RNA–Protein interactions for RNA: ENST00000540128.1

TRIM65-202, Transcript of tripartite motif containing 65, humanhuman

TSL 3

Gene TRIM65, Length 886 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM65-202ENST00000540128 MRS2Q9HD23 443 aa29.23■■■□□ 2.27
TRIM65-202ENST00000540128 LY75O60449 1722 aa29.23■■■□□ 2.27
TRIM65-202ENST00000540128 NUP188Q5SRE5 1749 aa29.23■■■□□ 2.27
TRIM65-202ENST00000540128 CCNL1Q9UK58 526 aaPredicted RBP29.21■■■□□ 2.27
TRIM65-202ENST00000540128 HMGB2P26583 209 aaKnown RBP29.19■■■□□ 2.26
TRIM65-202ENST00000540128 RTF1Q92541 710 aaKnown RBP29.19■■■□□ 2.26
TRIM65-202ENST00000540128 LOC102724428A0A0B4J2F2 783 aa29.17■■■□□ 2.26
TRIM65-202ENST00000540128 TMPOP42166 694 aaKnown RBP29.17■■■□□ 2.26
TRIM65-202ENST00000540128 SIK1P57059 783 aa29.17■■■□□ 2.26
TRIM65-202ENST00000540128 CCDC146Q8IYE0 955 aa29.17■■■□□ 2.26
TRIM65-202ENST00000540128 ANO8Q9HCE9 1232 aaPredicted RBP29.17■■■□□ 2.26
TRIM65-202ENST00000540128 KCNQ4P56696 695 aa29.16■■■□□ 2.26
TRIM65-202ENST00000540128 TEFQ10587 303 aa29.16■■■□□ 2.26
TRIM65-202ENST00000540128 MCM10Q7L590 875 aa29.16■■■□□ 2.26
TRIM65-202ENST00000540128 VIRMAQ69YN4 1812 aaKnown RBP29.15■■■□□ 2.26
TRIM65-202ENST00000540128 RIPK4P57078 832 aa29.14■■■□□ 2.26
TRIM65-202ENST00000540128 PAPPAQ13219 1627 aa29.13■■■□□ 2.25
TRIM65-202ENST00000540128 DCTN1Q14203 1278 aa29.13■■■□□ 2.25
TRIM65-202ENST00000540128 R3HDM1Q15032 1099 aaKnown RBP29.13■■■□□ 2.25
TRIM65-202ENST00000540128 SLC15A2Q16348 729 aa29.13■■■□□ 2.25
TRIM65-202ENST00000540128 AKT1S1Q96B36 256 aa29.13■■■□□ 2.25
TRIM65-202ENST00000540128 STK32BQ9NY57 414 aa29.13■■■□□ 2.25
TRIM65-202ENST00000540128 DIEXFQ68CQ4 756 aaKnown RBP29.12■■■□□ 2.25
TRIM65-202ENST00000540128 SLC4A9Q96Q91 983 aa29.12■■■□□ 2.25
TRIM65-202ENST00000540128 SLC39A6Q13433 755 aa29.1■■■□□ 2.25
TRIM65-202ENST00000540128 DLG5Q8TDM6 1919 aa29.1■■■□□ 2.25
TRIM65-202ENST00000540128 PSDA5PKW4 1024 aaPredicted RBP29.09■■■□□ 2.25
TRIM65-202ENST00000540128 ATP6V1AP38606 617 aa29.09■■■□□ 2.25
TRIM65-202ENST00000540128 LMOD3Q0VAK6 560 aa29.09■■■□□ 2.25
TRIM65-202ENST00000540128 ITPK1Q13572 414 aa29.09■■■□□ 2.25
TRIM65-202ENST00000540128 ZNF827Q17R98 1081 aa29.09■■■□□ 2.25
TRIM65-202ENST00000540128 RBM42Q9BTD8 480 aaKnown RBP29.09■■■□□ 2.25
TRIM65-202ENST00000540128 ZNF831Q5JPB2 1677 aa29.08■■■□□ 2.25
TRIM65-202ENST00000540128 SIPA1L3O60292 1781 aaPredicted RBP29.08■■■□□ 2.25
TRIM65-202ENST00000540128 PTCD1O75127 700 aaKnown RBP29.07■■■□□ 2.24
TRIM65-202ENST00000540128 TAF7Q15545 349 aaPredicted RBP29.07■■■□□ 2.24
TRIM65-202ENST00000540128 ZNF790Q6PG37 636 aa29.07■■■□□ 2.24
TRIM65-202ENST00000540128 RRP7AQ9Y3A4 280 aaKnown RBP29.07■■■□□ 2.24
TRIM65-202ENST00000540128 CCER2I3L3R5 266 aa29.06■■■□□ 2.24
TRIM65-202ENST00000540128 TRIM35Q9UPQ4 493 aa29.06■■■□□ 2.24
TRIM65-202ENST00000540128 BTBD11A6QL63 1104 aa29.05■■■□□ 2.24
TRIM65-202ENST00000540128 APAF1O14727 1248 aa29.05■■■□□ 2.24
TRIM65-202ENST00000540128 VSIG10Q8N0Z9 540 aa29.04■■■□□ 2.24
TRIM65-202ENST00000540128 LINC00116Q8NCU8 138 aa29.04■■■□□ 2.24
TRIM65-202ENST00000540128 THUMPD2Q9BTF0 503 aaKnown RBP29.04■■■□□ 2.24
TRIM65-202ENST00000540128 NEUROD2Q15784 382 aa29.03■■■□□ 2.24
TRIM65-202ENST00000540128 TTC5Q8N0Z6 440 aa29.03■■■□□ 2.24
TRIM65-202ENST00000540128 KCPQ6ZWJ8 1503 aa29.03■■■□□ 2.24
TRIM65-202ENST00000540128 TAF1LQ8IZX4 1826 aa29.03■■■□□ 2.24
TRIM65-202ENST00000540128 RC3H1Q5TC82 1133 aaKnown RBP29.01■■■□□ 2.23
TRIM65-202ENST00000540128 ZNF496Q96IT1 587 aaPredicted RBP29.01■■■□□ 2.23
TRIM65-202ENST00000540128 C5P01031 1676 aa29.01■■■□□ 2.23
TRIM65-202ENST00000540128 KCNQ3O43525 872 aa29■■■□□ 2.23
TRIM65-202ENST00000540128 NCBP3Q53F19 620 aaKnown RBP29■■■□□ 2.23
TRIM65-202ENST00000540128 TFCP2L1Q9NZI6 479 aa29■■■□□ 2.23
TRIM65-202ENST00000540128 BABAM1Q9NWV8 329 aa28.99■■■□□ 2.23
TRIM65-202ENST00000540128 UBR2Q8IWV8 1755 aa28.98■■■□□ 2.23
TRIM65-202ENST00000540128 CICQ96RK0 1608 aaPredicted RBP28.98■■■□□ 2.23
TRIM65-202ENST00000540128 C4BP0C0L5 1744 aa28.97■■■□□ 2.23
TRIM65-202ENST00000540128 CNTNAP4Q9C0A0 1308 aa28.97■■■□□ 2.23
TRIM65-202ENST00000540128 DNAJC10Q8IXB1 793 aa28.97■■■□□ 2.23
TRIM65-202ENST00000540128 FAM9BQ8IZU0 186 aa28.97■■■□□ 2.23
TRIM65-202ENST00000540128 FMNL2Q96PY5 1086 aa28.97■■■□□ 2.23
TRIM65-202ENST00000540128 PNPLA7Q6ZV29 1317 aa28.96■■■□□ 2.23
TRIM65-202ENST00000540128 AK7Q96M32 723 aa28.96■■■□□ 2.23
TRIM65-202ENST00000540128 PDGFDQ9GZP0 370 aaPredicted RBP28.96■■■□□ 2.23
TRIM65-202ENST00000540128 MIS18AQ9NYP9 233 aa28.96■■■□□ 2.23
TRIM65-202ENST00000540128 HEG1Q9ULI3 1381 aa28.96■■■□□ 2.23
TRIM65-202ENST00000540128 TEX13AQ9BXU3 409 aaPredicted RBP28.95■■■□□ 2.22
TRIM65-202ENST00000540128 CCDC27Q2M243 656 aa28.94■■■□□ 2.22
TRIM65-202ENST00000540128 MIER1Q8N108 512 aa28.94■■■□□ 2.22
TRIM65-202ENST00000540128 FLAD1Q8NFF5 587 aa28.94■■■□□ 2.22
TRIM65-202ENST00000540128 QSER1Q2KHR3 1735 aa28.94■■■□□ 2.22
TRIM65-202ENST00000540128 CYP19A1P11511 503 aaPredicted RBP28.93■■■□□ 2.22
TRIM65-202ENST00000540128 COL5A3P25940 1745 aaPredicted RBP28.91■■■□□ 2.22
TRIM65-202ENST00000540128 TJP1Q07157 1748 aa28.91■■■□□ 2.22
TRIM65-202ENST00000540128 CASZ1Q86V15 1759 aa28.91■■■□□ 2.22
TRIM65-202ENST00000540128 CHL1O00533 1208 aa28.91■■■□□ 2.22
TRIM65-202ENST00000540128 SSFA2P28290 1259 aa28.91■■■□□ 2.22
TRIM65-202ENST00000540128 CRKLP46109 303 aaKnown RBP28.91■■■□□ 2.22
TRIM65-202ENST00000540128 INTS5Q6P9B9 1019 aaKnown RBP28.91■■■□□ 2.22
TRIM65-202ENST00000540128 AMIGO3Q86WK7 504 aa28.91■■■□□ 2.22
TRIM65-202ENST00000540128 COL23A1Q86Y22 540 aaPredicted RBP28.91■■■□□ 2.22
TRIM65-202ENST00000540128 SLC16A10Q8TF71 515 aa28.91■■■□□ 2.22
TRIM65-202ENST00000540128 GNPATO15228 680 aa28.9■■■□□ 2.22
TRIM65-202ENST00000540128 RPS6KA4O75676 772 aa28.9■■■□□ 2.22
TRIM65-202ENST00000540128 STARD3NLO95772 234 aa28.89■■■□□ 2.22
TRIM65-202ENST00000540128 SNRPA1P09661 255 aaKnown RBP28.89■■■□□ 2.22
TRIM65-202ENST00000540128 EIF4A1P60842 406 aaKnown RBP28.89■■■□□ 2.22
TRIM65-202ENST00000540128 MYH14Q7Z406 1995 aaKnown RBP28.89■■■□□ 2.22
TRIM65-202ENST00000540128 CALD1Q05682 793 aaKnown RBP28.88■■■□□ 2.21
TRIM65-202ENST00000540128 TSPYL4Q9UJ04 414 aa28.88■■■□□ 2.21
TRIM65-202ENST00000540128 RTCBQ9Y3I0 505 aaKnown RBP28.88■■■□□ 2.21
TRIM65-202ENST00000540128 TUBGCP6Q96RT7 1819 aa28.87■■■□□ 2.21
TRIM65-202ENST00000540128 UBR3Q6ZT12 1888 aa28.87■■■□□ 2.21
TRIM65-202ENST00000540128 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP28.87■■■□□ 2.21
TRIM65-202ENST00000540128 ZNF853P0CG23 659 aa28.87■■■□□ 2.21
TRIM65-202ENST00000540128 ADRA2BP18089 450 aa28.87■■■□□ 2.21
TRIM65-202ENST00000540128 NGEFQ8N5V2 710 aa28.87■■■□□ 2.21
TRIM65-202ENST00000540128 CFAP44Q96MT7 982 aa28.87■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms