RNA–Protein interactions for RNA: ENST00000539049.5

DDX11-213, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 5

Gene DDX11, Length 3,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-213ENST00000539049 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.1□□□□□ -0.31
DDX11-213ENST00000539049 SEMA3FQ13275 785 aa13.1□□□□□ -0.31
DDX11-213ENST00000539049 CHAMP1Q96JM3 812 aa13.1□□□□□ -0.31
DDX11-213ENST00000539049 HTATSF1O43719 755 aaKnown RBP13.1□□□□□ -0.31
DDX11-213ENST00000539049 PLXNC1O60486 1568 aa13.1□□□□□ -0.31
DDX11-213ENST00000539049 ZNF853P0CG23 659 aa13.1□□□□□ -0.31
DDX11-213ENST00000539049 ZNF592Q92610 1267 aa13.1□□□□□ -0.31
DDX11-213ENST00000539049 SCAF11Q99590 1463 aaKnown RBP13.1□□□□□ -0.31
DDX11-213ENST00000539049 EXOSC9Q06265 439 aaKnown RBP13.09□□□□□ -0.31
DDX11-213ENST00000539049 FAM212AQ96EL1 285 aa13.09□□□□□ -0.31
DDX11-213ENST00000539049 RRP15Q9Y3B9 282 aaKnown RBP13.09□□□□□ -0.31
DDX11-213ENST00000539049 SYNMO15061 1565 aa13.09□□□□□ -0.31
DDX11-213ENST00000539049 POLR3GO15318 223 aaPredicted RBP13.09□□□□□ -0.31
DDX11-213ENST00000539049 CYB5RLQ6IPT4 315 aa13.09□□□□□ -0.31
DDX11-213ENST00000539049 SRLQ86TD4 932 aa13.09□□□□□ -0.31
DDX11-213ENST00000539049 CARD14Q9BXL6 1004 aa13.09□□□□□ -0.31
DDX11-213ENST00000539049 CWC22Q9HCG8 908 aaKnown RBP13.09□□□□□ -0.31
DDX11-213ENST00000539049 MED4Q9NPJ6 270 aa13.09□□□□□ -0.31
DDX11-213ENST00000539049 TPM4P67936 248 aa13.08□□□□□ -0.31
DDX11-213ENST00000539049 RAI14Q9P0K7 980 aa13.08□□□□□ -0.31
DDX11-213ENST00000539049 CLASP1Q7Z460 1538 aa13.08□□□□□ -0.32
DDX11-213ENST00000539049 MADDQ8WXG6 1647 aa13.08□□□□□ -0.32
DDX11-213ENST00000539049 SGSM3Q96HU1 749 aa13.08□□□□□ -0.32
DDX11-213ENST00000539049 SH3BP1Q9Y3L3 701 aa13.08□□□□□ -0.32
DDX11-213ENST00000539049 HCLS1P14317 486 aaPredicted RBP13.07□□□□□ -0.32
DDX11-213ENST00000539049 ELF2Q15723 593 aa13.07□□□□□ -0.32
DDX11-213ENST00000539049 LRCH2Q5VUJ6 765 aa13.07□□□□□ -0.32
DDX11-213ENST00000539049 ERCC6L2Q5T890 1561 aa13.07□□□□□ -0.32
DDX11-213ENST00000539049 RAD50Q92878 1312 aa13.07□□□□□ -0.32
DDX11-213ENST00000539049 KDM4AO75164 1064 aa13.07□□□□□ -0.32
DDX11-213ENST00000539049 ATP6V1AP38606 617 aa13.07□□□□□ -0.32
DDX11-213ENST00000539049 ANKRD45Q5TZF3 282 aa13.07□□□□□ -0.32
DDX11-213ENST00000539049 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.07□□□□□ -0.32
DDX11-213ENST00000539049 ANKRD36BQ8N2N9 1353 aa13.07□□□□□ -0.32
DDX11-213ENST00000539049 ZNF215Q9UL58 517 aaPredicted RBP13.07□□□□□ -0.32
DDX11-213ENST00000539049 IQGAP1P46940 1657 aa13.07□□□□□ -0.32
DDX11-213ENST00000539049 ATG3Q9NT62 314 aa13.06□□□□□ -0.32
DDX11-213ENST00000539049 NPHP1O15259 732 aa13.05□□□□□ -0.32
DDX11-213ENST00000539049 MAP2K2P36507 400 aa13.05□□□□□ -0.32
DDX11-213ENST00000539049 PACS2Q86VP3 889 aa13.05□□□□□ -0.32
DDX11-213ENST00000539049 ANKRD20A12PQ8NF67 263 aa13.05□□□□□ -0.32
DDX11-213ENST00000539049 NECTIN2Q92692 538 aa13.05□□□□□ -0.32
DDX11-213ENST00000539049 ABCC2Q92887 1545 aa13.05□□□□□ -0.32
DDX11-213ENST00000539049 OS9Q13438 667 aaPredicted RBP13.05□□□□□ -0.32
DDX11-213ENST00000539049 SLFNL1Q499Z3 407 aa13.05□□□□□ -0.32
DDX11-213ENST00000539049 FBXO3Q9UK99 471 aa13.05□□□□□ -0.32
DDX11-213ENST00000539049 TPD52L1Q16890 204 aaPredicted RBP13.05□□□□□ -0.32
DDX11-213ENST00000539049 CALRP27797 417 aaKnown RBP13.04□□□□□ -0.32
DDX11-213ENST00000539049 RABEP1Q15276 862 aa13.04□□□□□ -0.32
DDX11-213ENST00000539049 TSGA10IPQ3SY00 556 aa13.04□□□□□ -0.32
DDX11-213ENST00000539049 PPP2R5AQ15172 486 aa13.04□□□□□ -0.32
DDX11-213ENST00000539049 RBM28Q9NW13 759 aaKnown RBP13.04□□□□□ -0.32
DDX11-213ENST00000539049 ZGPATQ8N5A5 531 aaKnown RBP13.04□□□□□ -0.32
DDX11-213ENST00000539049 CLSTN1O94985 981 aa13.03□□□□□ -0.32
DDX11-213ENST00000539049 ZDHHC9Q9Y397 364 aa13.03□□□□□ -0.32
DDX11-213ENST00000539049 TRAPPC8Q9Y2L5 1435 aa13.03□□□□□ -0.32
DDX11-213ENST00000539049 PTGS1P23219 599 aa13.03□□□□□ -0.32
DDX11-213ENST00000539049 MAGEA9P43362 315 aa13.03□□□□□ -0.32
DDX11-213ENST00000539049 CEP135Q66GS9 1140 aa13.03□□□□□ -0.32
DDX11-213ENST00000539049 MCTP2Q6DN12 878 aa13.03□□□□□ -0.32
DDX11-213ENST00000539049 DZIP1LQ8IYY4 767 aaKnown RBP13.03□□□□□ -0.32
DDX11-213ENST00000539049 SMARCE1Q969G3 411 aa13.03□□□□□ -0.32
DDX11-213ENST00000539049 ERO1AQ96HE7 468 aa13.03□□□□□ -0.32
DDX11-213ENST00000539049 CCDC189A1A4V9 331 aa13.02□□□□□ -0.32
DDX11-213ENST00000539049 GSCP56915 257 aaPredicted RBP13.02□□□□□ -0.32
DDX11-213ENST00000539049 ST5P78524 1137 aa13.02□□□□□ -0.32
DDX11-213ENST00000539049 RPAINQ86UA6 219 aa13.02□□□□□ -0.32
DDX11-213ENST00000539049 NOB1Q9ULX3 412 aaKnown RBP13.02□□□□□ -0.32
DDX11-213ENST00000539049 SSR1P43307 286 aaKnown RBP13.02□□□□□ -0.33
DDX11-213ENST00000539049 BIRC2Q13490 618 aa13.02□□□□□ -0.33
DDX11-213ENST00000539049 RNF20Q5VTR2 975 aa13.02□□□□□ -0.33
DDX11-213ENST00000539049 ZKSCAN2Q63HK3 967 aa13.02□□□□□ -0.33
DDX11-213ENST00000539049 FBXO18Q8NFZ0 1043 aa13.02□□□□□ -0.33
DDX11-213ENST00000539049 GOLGA5Q8TBA6 731 aa13.02□□□□□ -0.33
DDX11-213ENST00000539049 MYOM1P52179 1685 aa13.02□□□□□ -0.33
DDX11-213ENST00000539049 RARSP54136 660 aaKnown RBP13.01□□□□□ -0.33
DDX11-213ENST00000539049 CALR3Q96L12 384 aaKnown RBP13.01□□□□□ -0.33
DDX11-213ENST00000539049 AK7Q96M32 723 aa13.01□□□□□ -0.33
DDX11-213ENST00000539049 TAOK2Q9UL54 1235 aa13.01□□□□□ -0.33
DDX11-213ENST00000539049 PTPRCP08575 1304 aa13.01□□□□□ -0.33
DDX11-213ENST00000539049 PPP1R12AO14974 1030 aaPredicted RBP13.01□□□□□ -0.33
DDX11-213ENST00000539049 DTNBO60941 627 aa13.01□□□□□ -0.33
DDX11-213ENST00000539049 PNMA6AP0CW24 399 aaPredicted RBP13.01□□□□□ -0.33
DDX11-213ENST00000539049 DCTN1Q14203 1278 aa13.01□□□□□ -0.33
DDX11-213ENST00000539049 MVPQ14764 893 aaKnown RBP13.01□□□□□ -0.33
DDX11-213ENST00000539049 RUNDC1Q96C34 613 aa13.01□□□□□ -0.33
DDX11-213ENST00000539049 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.01□□□□□ -0.33
DDX11-213ENST00000539049 PLEKHG2Q9H7P9 1386 aa13.01□□□□□ -0.33
DDX11-213ENST00000539049 TRPM2O94759 1503 aa13.01□□□□□ -0.33
DDX11-213ENST00000539049 RAPGEF3O95398 923 aa13.01□□□□□ -0.33
DDX11-213ENST00000539049 SLC4A10Q6U841 1118 aa13.01□□□□□ -0.33
DDX11-213ENST00000539049 FHOD1Q9Y613 1164 aa13.01□□□□□ -0.33
DDX11-213ENST00000539049 CFAP65Q6ZU64 1925 aaKnown RBP13□□□□□ -0.33
DDX11-213ENST00000539049 PLCH2O75038 1416 aa13□□□□□ -0.33
DDX11-213ENST00000539049 PLA2G4AP47712 749 aa13□□□□□ -0.33
DDX11-213ENST00000539049 SWT1Q5T5J6 900 aaKnown RBP13□□□□□ -0.33
DDX11-213ENST00000539049 DRC7Q8IY82 874 aa13□□□□□ -0.33
DDX11-213ENST00000539049 SPHKAPQ2M3C7 1700 aa13□□□□□ -0.33
DDX11-213ENST00000539049 TBC1D9Q6ZT07 1266 aa13□□□□□ -0.33
DDX11-213ENST00000539049 PPM1EQ8WY54 764 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms