RNA–Protein interactions for RNA: ENST00000539594.5

ESRRA-206, Transcript of estrogen related receptor alpha, humanhuman

TSL 3

Gene ESRRA, Length 747 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ESRRA-206ENST00000539594 NFATC2IPQ8NCF5 419 aa37.4■■■■□ 3.58
ESRRA-206ENST00000539594 ADAMTS7Q9UKP4 1686 aa37.4■■■■□ 3.58
ESRRA-206ENST00000539594 ZNF316A6NFI3 1004 aaPredicted RBP37.39■■■■□ 3.58
ESRRA-206ENST00000539594 SLC52A2Q9HAB3 445 aa37.38■■■■□ 3.57
ESRRA-206ENST00000539594 MAP3K5Q99683 1374 aa37.38■■■■□ 3.57
ESRRA-206ENST00000539594 MRC1P22897 1456 aa37.38■■■■□ 3.57
ESRRA-206ENST00000539594 GNAT3A8MTJ3 354 aa37.37■■■■□ 3.57
ESRRA-206ENST00000539594 PDGFDQ9GZP0 370 aaPredicted RBP37.37■■■■□ 3.57
ESRRA-206ENST00000539594 LGR6Q9HBX8 967 aa37.37■■■■□ 3.57
ESRRA-206ENST00000539594 ZNF831Q5JPB2 1677 aa37.36■■■■□ 3.57
ESRRA-206ENST00000539594 PHACTR3Q96KR7 559 aa37.35■■■■□ 3.57
ESRRA-206ENST00000539594 TUBGCP6Q96RT7 1819 aa37.35■■■■□ 3.57
ESRRA-206ENST00000539594 ATP6V1AP38606 617 aa37.34■■■■□ 3.57
ESRRA-206ENST00000539594 MTFR1LQ9H019 292 aa37.34■■■■□ 3.57
ESRRA-206ENST00000539594 C4BP0C0L5 1744 aa37.33■■■■□ 3.57
ESRRA-206ENST00000539594 NEFMP07197 916 aa37.33■■■■□ 3.57
ESRRA-206ENST00000539594 SLC16A10Q8TF71 515 aa37.33■■■■□ 3.57
ESRRA-206ENST00000539594 PNNQ9H307 717 aaKnown RBP37.33■■■■□ 3.57
ESRRA-206ENST00000539594 PNPLA7Q6ZV29 1317 aa37.33■■■■□ 3.57
ESRRA-206ENST00000539594 ZBTB7AO95365 584 aa37.32■■■■□ 3.56
ESRRA-206ENST00000539594 PRKRIP1Q9H875 184 aaPredicted RBP37.32■■■■□ 3.56
ESRRA-206ENST00000539594 FLAD1Q8NFF5 587 aa37.3■■■■□ 3.56
ESRRA-206ENST00000539594 RBM42Q9BTD8 480 aaKnown RBP37.3■■■■□ 3.56
ESRRA-206ENST00000539594 AK7Q96M32 723 aa37.29■■■■□ 3.56
ESRRA-206ENST00000539594 ITPK1Q13572 414 aa37.27■■■■□ 3.56
ESRRA-206ENST00000539594 LINC00116Q8NCU8 138 aa37.26■■■■□ 3.56
ESRRA-206ENST00000539594 TEFQ10587 303 aa37.25■■■■□ 3.55
ESRRA-206ENST00000539594 PPP1R1BQ9UD71 204 aaPredicted RBP37.25■■■■□ 3.55
ESRRA-206ENST00000539594 ATF5Q9Y2D1 282 aaPredicted RBP37.25■■■■□ 3.55
ESRRA-206ENST00000539594 IL17REQ8NFR9 667 aa37.24■■■■□ 3.55
ESRRA-206ENST00000539594 UBR3Q6ZT12 1888 aa37.23■■■■□ 3.55
ESRRA-206ENST00000539594 SLC4A9Q96Q91 983 aa37.23■■■■□ 3.55
ESRRA-206ENST00000539594 CEMIPQ8WUJ3 1361 aa37.22■■■■□ 3.55
ESRRA-206ENST00000539594 PTCD1O75127 700 aaKnown RBP37.22■■■■□ 3.55
ESRRA-206ENST00000539594 RTF1Q92541 710 aaKnown RBP37.22■■■■□ 3.55
ESRRA-206ENST00000539594 HTATSF1O43719 755 aaKnown RBP37.21■■■■□ 3.55
ESRRA-206ENST00000539594 COL5A3P25940 1745 aaPredicted RBP37.21■■■■□ 3.55
ESRRA-206ENST00000539594 PTGER2P43116 358 aa37.2■■■■□ 3.55
ESRRA-206ENST00000539594 COL23A1Q86Y22 540 aaPredicted RBP37.2■■■■□ 3.55
ESRRA-206ENST00000539594 PLEKHF1Q96S99 279 aa37.2■■■■□ 3.55
ESRRA-206ENST00000539594 CICQ96RK0 1608 aaPredicted RBP37.2■■■■□ 3.55
ESRRA-206ENST00000539594 SSFA2P28290 1259 aa37.19■■■■□ 3.54
ESRRA-206ENST00000539594 RC3H1Q5TC82 1133 aaKnown RBP37.19■■■■□ 3.54
ESRRA-206ENST00000539594 SIPA1L3O60292 1781 aaPredicted RBP37.19■■■■□ 3.54
ESRRA-206ENST00000539594 MSH5O43196 834 aa37.18■■■■□ 3.54
ESRRA-206ENST00000539594 MAPK8IP3Q9UPT6 1336 aa37.17■■■■□ 3.54
ESRRA-206ENST00000539594 COL24A1Q17RW2 1714 aa37.16■■■■□ 3.54
ESRRA-206ENST00000539594 CNTNAP4Q9C0A0 1308 aa37.16■■■■□ 3.54
ESRRA-206ENST00000539594 SGIP1Q9BQI5 828 aa37.16■■■■□ 3.54
ESRRA-206ENST00000539594 GNPATO15228 680 aa37.15■■■■□ 3.54
ESRRA-206ENST00000539594 SLC39A6Q13433 755 aa37.15■■■■□ 3.54
ESRRA-206ENST00000539594 TTC5Q8N0Z6 440 aa37.15■■■■□ 3.54
ESRRA-206ENST00000539594 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP37.13■■■■□ 3.53
ESRRA-206ENST00000539594 UBR2Q8IWV8 1755 aa37.13■■■■□ 3.53
ESRRA-206ENST00000539594 KCPQ6ZWJ8 1503 aa37.12■■■■□ 3.53
ESRRA-206ENST00000539594 POLD1P28340 1107 aa37.12■■■■□ 3.53
ESRRA-206ENST00000539594 WDR43Q15061 677 aaKnown RBP eCLIP37.12■■■■□ 3.53
ESRRA-206ENST00000539594 VSIG10Q8N0Z9 540 aa37.12■■■■□ 3.53
ESRRA-206ENST00000539594 TJP1Q07157 1748 aa37.12■■■■□ 3.53
ESRRA-206ENST00000539594 DLG5Q8TDM6 1919 aa37.12■■■■□ 3.53
ESRRA-206ENST00000539594 NFE2L2Q16236 605 aa37.11■■■■□ 3.53
ESRRA-206ENST00000539594 RTCBQ9Y3I0 505 aaKnown RBP37.11■■■■□ 3.53
ESRRA-206ENST00000539594 PHF14O94880 888 aa37.1■■■■□ 3.53
ESRRA-206ENST00000539594 ZNF790Q6PG37 636 aa37.1■■■■□ 3.53
ESRRA-206ENST00000539594 MCM10Q7L590 875 aa37.09■■■■□ 3.53
ESRRA-206ENST00000539594 MYH14Q7Z406 1995 aaKnown RBP37.09■■■■□ 3.53
ESRRA-206ENST00000539594 ADRA2BP18089 450 aa37.08■■■■□ 3.53
ESRRA-206ENST00000539594 AMIGO3Q86WK7 504 aa37.07■■■■□ 3.52
ESRRA-206ENST00000539594 ARXQ96QS3 562 aa37.07■■■■□ 3.52
ESRRA-206ENST00000539594 BTBD11A6QL63 1104 aa37.06■■■■□ 3.52
ESRRA-206ENST00000539594 RPS6KA4O75676 772 aa37.06■■■■□ 3.52
ESRRA-206ENST00000539594 CRKLP46109 303 aaKnown RBP37.05■■■■□ 3.52
ESRRA-206ENST00000539594 TRAPPC3LQ5T215 181 aa37.05■■■■□ 3.52
ESRRA-206ENST00000539594 DNAJC10Q8IXB1 793 aa37.05■■■■□ 3.52
ESRRA-206ENST00000539594 DCTN1Q14203 1278 aa37.03■■■■□ 3.52
ESRRA-206ENST00000539594 ANP32CO43423 234 aa37.01■■■■□ 3.52
ESRRA-206ENST00000539594 ZNF496Q96IT1 587 aaPredicted RBP37.01■■■■□ 3.52
ESRRA-206ENST00000539594 FMNL2Q96PY5 1086 aa37.01■■■■□ 3.52
ESRRA-206ENST00000539594 TEX13AQ9BXU3 409 aaPredicted RBP37.01■■■■□ 3.52
ESRRA-206ENST00000539594 HEG1Q9ULI3 1381 aa37.01■■■■□ 3.51
ESRRA-206ENST00000539594 CYP19A1P11511 503 aaPredicted RBP36.99■■■■□ 3.51
ESRRA-206ENST00000539594 TAF7Q15545 349 aaPredicted RBP36.99■■■■□ 3.51
ESRRA-206ENST00000539594 SMIM5Q71RC9 77 aa36.99■■■■□ 3.51
ESRRA-206ENST00000539594 CCDC87Q9NVE4 849 aa36.99■■■■□ 3.51
ESRRA-206ENST00000539594 RUNDC1Q96C34 613 aa36.98■■■■□ 3.51
ESRRA-206ENST00000539594 ADAMTS8Q9UP79 889 aa36.98■■■■□ 3.51
ESRRA-206ENST00000539594 STARD3NLO95772 234 aa36.97■■■■□ 3.51
ESRRA-206ENST00000539594 LMOD3Q0VAK6 560 aa36.97■■■■□ 3.51
ESRRA-206ENST00000539594 MSL1Q68DK7 614 aa36.97■■■■□ 3.51
ESRRA-206ENST00000539594 INTS5Q6P9B9 1019 aaKnown RBP36.97■■■■□ 3.51
ESRRA-206ENST00000539594 PNISRQ8TF01 805 aaKnown RBP36.96■■■■□ 3.51
ESRRA-206ENST00000539594 ARHGEF1Q92888 912 aaKnown RBP36.96■■■■□ 3.51
ESRRA-206ENST00000539594 FHDC1Q9C0D6 1143 aaPredicted RBP36.96■■■■□ 3.51
ESRRA-206ENST00000539594 RFC4P35249 363 aa36.95■■■■□ 3.51
ESRRA-206ENST00000539594 TMPOP42166 694 aaKnown RBP36.95■■■■□ 3.51
ESRRA-206ENST00000539594 RIPK4P57078 832 aa36.95■■■■□ 3.51
ESRRA-206ENST00000539594 CCDC146Q8IYE0 955 aa36.93■■■■□ 3.5
ESRRA-206ENST00000539594 SYT17Q9BSW7 474 aa36.93■■■■□ 3.5
ESRRA-206ENST00000539594 C4AP0C0L4 1744 aa36.91■■■■□ 3.5
ESRRA-206ENST00000539594 KCNQ3O43525 872 aa36.91■■■■□ 3.5
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms