ 0.81
PDCD2-208ENST00000541970 DDX17Q92841 729 aaKnown RBP20.12■□□□□ 0.81
PDCD2-208ENST00000541970 ZNF530Q6P9A1 599 aaPredicted RBP20.12■□□□□ 0.81
PDCD2-208ENST00000541970 CHMP3Q9Y3E7 222 aa20.12■□□□□ 0.81
PDCD2-208ENST00000541970 MSH6P52701 1360 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms