RNA–Protein interactions for RNA: ENST00000540815.2

LGR5-203, Transcript of leucine rich repeat containing G protein-coupled receptor 5, humanhuman

TSL 1 (best) BASIC

Gene LGR5, Length 2,800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LGR5-203ENST00000540815 MED1Q15648 1581 aaPredicted RBP14.06□□□□□ -0.16
LGR5-203ENST00000540815 RBM25P49756 843 aaKnown RBP14.06□□□□□ -0.16
LGR5-203ENST00000540815 TRPM3Q9HCF6 1732 aaPredicted RBP14.06□□□□□ -0.16
LGR5-203ENST00000540815 KIF1AQ12756 1690 aa14.05□□□□□ -0.16
LGR5-203ENST00000540815 LMO7Q8WWI1 1683 aa14.05□□□□□ -0.16
LGR5-203ENST00000540815 GOLGA6L3A6NEY3 463 aa14.05□□□□□ -0.16
LGR5-203ENST00000540815 F6X3S4 739 aa14.05□□□□□ -0.16
LGR5-203ENST00000540815 CEMIPQ8WUJ3 1361 aa14.05□□□□□ -0.16
LGR5-203ENST00000540815 PLEKHM2Q8IWE5 1019 aa14.04□□□□□ -0.16
LGR5-203ENST00000540815 ANTXR1Q9H6X2 564 aa14.04□□□□□ -0.16
LGR5-203ENST00000540815 KDM3BQ7LBC6 1761 aa14.04□□□□□ -0.16
LGR5-203ENST00000540815 RBM10P98175 930 aaKnown RBP14.03□□□□□ -0.16
LGR5-203ENST00000540815 LRRC59Q96AG4 307 aaKnown RBP14.03□□□□□ -0.16
LGR5-203ENST00000540815 NCAPD2Q15021 1401 aa14.03□□□□□ -0.16
LGR5-203ENST00000540815 RRP9O43818 475 aaKnown RBP14.03□□□□□ -0.16
LGR5-203ENST00000540815 FLIIQ13045 1269 aa14.03□□□□□ -0.16
LGR5-203ENST00000540815 SLC4A10Q6U841 1118 aa14.03□□□□□ -0.16
LGR5-203ENST00000540815 CAMTA1Q9Y6Y1 1673 aa14.03□□□□□ -0.16
LGR5-203ENST00000540815 PXDNLA1KZ92 1463 aa14.03□□□□□ -0.16
LGR5-203ENST00000540815 ZBTB7CA1YPR0 619 aa14.02□□□□□ -0.16
LGR5-203ENST00000540815 TBC1D9Q6ZT07 1266 aa14.02□□□□□ -0.16
LGR5-203ENST00000540815 HMMRO75330 724 aa14.02□□□□□ -0.17
LGR5-203ENST00000540815 GCP02774 474 aa14.02□□□□□ -0.17
LGR5-203ENST00000540815 L1TD1Q5T7N2 865 aaKnown RBP14.02□□□□□ -0.17
LGR5-203ENST00000540815 ARHGEF25Q86VW2 580 aa14.02□□□□□ -0.17
LGR5-203ENST00000540815 C1orf167Q5SNV9 1468 aa14.02□□□□□ -0.17
LGR5-203ENST00000540815 CDC45O75419 566 aa14.01□□□□□ -0.17
LGR5-203ENST00000540815 GSPT1P15170 499 aaKnown RBP14.01□□□□□ -0.17
LGR5-203ENST00000540815 CLCN1P35523 988 aa14.01□□□□□ -0.17
LGR5-203ENST00000540815 TTC22Q5TAA0 569 aa14.01□□□□□ -0.17
LGR5-203ENST00000540815 PROSER2Q86WR7 435 aaPredicted RBP14.01□□□□□ -0.17
LGR5-203ENST00000540815 NECTIN2Q92692 538 aa14.01□□□□□ -0.17
LGR5-203ENST00000540815 LGR6Q9HBX8 967 aa14.01□□□□□ -0.17
LGR5-203ENST00000540815 MST1RQ04912 1400 aa14.01□□□□□ -0.17
LGR5-203ENST00000540815 GNAI2P04899 355 aa14□□□□□ -0.17
LGR5-203ENST00000540815 FKBP5Q13451 457 aaPredicted RBP14□□□□□ -0.17
LGR5-203ENST00000540815 C16orf71Q8IYS4 520 aaPredicted RBP14□□□□□ -0.17
LGR5-203ENST00000540815 STRCP1A6NGW2 1772 aa14□□□□□ -0.17
LGR5-203ENST00000540815 SNX21Q969T3 373 aa14□□□□□ -0.17
LGR5-203ENST00000540815 PXDNQ92626 1479 aa13.99□□□□□ -0.17
LGR5-203ENST00000540815 AKAP4Q5JQC9 854 aa13.99□□□□□ -0.17
LGR5-203ENST00000540815 HSCBQ8IWL3 235 aa13.99□□□□□ -0.17
LGR5-203ENST00000540815 OTUD7AQ8TE49 926 aaPredicted RBP13.99□□□□□ -0.17
LGR5-203ENST00000540815 GNAI3P08754 354 aa13.99□□□□□ -0.17
LGR5-203ENST00000540815 PLEKHO1Q53GL0 409 aaPredicted RBP13.99□□□□□ -0.17
LGR5-203ENST00000540815 AXIN2Q9Y2T1 843 aa13.99□□□□□ -0.17
LGR5-203ENST00000540815 ALS2Q96Q42 1657 aa13.99□□□□□ -0.17
LGR5-203ENST00000540815 OVOS2A0A0G2JMS6 1433 aa13.98□□□□□ -0.17
LGR5-203ENST00000540815 HOXB7P09629 217 aa13.98□□□□□ -0.17
LGR5-203ENST00000540815 AMOTQ4VCS5 1084 aa13.98□□□□□ -0.17
LGR5-203ENST00000540815 KRT28Q7Z3Y7 464 aa13.98□□□□□ -0.17
LGR5-203ENST00000540815 HDGFL1Q5TGJ6 251 aa13.98□□□□□ -0.17
LGR5-203ENST00000540815 RGPD5Q99666 1765 aa13.98□□□□□ -0.17
LGR5-203ENST00000540815 KCNQ3O43525 872 aa13.97□□□□□ -0.17
LGR5-203ENST00000540815 EIF4A1P60842 406 aaKnown RBP13.97□□□□□ -0.17
LGR5-203ENST00000540815 C19orf44Q9H6X5 657 aa13.97□□□□□ -0.17
LGR5-203ENST00000540815 SMARCA5O60264 1052 aaPredicted RBP13.97□□□□□ -0.17
LGR5-203ENST00000540815 LMOD2Q6P5Q4 547 aa13.97□□□□□ -0.17
LGR5-203ENST00000540815 ZNF530Q6P9A1 599 aaPredicted RBP13.97□□□□□ -0.17
LGR5-203ENST00000540815 CHMP4AQ9BY43 222 aa13.97□□□□□ -0.17
LGR5-203ENST00000540815 LMTK3Q96Q04 1460 aa13.97□□□□□ -0.17
LGR5-203ENST00000540815 ANKRD24Q8TF21 1146 aa13.96□□□□□ -0.17
LGR5-203ENST00000540815 KIF2CQ99661 725 aa13.96□□□□□ -0.17
LGR5-203ENST00000540815 NCOA3Q9Y6Q9 1424 aa13.96□□□□□ -0.17
LGR5-203ENST00000540815 ESPNB1AK53 854 aa13.96□□□□□ -0.18
LGR5-203ENST00000540815 ATP8B2P98198 1209 aa13.95□□□□□ -0.18
LGR5-203ENST00000540815 DDX17Q92841 729 aaKnown RBP13.95□□□□□ -0.18
LGR5-203ENST00000540815 OSBPL3Q9H4L5 887 aa13.95□□□□□ -0.18
LGR5-203ENST00000540815 SIPA1L3O60292 1781 aaPredicted RBP13.95□□□□□ -0.18
LGR5-203ENST00000540815 APBB1O00213 710 aa13.95□□□□□ -0.18
LGR5-203ENST00000540815 TRAK2O60296 914 aa13.95□□□□□ -0.18
LGR5-203ENST00000540815 TEFQ10587 303 aa13.95□□□□□ -0.18
LGR5-203ENST00000540815 PHAXQ9H814 394 aaKnown RBP13.95□□□□□ -0.18
LGR5-203ENST00000540815 MPRIPQ6WCQ1 1025 aa13.94□□□□□ -0.18
LGR5-203ENST00000540815 CHMP5Q9NZZ3 219 aa13.94□□□□□ -0.18
LGR5-203ENST00000540815 ADAMTS7Q9UKP4 1686 aa13.94□□□□□ -0.18
LGR5-203ENST00000540815 TMEM94Q12767 1356 aa13.94□□□□□ -0.18
LGR5-203ENST00000540815 BTBD11A6QL63 1104 aa13.94□□□□□ -0.18
LGR5-203ENST00000540815 RNMTO43148 476 aaKnown RBP13.94□□□□□ -0.18
LGR5-203ENST00000540815 SDSP20132 328 aa13.94□□□□□ -0.18
LGR5-203ENST00000540815 MCM4P33991 863 aa13.94□□□□□ -0.18
LGR5-203ENST00000540815 C1orf141Q5JVX7 400 aa13.94□□□□□ -0.18
LGR5-203ENST00000540815 TUBGCP6Q96RT7 1819 aa13.94□□□□□ -0.18
LGR5-203ENST00000540815 DCCP43146 1447 aa13.94□□□□□ -0.18
LGR5-203ENST00000540815 FSD2A1L4K1 749 aa13.93□□□□□ -0.18
LGR5-203ENST00000540815 USP44Q9H0E7 712 aa13.93□□□□□ -0.18
LGR5-203ENST00000540815 CASC1Q6TDU7 716 aa13.92□□□□□ -0.18
LGR5-203ENST00000540815 GAS2L3Q86XJ1 694 aa13.92□□□□□ -0.18
LGR5-203ENST00000540815 IBTKQ9P2D0 1353 aaPredicted RBP13.92□□□□□ -0.18
LGR5-203ENST00000540815 PNMA6EA0A0J9YXQ4 647 aa13.92□□□□□ -0.18
LGR5-203ENST00000540815 LRRFIP2Q9Y608 721 aaKnown RBP13.92□□□□□ -0.18
LGR5-203ENST00000540815 SALL3Q9BXA9 1300 aa13.91□□□□□ -0.18
LGR5-203ENST00000540815 UBTFL1P0CB47 393 aaPredicted RBP13.91□□□□□ -0.18
LGR5-203ENST00000540815 EIF2S2P20042 333 aaKnown RBP13.91□□□□□ -0.18
LGR5-203ENST00000540815 PDE1AP54750 535 aa13.91□□□□□ -0.18
LGR5-203ENST00000540815 LRRCC1Q9C099 1032 aa13.91□□□□□ -0.18
LGR5-203ENST00000540815 ERBB3P21860 1342 aa13.91□□□□□ -0.18
LGR5-203ENST00000540815 DDIT3P35638 169 aa13.91□□□□□ -0.18
LGR5-203ENST00000540815 ZC3H6P61129 1189 aaKnown RBP13.91□□□□□ -0.18
LGR5-203ENST00000540815 GRPEL1Q9HAV7 217 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms