RNA–Protein interactions for RNA: ENST00000539477.5

MLH1-222, Transcript of mutL homolog 1, humanhuman

TSL 2 BASIC

Gene MLH1, Length 2,366 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MLH1-222ENST00000539477 GAS2L2Q8NHY3 880 aa12.3□□□□□ -0.44
MLH1-222ENST00000539477 APAF1O14727 1248 aa12.29□□□□□ -0.44
MLH1-222ENST00000539477 RNMTO43148 476 aaKnown RBP12.29□□□□□ -0.44
MLH1-222ENST00000539477 C5P01031 1676 aa12.29□□□□□ -0.44
MLH1-222ENST00000539477 PAPPAQ13219 1627 aa12.29□□□□□ -0.44
MLH1-222ENST00000539477 MYH14Q7Z406 1995 aaKnown RBP12.29□□□□□ -0.44
MLH1-222ENST00000539477 CABP4P57796 275 aa12.29□□□□□ -0.44
MLH1-222ENST00000539477 CAMKK2Q96RR4 588 aa12.29□□□□□ -0.44
MLH1-222ENST00000539477 LRRC4BQ9NT99 713 aa12.29□□□□□ -0.44
MLH1-222ENST00000539477 MIS18AQ9NYP9 233 aa12.29□□□□□ -0.44
MLH1-222ENST00000539477 PALLDQ8WX93 1383 aa12.29□□□□□ -0.44
MLH1-222ENST00000539477 MRC1P22897 1456 aa12.28□□□□□ -0.44
MLH1-222ENST00000539477 UBR2Q8IWV8 1755 aa12.28□□□□□ -0.44
MLH1-222ENST00000539477 PTCD1O75127 700 aaKnown RBP12.28□□□□□ -0.44
MLH1-222ENST00000539477 SMIM5Q71RC9 77 aa12.28□□□□□ -0.44
MLH1-222ENST00000539477 ANO8Q9HCE9 1232 aaPredicted RBP12.28□□□□□ -0.44
MLH1-222ENST00000539477 NEFMP07197 916 aa12.27□□□□□ -0.44
MLH1-222ENST00000539477 TMPOP42166 694 aaKnown RBP12.27□□□□□ -0.44
MLH1-222ENST00000539477 RIPK4P57078 832 aa12.27□□□□□ -0.44
MLH1-222ENST00000539477 NFE2L2Q16236 605 aa12.27□□□□□ -0.44
MLH1-222ENST00000539477 TXNRD1Q16881 649 aa12.27□□□□□ -0.44
MLH1-222ENST00000539477 PSDA5PKW4 1024 aaPredicted RBP12.27□□□□□ -0.45
MLH1-222ENST00000539477 KCNQ3O43525 872 aa12.27□□□□□ -0.45
MLH1-222ENST00000539477 RUNDC1Q96C34 613 aa12.27□□□□□ -0.45
MLH1-222ENST00000539477 SLC52A2Q9HAB3 445 aa12.27□□□□□ -0.45
MLH1-222ENST00000539477 CCDC125Q86Z20 511 aa12.26□□□□□ -0.45
MLH1-222ENST00000539477 ATG3Q9NT62 314 aa12.26□□□□□ -0.45
MLH1-222ENST00000539477 PLEKHG2Q9H7P9 1386 aa12.26□□□□□ -0.45
MLH1-222ENST00000539477 TJP1Q07157 1748 aa12.26□□□□□ -0.45
MLH1-222ENST00000539477 HSP90AB1P08238 724 aaKnown RBP12.26□□□□□ -0.45
MLH1-222ENST00000539477 RTF1Q92541 710 aaKnown RBP12.26□□□□□ -0.45
MLH1-222ENST00000539477 SLC4A9Q96Q91 983 aa12.26□□□□□ -0.45
MLH1-222ENST00000539477 CEMIPQ8WUJ3 1361 aa12.26□□□□□ -0.45
MLH1-222ENST00000539477 KDM3BQ7LBC6 1761 aa12.25□□□□□ -0.45
MLH1-222ENST00000539477 TEFQ10587 303 aa12.25□□□□□ -0.45
MLH1-222ENST00000539477 RBM42Q9BTD8 480 aaKnown RBP12.25□□□□□ -0.45
MLH1-222ENST00000539477 PDGFDQ9GZP0 370 aaPredicted RBP12.25□□□□□ -0.45
MLH1-222ENST00000539477 COL5A3P25940 1745 aaPredicted RBP12.25□□□□□ -0.45
MLH1-222ENST00000539477 ERVV-2B6SEH9 535 aa12.25□□□□□ -0.45
MLH1-222ENST00000539477 PLSCR1O15162 318 aa12.24□□□□□ -0.45
MLH1-222ENST00000539477 CCNL1Q9UK58 526 aaPredicted RBP12.24□□□□□ -0.45
MLH1-222ENST00000539477 TRIM35Q9UPQ4 493 aa12.24□□□□□ -0.45
MLH1-222ENST00000539477 KCPQ6ZWJ8 1503 aa12.24□□□□□ -0.45
MLH1-222ENST00000539477 AMIGO3Q86WK7 504 aa12.23□□□□□ -0.45
MLH1-222ENST00000539477 C4BP0C0L5 1744 aa12.23□□□□□ -0.45
MLH1-222ENST00000539477 PRAMEF22A3QJZ6 481 aa12.23□□□□□ -0.45
MLH1-222ENST00000539477 ZNF827Q17R98 1081 aa12.23□□□□□ -0.45
MLH1-222ENST00000539477 UBR3Q6ZT12 1888 aa12.23□□□□□ -0.45
MLH1-222ENST00000539477 LOC102724428A0A0B4J2F2 783 aa12.22□□□□□ -0.45
MLH1-222ENST00000539477 SIK1P57059 783 aa12.22□□□□□ -0.45
MLH1-222ENST00000539477 ITPK1Q13572 414 aa12.22□□□□□ -0.45
MLH1-222ENST00000539477 R3HDM1Q15032 1099 aaKnown RBP12.22□□□□□ -0.45
MLH1-222ENST00000539477 LAS1LQ9Y4W2 734 aaKnown RBP12.22□□□□□ -0.45
MLH1-222ENST00000539477 BTBD11A6QL63 1104 aa12.21□□□□□ -0.45
MLH1-222ENST00000539477 ATP6V1AP38606 617 aa12.21□□□□□ -0.45
MLH1-222ENST00000539477 PNNQ9H307 717 aaKnown RBP12.21□□□□□ -0.45
MLH1-222ENST00000539477 KRT24Q2M2I5 525 aa12.21□□□□□ -0.46
MLH1-222ENST00000539477 LINC00116Q8NCU8 138 aa12.21□□□□□ -0.46
MLH1-222ENST00000539477 ZNF496Q96IT1 587 aaPredicted RBP12.21□□□□□ -0.46
MLH1-222ENST00000539477 PIP4K2AP48426 406 aaPredicted RBP12.2□□□□□ -0.46
MLH1-222ENST00000539477 CCER2I3L3R5 266 aa12.2□□□□□ -0.46
MLH1-222ENST00000539477 ZNF790Q6PG37 636 aa12.2□□□□□ -0.46
MLH1-222ENST00000539477 C4AP0C0L4 1744 aa12.19□□□□□ -0.46
MLH1-222ENST00000539477 PHF14O94880 888 aa12.19□□□□□ -0.46
MLH1-222ENST00000539477 TTC5Q8N0Z6 440 aa12.19□□□□□ -0.46
MLH1-222ENST00000539477 DNAJC10Q8IXB1 793 aa12.18□□□□□ -0.46
MLH1-222ENST00000539477 SMARCC1Q92922 1105 aaPredicted RBP12.17□□□□□ -0.46
MLH1-222ENST00000539477 TSR2Q969E8 191 aaKnown RBP12.17□□□□□ -0.46
MLH1-222ENST00000539477 TSPYL4Q9UJ04 414 aa12.17□□□□□ -0.46
MLH1-222ENST00000539477 LAMB4A4D0S4 1761 aa12.17□□□□□ -0.46
MLH1-222ENST00000539477 ZNF831Q5JPB2 1677 aa12.17□□□□□ -0.46
MLH1-222ENST00000539477 TAF7Q15545 349 aaPredicted RBP12.16□□□□□ -0.46
MLH1-222ENST00000539477 WWC1Q8IX03 1113 aa12.16□□□□□ -0.46
MLH1-222ENST00000539477 SPINK5Q9NQ38 1064 aaPredicted RBP12.16□□□□□ -0.46
MLH1-222ENST00000539477 CASZ1Q86V15 1759 aa12.16□□□□□ -0.46
MLH1-222ENST00000539477 GNPATO15228 680 aa12.15□□□□□ -0.46
MLH1-222ENST00000539477 HTATSF1O43719 755 aaKnown RBP12.15□□□□□ -0.46
MLH1-222ENST00000539477 SLC27A3Q5K4L6 730 aa12.15□□□□□ -0.46
MLH1-222ENST00000539477 NECTIN2Q92692 538 aa12.15□□□□□ -0.46
MLH1-222ENST00000539477 TFCP2L1Q9NZI6 479 aa12.15□□□□□ -0.46
MLH1-222ENST00000539477 ZNF330Q9Y3S2 320 aaPredicted RBP12.15□□□□□ -0.46
MLH1-222ENST00000539477 SLC15A2Q16348 729 aa12.15□□□□□ -0.46
MLH1-222ENST00000539477 CICQ96RK0 1608 aaPredicted RBP12.15□□□□□ -0.46
MLH1-222ENST00000539477 HEG1Q9ULI3 1381 aa12.15□□□□□ -0.47
MLH1-222ENST00000539477 ELL2O00472 640 aaPredicted RBP12.14□□□□□ -0.47
MLH1-222ENST00000539477 CRKLP46109 303 aaKnown RBP12.14□□□□□ -0.47
MLH1-222ENST00000539477 LMOD3Q0VAK6 560 aa12.14□□□□□ -0.47
MLH1-222ENST00000539477 AKT1S1Q96B36 256 aa12.14□□□□□ -0.47
MLH1-222ENST00000539477 MBIPQ9NS73 344 aa12.14□□□□□ -0.47
MLH1-222ENST00000539477 USP16Q9Y5T5 823 aa12.14□□□□□ -0.47
MLH1-222ENST00000539477 QSER1Q2KHR3 1735 aa12.14□□□□□ -0.47
MLH1-222ENST00000539477 ZBTB1Q9Y2K1 713 aa12.14□□□□□ -0.47
MLH1-222ENST00000539477 PNPLA7Q6ZV29 1317 aa12.13□□□□□ -0.47
MLH1-222ENST00000539477 MSH5O43196 834 aa12.13□□□□□ -0.47
MLH1-222ENST00000539477 ZBTB7AO95365 584 aa12.13□□□□□ -0.47
MLH1-222ENST00000539477 AK7Q96M32 723 aa12.13□□□□□ -0.47
MLH1-222ENST00000539477 STK32BQ9NY57 414 aa12.13□□□□□ -0.47
MLH1-222ENST00000539477 A1BGP04217 495 aa12.13□□□□□ -0.47
MLH1-222ENST00000539477 MSL1Q68DK7 614 aa12.13□□□□□ -0.47
MLH1-222ENST00000539477 FMNL2Q96PY5 1086 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms