RNA–Protein interactions for RNA: ENST00000540784.5

DDB1-218, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 1,119 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-218ENST00000540784 PROM2Q8N271 834 aa20.37■□□□□ 0.85
DDB1-218ENST00000540784 CEMIPQ8WUJ3 1361 aa20.36■□□□□ 0.85
DDB1-218ENST00000540784 TAF7Q15545 349 aaPredicted RBP20.35■□□□□ 0.85
DDB1-218ENST00000540784 TRIM35Q9UPQ4 493 aa20.35■□□□□ 0.85
DDB1-218ENST00000540784 TNS1Q9HBL0 1735 aaKnown RBP20.35■□□□□ 0.85
DDB1-218ENST00000540784 TOGARAM1Q9Y4F4 1720 aa20.34■□□□□ 0.85
DDB1-218ENST00000540784 BTBD11A6QL63 1104 aa20.34■□□□□ 0.85
DDB1-218ENST00000540784 SLC27A3Q5K4L6 730 aa20.34■□□□□ 0.85
DDB1-218ENST00000540784 THUMPD2Q9BTF0 503 aaKnown RBP20.34■□□□□ 0.85
DDB1-218ENST00000540784 PALLDQ8WX93 1383 aa20.34■□□□□ 0.85
DDB1-218ENST00000540784 BTAF1O14981 1849 aa20.33■□□□□ 0.85
DDB1-218ENST00000540784 SENP3-EIF4A1A0A087X0R7 540 aa20.33■□□□□ 0.85
DDB1-218ENST00000540784 SLC39A6Q13433 755 aa20.33■□□□□ 0.85
DDB1-218ENST00000540784 RBM42Q9BTD8 480 aaKnown RBP20.33■□□□□ 0.85
DDB1-218ENST00000540784 ITGB4P16144 1822 aa20.32■□□□□ 0.84
DDB1-218ENST00000540784 SCN11AQ9UI33 1791 aa20.32■□□□□ 0.84
DDB1-218ENST00000540784 CCNL1Q9UK58 526 aaPredicted RBP20.32■□□□□ 0.84
DDB1-218ENST00000540784 LOC102724428A0A0B4J2F2 783 aa20.31■□□□□ 0.84
DDB1-218ENST00000540784 PTCD1O75127 700 aaKnown RBP20.31■□□□□ 0.84
DDB1-218ENST00000540784 HMGB2P26583 209 aaKnown RBP20.31■□□□□ 0.84
DDB1-218ENST00000540784 SIK1P57059 783 aa20.31■□□□□ 0.84
DDB1-218ENST00000540784 TTC5Q8N0Z6 440 aa20.31■□□□□ 0.84
DDB1-218ENST00000540784 KCNQ4P56696 695 aa20.3■□□□□ 0.84
DDB1-218ENST00000540784 NCBP3Q53F19 620 aaKnown RBP20.3■□□□□ 0.84
DDB1-218ENST00000540784 NBPF14Q5TI25 921 aa20.3■□□□□ 0.84
DDB1-218ENST00000540784 LRRC4BQ9NT99 713 aa20.3■□□□□ 0.84
DDB1-218ENST00000540784 MIS18AQ9NYP9 233 aa20.3■□□□□ 0.84
DDB1-218ENST00000540784 SALL2Q9Y467 1007 aaPredicted RBP20.3■□□□□ 0.84
DDB1-218ENST00000540784 ADAMTS7Q9UKP4 1686 aa20.29■□□□□ 0.84
DDB1-218ENST00000540784 ATP6V1AP38606 617 aa20.29■□□□□ 0.84
DDB1-218ENST00000540784 ZNF790Q6PG37 636 aa20.29■□□□□ 0.84
DDB1-218ENST00000540784 MRC1P22897 1456 aa20.29■□□□□ 0.84
DDB1-218ENST00000540784 CALD1Q05682 793 aaKnown RBP20.28■□□□□ 0.84
DDB1-218ENST00000540784 CCDC27Q2M243 656 aa20.28■□□□□ 0.84
DDB1-218ENST00000540784 NGEFQ8N5V2 710 aa20.28■□□□□ 0.84
DDB1-218ENST00000540784 LAS1LQ9Y4W2 734 aaKnown RBP20.27■□□□□ 0.84
DDB1-218ENST00000540784 DLG5Q8TDM6 1919 aa20.26■□□□□ 0.83
DDB1-218ENST00000540784 KCNQ3O43525 872 aa20.26■□□□□ 0.83
DDB1-218ENST00000540784 WWC1Q8IX03 1113 aa20.26■□□□□ 0.83
DDB1-218ENST00000540784 BABAM1Q9NWV8 329 aa20.26■□□□□ 0.83
DDB1-218ENST00000540784 FMNL2Q96PY5 1086 aa20.25■□□□□ 0.83
DDB1-218ENST00000540784 SLC4A9Q96Q91 983 aa20.25■□□□□ 0.83
DDB1-218ENST00000540784 TSPYL4Q9UJ04 414 aa20.25■□□□□ 0.83
DDB1-218ENST00000540784 ZNF496Q96IT1 587 aaPredicted RBP20.24■□□□□ 0.83
DDB1-218ENST00000540784 STK32BQ9NY57 414 aa20.24■□□□□ 0.83
DDB1-218ENST00000540784 CHL1O00533 1208 aa20.23■□□□□ 0.83
DDB1-218ENST00000540784 ITPK1Q13572 414 aa20.23■□□□□ 0.83
DDB1-218ENST00000540784 VSIG10Q8N0Z9 540 aa20.23■□□□□ 0.83
DDB1-218ENST00000540784 RGPD3A6NKT7 1758 aaPredicted RBP20.22■□□□□ 0.83
DDB1-218ENST00000540784 RGPD4Q7Z3J3 1758 aa20.22■□□□□ 0.83
DDB1-218ENST00000540784 CFAP44Q96MT7 982 aa20.22■□□□□ 0.83
DDB1-218ENST00000540784 VIRMAQ69YN4 1812 aaKnown RBP20.21■□□□□ 0.83
DDB1-218ENST00000540784 GNAI1P63096 354 aa20.21■□□□□ 0.83
DDB1-218ENST00000540784 SLC15A2Q16348 729 aa20.21■□□□□ 0.83
DDB1-218ENST00000540784 WDR63Q8IWG1 891 aa20.21■□□□□ 0.83
DDB1-218ENST00000540784 TEX13AQ9BXU3 409 aaPredicted RBP20.21■□□□□ 0.83
DDB1-218ENST00000540784 DNAJC10Q8IXB1 793 aa20.2■□□□□ 0.82
DDB1-218ENST00000540784 LINC00116Q8NCU8 138 aa20.2■□□□□ 0.82
DDB1-218ENST00000540784 IFT57Q9NWB7 429 aa20.2■□□□□ 0.82
DDB1-218ENST00000540784 LY75O60449 1722 aa20.19■□□□□ 0.82
DDB1-218ENST00000540784 SNRPA1P09661 255 aaKnown RBP20.19■□□□□ 0.82
DDB1-218ENST00000540784 ZNF853P0CG23 659 aa20.19■□□□□ 0.82
DDB1-218ENST00000540784 EIF4A1P60842 406 aaKnown RBP20.19■□□□□ 0.82
DDB1-218ENST00000540784 AKT1S1Q96B36 256 aa20.19■□□□□ 0.82
DDB1-218ENST00000540784 TFCP2L1Q9NZI6 479 aa20.19■□□□□ 0.82
DDB1-218ENST00000540784 HEG1Q9ULI3 1381 aa20.19■□□□□ 0.82
DDB1-218ENST00000540784 STARD3NLO95772 234 aa20.18■□□□□ 0.82
DDB1-218ENST00000540784 R3HDM1Q15032 1099 aaKnown RBP20.18■□□□□ 0.82
DDB1-218ENST00000540784 ANO8Q9HCE9 1232 aaPredicted RBP20.18■□□□□ 0.82
DDB1-218ENST00000540784 SIPA1L3O60292 1781 aaPredicted RBP20.18■□□□□ 0.82
DDB1-218ENST00000540784 ZNF827Q17R98 1081 aa20.17■□□□□ 0.82
DDB1-218ENST00000540784 RC3H1Q5TC82 1133 aaKnown RBP20.17■□□□□ 0.82
DDB1-218ENST00000540784 AK7Q96M32 723 aa20.17■□□□□ 0.82
DDB1-218ENST00000540784 IL16Q14005 1332 aa20.17■□□□□ 0.82
DDB1-218ENST00000540784 RREB1Q92766 1687 aa20.16■□□□□ 0.82
DDB1-218ENST00000540784 PSDA5PKW4 1024 aaPredicted RBP20.16■□□□□ 0.82
DDB1-218ENST00000540784 CYP19A1P11511 503 aaPredicted RBP20.16■□□□□ 0.82
DDB1-218ENST00000540784 MBIPQ9NS73 344 aa20.16■□□□□ 0.82
DDB1-218ENST00000540784 KCPQ6ZWJ8 1503 aa20.16■□□□□ 0.82
DDB1-218ENST00000540784 GIGYF1O75420 1035 aaPredicted RBP20.15■□□□□ 0.82
DDB1-218ENST00000540784 PAPPAQ13219 1627 aa20.14■□□□□ 0.81
DDB1-218ENST00000540784 CRKLP46109 303 aaKnown RBP20.14■□□□□ 0.81
DDB1-218ENST00000540784 USP16Q9Y5T5 823 aa20.14■□□□□ 0.81
DDB1-218ENST00000540784 NUP188Q5SRE5 1749 aa20.13■□□□□ 0.81
DDB1-218ENST00000540784 CNTNAP4Q9C0A0 1308 aa20.13■□□□□ 0.81
DDB1-218ENST00000540784 PRAMEF22A3QJZ6 481 aa20.13■□□□□ 0.81
DDB1-218ENST00000540784 GNPATO15228 680 aa20.13■□□□□ 0.81
DDB1-218ENST00000540784 INTS5Q6P9B9 1019 aaKnown RBP20.13■□□□□ 0.81
DDB1-218ENST00000540784 CCDC87Q9NVE4 849 aa20.13■□□□□ 0.81
DDB1-218ENST00000540784 RPS6KA4O75676 772 aa20.12■□□□□ 0.81
DDB1-218ENST00000540784 FLAD1Q8NFF5 587 aa20.12■□□□□ 0.81
DDB1-218ENST00000540784 RTCBQ9Y3I0 505 aaKnown RBP20.12■□□□□ 0.81
DDB1-218ENST00000540784 MSH5O43196 834 aa20.11■□□□□ 0.81
DDB1-218ENST00000540784 HNRNPUQ00839 825 aaKnown RBP eCLIP20.11■□□□□ 0.81
DDB1-218ENST00000540784 GOLGA2Q08379 1002 aa20.11■□□□□ 0.81
DDB1-218ENST00000540784 ZNF831Q5JPB2 1677 aa20.1■□□□□ 0.81
DDB1-218ENST00000540784 ZNF521Q96K83 1311 aa20.1■□□□□ 0.81
DDB1-218ENST00000540784 A1BGP04217 495 aa20.1■□□□□ 0.81
DDB1-218ENST00000540784 TRAPPC3LQ5T215 181 aa20.1■□□□□ 0.81
DDB1-218ENST00000540784 TSR2Q969E8 191 aaKnown RBP20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms