RNA–Protein interactions for RNA: ENST00000541888.2

AC005840.3-201, humanhuman

TSL 5 BASIC

Gene AC005840.3, Length 1,803 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC005840.3-201ENST00000541888 PEAK1Q9H792 1746 aa10.3□□□□□ -0.76
AC005840.3-201ENST00000541888 SSH2Q76I76 1423 aa10.3□□□□□ -0.76
AC005840.3-201ENST00000541888 NSD2O96028 1365 aa10.3□□□□□ -0.76
AC005840.3-201ENST00000541888 GRXCR2A6NFK2 248 aa10.3□□□□□ -0.76
AC005840.3-201ENST00000541888 HAP1P54257 671 aaPredicted RBP10.3□□□□□ -0.76
AC005840.3-201ENST00000541888 ABTB2Q8N961 1025 aa10.3□□□□□ -0.76
AC005840.3-201ENST00000541888 POLKQ9UBT6 870 aa10.3□□□□□ -0.76
AC005840.3-201ENST00000541888 MSH6P52701 1360 aa10.29□□□□□ -0.76
AC005840.3-201ENST00000541888 U2SURPO15042 1029 aaKnown RBP10.29□□□□□ -0.76
AC005840.3-201ENST00000541888 OVOS2A0A0J9YW53 1432 aa10.29□□□□□ -0.76
AC005840.3-201ENST00000541888 OVOS2Q6IE36 1432 aa10.29□□□□□ -0.76
AC005840.3-201ENST00000541888 BHMG1C9JSJ3 638 aaPredicted RBP10.28□□□□□ -0.76
AC005840.3-201ENST00000541888 EN1Q05925 392 aaPredicted RBP10.28□□□□□ -0.76
AC005840.3-201ENST00000541888 RRP7AQ9Y3A4 280 aaKnown RBP10.28□□□□□ -0.76
AC005840.3-201ENST00000541888 COL3A1P02461 1466 aaPredicted RBP10.28□□□□□ -0.76
AC005840.3-201ENST00000541888 NEUROD2Q15784 382 aa10.28□□□□□ -0.76
AC005840.3-201ENST00000541888 LTN1O94822 1766 aa10.27□□□□□ -0.76
AC005840.3-201ENST00000541888 TRPM3Q9HCF6 1732 aaPredicted RBP10.27□□□□□ -0.77
AC005840.3-201ENST00000541888 PRIM1P49642 420 aaKnown RBP10.27□□□□□ -0.77
AC005840.3-201ENST00000541888 PROX2Q3B8N5 592 aa10.27□□□□□ -0.77
AC005840.3-201ENST00000541888 HMOX1P09601 288 aa10.26□□□□□ -0.77
AC005840.3-201ENST00000541888 U2AF1L5P0DN76 240 aaPredicted RBP10.26□□□□□ -0.77
AC005840.3-201ENST00000541888 U2AF1Q01081 240 aaKnown RBP eCLIP10.26□□□□□ -0.77
AC005840.3-201ENST00000541888 TSR1Q2NL82 804 aaKnown RBP10.26□□□□□ -0.77
AC005840.3-201ENST00000541888 KRT28Q7Z3Y7 464 aa10.26□□□□□ -0.77
AC005840.3-201ENST00000541888 CABLES1Q8TDN4 633 aa10.26□□□□□ -0.77
AC005840.3-201ENST00000541888 BLMP54132 1417 aaPredicted RBP10.26□□□□□ -0.77
AC005840.3-201ENST00000541888 MAP3K7O43318 606 aa10.26□□□□□ -0.77
AC005840.3-201ENST00000541888 HSP90AB2PQ58FF8 381 aa10.26□□□□□ -0.77
AC005840.3-201ENST00000541888 CDCA7LQ96GN5 454 aa10.26□□□□□ -0.77
AC005840.3-201ENST00000541888 ANP32EQ9BTT0 268 aa10.26□□□□□ -0.77
AC005840.3-201ENST00000541888 APAF1O14727 1248 aa10.25□□□□□ -0.77
AC005840.3-201ENST00000541888 OSBPP22059 807 aa10.25□□□□□ -0.77
AC005840.3-201ENST00000541888 BRINP3Q76B58 766 aa10.25□□□□□ -0.77
AC005840.3-201ENST00000541888 CFAP53Q96M91 514 aa10.25□□□□□ -0.77
AC005840.3-201ENST00000541888 KIF1AQ12756 1690 aa10.25□□□□□ -0.77
AC005840.3-201ENST00000541888 MAP3K19Q56UN5 1328 aa10.25□□□□□ -0.77
AC005840.3-201ENST00000541888 ZBED9Q6R2W3 1325 aa10.25□□□□□ -0.77
AC005840.3-201ENST00000541888 RGPD5Q99666 1765 aa10.24□□□□□ -0.77
AC005840.3-201ENST00000541888 LTV1Q96GA3 475 aaPredicted RBP10.24□□□□□ -0.77
AC005840.3-201ENST00000541888 SLAIN2Q9P270 581 aa10.24□□□□□ -0.77
AC005840.3-201ENST00000541888 TTC21AQ8NDW8 1320 aa10.24□□□□□ -0.77
AC005840.3-201ENST00000541888 RGPD2P0DJD1 1756 aa10.24□□□□□ -0.77
AC005840.3-201ENST00000541888 LTBP4Q8N2S1 1624 aa10.23□□□□□ -0.77
AC005840.3-201ENST00000541888 DIAPH1O60610 1272 aaKnown RBP10.23□□□□□ -0.77
AC005840.3-201ENST00000541888 DCCP43146 1447 aa10.23□□□□□ -0.77
AC005840.3-201ENST00000541888 ALS2Q96Q42 1657 aa10.23□□□□□ -0.77
AC005840.3-201ENST00000541888 IRX6P78412 446 aaPredicted RBP10.22□□□□□ -0.77
AC005840.3-201ENST00000541888 AEBP1Q8IUX7 1158 aa10.22□□□□□ -0.77
AC005840.3-201ENST00000541888 RABGEF1Q9UJ41 708 aa10.22□□□□□ -0.77
AC005840.3-201ENST00000541888 MRPL50Q8N5N7 158 aaKnown RBP10.21□□□□□ -0.77
AC005840.3-201ENST00000541888 KCTD12Q96CX2 325 aaKnown RBP10.21□□□□□ -0.77
AC005840.3-201ENST00000541888 PXDNQ92626 1479 aa10.21□□□□□ -0.77
AC005840.3-201ENST00000541888 CDK12Q9NYV4 1490 aaPredicted RBP10.21□□□□□ -0.77
AC005840.3-201ENST00000541888 USP31Q70CQ4 1352 aa10.21□□□□□ -0.78
AC005840.3-201ENST00000541888 PNPLA6Q8IY17 1366 aa10.21□□□□□ -0.78
AC005840.3-201ENST00000541888 MED1Q15648 1581 aaPredicted RBP10.21□□□□□ -0.78
AC005840.3-201ENST00000541888 MLLT3P42568 568 aaPredicted RBP10.21□□□□□ -0.78
AC005840.3-201ENST00000541888 AMPHP49418 695 aa10.21□□□□□ -0.78
AC005840.3-201ENST00000541888 ZC3H6P61129 1189 aaKnown RBP10.21□□□□□ -0.78
AC005840.3-201ENST00000541888 EIF4A2Q14240 407 aaKnown RBP10.21□□□□□ -0.78
AC005840.3-201ENST00000541888 USHBP1Q8N6Y0 703 aa10.21□□□□□ -0.78
AC005840.3-201ENST00000541888 KIAA1468Q9P260 1216 aa10.21□□□□□ -0.78
AC005840.3-201ENST00000541888 ROBO1Q9Y6N7 1651 aa10.21□□□□□ -0.78
AC005840.3-201ENST00000541888 NFAT5O94916 1531 aa10.2□□□□□ -0.78
AC005840.3-201ENST00000541888 AATKQ6ZMQ8 1374 aa10.2□□□□□ -0.78
AC005840.3-201ENST00000541888 SMG6Q86US8 1419 aaKnown RBP10.2□□□□□ -0.78
AC005840.3-201ENST00000541888 ONECUT3O60422 494 aaPredicted RBP10.2□□□□□ -0.78
AC005840.3-201ENST00000541888 IL13P35225 146 aa10.2□□□□□ -0.78
AC005840.3-201ENST00000541888 PIP4K2BP78356 416 aa10.2□□□□□ -0.78
AC005840.3-201ENST00000541888 TCP11L2Q8N4U5 519 aa10.2□□□□□ -0.78
AC005840.3-201ENST00000541888 NCOA3Q9Y6Q9 1424 aa10.2□□□□□ -0.78
AC005840.3-201ENST00000541888 USP54Q70EL1 1684 aa10.19□□□□□ -0.78
AC005840.3-201ENST00000541888 PRKAR2BP31323 418 aa10.19□□□□□ -0.78
AC005840.3-201ENST00000541888 PHACTR3Q96KR7 559 aa10.19□□□□□ -0.78
AC005840.3-201ENST00000541888 NBPF3Q9H094 633 aa10.19□□□□□ -0.78
AC005840.3-201ENST00000541888 PHRF1Q9P1Y6 1649 aaKnown RBP10.19□□□□□ -0.78
AC005840.3-201ENST00000541888 DLG5Q8TDM6 1919 aa10.19□□□□□ -0.78
AC005840.3-201ENST00000541888 IQSEC2Q5JU85 1478 aa10.19□□□□□ -0.78
AC005840.3-201ENST00000541888 TRIM6-TRIM34B2RNG4 842 aa10.19□□□□□ -0.78
AC005840.3-201ENST00000541888 BCL11AQ9H165 835 aa10.19□□□□□ -0.78
AC005840.3-201ENST00000541888 HCSTQ9UBK5 93 aa10.19□□□□□ -0.78
AC005840.3-201ENST00000541888 SUPT16HQ9Y5B9 1047 aaKnown RBP10.19□□□□□ -0.78
AC005840.3-201ENST00000541888 GCP02774 474 aa10.18□□□□□ -0.78
AC005840.3-201ENST00000541888 HOXC9P31274 260 aa10.18□□□□□ -0.78
AC005840.3-201ENST00000541888 CHRNA2Q15822 529 aa10.18□□□□□ -0.78
AC005840.3-201ENST00000541888 NPHP3Q7Z494 1330 aa10.18□□□□□ -0.78
AC005840.3-201ENST00000541888 CRYBG1Q9Y4K1 1723 aa10.17□□□□□ -0.78
AC005840.3-201ENST00000541888 GOLGA8CPA6NN73 597 aa10.17□□□□□ -0.78
AC005840.3-201ENST00000541888 SULT6B1Q6IMI4 303 aa10.17□□□□□ -0.78
AC005840.3-201ENST00000541888 LRRC59Q96AG4 307 aaKnown RBP10.17□□□□□ -0.78
AC005840.3-201ENST00000541888 RUNDC1Q96C34 613 aa10.17□□□□□ -0.78
AC005840.3-201ENST00000541888 PLEKHF1Q96S99 279 aa10.17□□□□□ -0.78
AC005840.3-201ENST00000541888 RSPH6AQ9H0K4 717 aa10.17□□□□□ -0.78
AC005840.3-201ENST00000541888 NUDCQ9Y266 331 aa10.17□□□□□ -0.78
AC005840.3-201ENST00000541888 TNS3Q68CZ2 1445 aa10.17□□□□□ -0.78
AC005840.3-201ENST00000541888 RGPD1P0DJD0 1748 aa10.17□□□□□ -0.78
AC005840.3-201ENST00000541888 THUMPD2Q9BTF0 503 aaKnown RBP10.17□□□□□ -0.78
AC005840.3-201ENST00000541888 CDHR5Q9HBB8 845 aa10.17□□□□□ -0.78
AC005840.3-201ENST00000541888 SBNO1A3KN83 1393 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms