RNA–Protein interactions for RNA: ENST00000535297.1

TMEM258-203, Transcript of transmembrane protein 258, humanhuman

TSL 2

Gene TMEM258, Length 395 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-203ENST00000535297 COL24A1Q17RW2 1714 aa18.49■□□□□ 0.55
TMEM258-203ENST00000535297 SLC16A10Q8TF71 515 aa18.49■□□□□ 0.55
TMEM258-203ENST00000535297 PPP1R1BQ9UD71 204 aaPredicted RBP18.49■□□□□ 0.55
TMEM258-203ENST00000535297 UBR3Q6ZT12 1888 aa18.48■□□□□ 0.55
TMEM258-203ENST00000535297 PTGER2P43116 358 aa18.48■□□□□ 0.55
TMEM258-203ENST00000535297 GAS2L2Q8NHY3 880 aa18.48■□□□□ 0.55
TMEM258-203ENST00000535297 RSPH6AQ9H0K4 717 aa18.48■□□□□ 0.55
TMEM258-203ENST00000535297 CICQ96RK0 1608 aaPredicted RBP18.48■□□□□ 0.55
TMEM258-203ENST00000535297 RNMTO43148 476 aaKnown RBP18.47■□□□□ 0.55
TMEM258-203ENST00000535297 RALBP1Q15311 655 aa18.47■□□□□ 0.55
TMEM258-203ENST00000535297 ATF5Q9Y2D1 282 aaPredicted RBP18.47■□□□□ 0.55
TMEM258-203ENST00000535297 COL5A3P25940 1745 aaPredicted RBP18.46■□□□□ 0.55
TMEM258-203ENST00000535297 MAP3K5Q99683 1374 aa18.46■□□□□ 0.55
TMEM258-203ENST00000535297 U2AF1L5P0DN76 240 aaPredicted RBP18.46■□□□□ 0.55
TMEM258-203ENST00000535297 PRKAR2BP31323 418 aa18.46■□□□□ 0.55
TMEM258-203ENST00000535297 ATP6V1AP38606 617 aa18.46■□□□□ 0.55
TMEM258-203ENST00000535297 U2AF1Q01081 240 aaKnown RBP eCLIP18.46■□□□□ 0.55
TMEM258-203ENST00000535297 NFATC2IPQ8NCF5 419 aa18.46■□□□□ 0.55
TMEM258-203ENST00000535297 AK7Q96M32 723 aa18.46■□□□□ 0.55
TMEM258-203ENST00000535297 SLC52A2Q9HAB3 445 aa18.46■□□□□ 0.55
TMEM258-203ENST00000535297 ITPK1Q13572 414 aa18.45■□□□□ 0.54
TMEM258-203ENST00000535297 LINC00116Q8NCU8 138 aa18.45■□□□□ 0.54
TMEM258-203ENST00000535297 FLAD1Q8NFF5 587 aa18.45■□□□□ 0.54
TMEM258-203ENST00000535297 SGIP1Q9BQI5 828 aa18.45■□□□□ 0.54
TMEM258-203ENST00000535297 FCHSD2O94868 740 aa18.44■□□□□ 0.54
TMEM258-203ENST00000535297 RBM42Q9BTD8 480 aaKnown RBP18.44■□□□□ 0.54
TMEM258-203ENST00000535297 LGR6Q9HBX8 967 aa18.44■□□□□ 0.54
TMEM258-203ENST00000535297 COL23A1Q86Y22 540 aaPredicted RBP18.43■□□□□ 0.54
TMEM258-203ENST00000535297 TJP1Q07157 1748 aa18.43■□□□□ 0.54
TMEM258-203ENST00000535297 GNAT3A8MTJ3 354 aa18.42■□□□□ 0.54
TMEM258-203ENST00000535297 SLC4A9Q96Q91 983 aa18.42■□□□□ 0.54
TMEM258-203ENST00000535297 SIPA1L3O60292 1781 aaPredicted RBP18.42■□□□□ 0.54
TMEM258-203ENST00000535297 MSH5O43196 834 aa18.41■□□□□ 0.54
TMEM258-203ENST00000535297 SSFA2P28290 1259 aa18.41■□□□□ 0.54
TMEM258-203ENST00000535297 PHACTR3Q96KR7 559 aa18.41■□□□□ 0.54
TMEM258-203ENST00000535297 MYBBP1AQ9BQG0 1328 aaKnown RBP18.41■□□□□ 0.54
TMEM258-203ENST00000535297 UBR2Q8IWV8 1755 aa18.4■□□□□ 0.54
TMEM258-203ENST00000535297 POLD1P28340 1107 aa18.4■□□□□ 0.54
TMEM258-203ENST00000535297 CNTNAP4Q9C0A0 1308 aa18.4■□□□□ 0.54
TMEM258-203ENST00000535297 KCPQ6ZWJ8 1503 aa18.39■□□□□ 0.54
TMEM258-203ENST00000535297 GNPATO15228 680 aa18.39■□□□□ 0.53
TMEM258-203ENST00000535297 PTCD1O75127 700 aaKnown RBP18.39■□□□□ 0.53
TMEM258-203ENST00000535297 ARXQ96QS3 562 aa18.39■□□□□ 0.53
TMEM258-203ENST00000535297 CEMIPQ8WUJ3 1361 aa18.39■□□□□ 0.53
TMEM258-203ENST00000535297 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.38■□□□□ 0.53
TMEM258-203ENST00000535297 RC3H1Q5TC82 1133 aaKnown RBP18.38■□□□□ 0.53
TMEM258-203ENST00000535297 AMIGO3Q86WK7 504 aa18.38■□□□□ 0.53
TMEM258-203ENST00000535297 IL17REQ8NFR9 667 aa18.38■□□□□ 0.53
TMEM258-203ENST00000535297 PHF14O94880 888 aa18.37■□□□□ 0.53
TMEM258-203ENST00000535297 TEFQ10587 303 aa18.37■□□□□ 0.53
TMEM258-203ENST00000535297 MYH14Q7Z406 1995 aaKnown RBP18.37■□□□□ 0.53
TMEM258-203ENST00000535297 NEFMP07197 916 aa18.36■□□□□ 0.53
TMEM258-203ENST00000535297 ADRA2BP18089 450 aa18.35■□□□□ 0.53
TMEM258-203ENST00000535297 SLC39A6Q13433 755 aa18.35■□□□□ 0.53
TMEM258-203ENST00000535297 FHDC1Q9C0D6 1143 aaPredicted RBP18.35■□□□□ 0.53
TMEM258-203ENST00000535297 RTCBQ9Y3I0 505 aaKnown RBP18.35■□□□□ 0.53
TMEM258-203ENST00000535297 DLG5Q8TDM6 1919 aa18.34■□□□□ 0.53
TMEM258-203ENST00000535297 HTATSF1O43719 755 aaKnown RBP18.34■□□□□ 0.53
TMEM258-203ENST00000535297 TTC5Q8N0Z6 440 aa18.34■□□□□ 0.53
TMEM258-203ENST00000535297 RTF1Q92541 710 aaKnown RBP18.34■□□□□ 0.53
TMEM258-203ENST00000535297 PNNQ9H307 717 aaKnown RBP18.34■□□□□ 0.53
TMEM258-203ENST00000535297 C4AP0C0L4 1744 aa18.34■□□□□ 0.53
TMEM258-203ENST00000535297 RPS6KA4O75676 772 aa18.33■□□□□ 0.52
TMEM258-203ENST00000535297 CRKLP46109 303 aaKnown RBP18.33■□□□□ 0.52
TMEM258-203ENST00000535297 MSL1Q68DK7 614 aa18.33■□□□□ 0.52
TMEM258-203ENST00000535297 VSIG10Q8N0Z9 540 aa18.33■□□□□ 0.52
TMEM258-203ENST00000535297 PLEKHF1Q96S99 279 aa18.33■□□□□ 0.52
TMEM258-203ENST00000535297 SYT17Q9BSW7 474 aa18.33■□□□□ 0.52
TMEM258-203ENST00000535297 PRKRIP1Q9H875 184 aaPredicted RBP18.33■□□□□ 0.52
TMEM258-203ENST00000535297 SMIM5Q71RC9 77 aa18.32■□□□□ 0.52
TMEM258-203ENST00000535297 MAPK8IP3Q9UPT6 1336 aa18.31■□□□□ 0.52
TMEM258-203ENST00000535297 TRAPPC3LQ5T215 181 aa18.31■□□□□ 0.52
TMEM258-203ENST00000535297 ZNF790Q6PG37 636 aa18.31■□□□□ 0.52
TMEM258-203ENST00000535297 DNAJC10Q8IXB1 793 aa18.31■□□□□ 0.52
TMEM258-203ENST00000535297 ZNF316A6NFI3 1004 aaPredicted RBP18.3■□□□□ 0.52
TMEM258-203ENST00000535297 MCM10Q7L590 875 aa18.29■□□□□ 0.52
TMEM258-203ENST00000535297 CCDC87Q9NVE4 849 aa18.29■□□□□ 0.52
TMEM258-203ENST00000535297 HEG1Q9ULI3 1381 aa18.29■□□□□ 0.52
TMEM258-203ENST00000535297 DCAF8L1A6NGE4 600 aa18.28■□□□□ 0.52
TMEM258-203ENST00000535297 BTBD11A6QL63 1104 aa18.28■□□□□ 0.52
TMEM258-203ENST00000535297 CYP19A1P11511 503 aaPredicted RBP18.28■□□□□ 0.52
TMEM258-203ENST00000535297 NFE2L2Q16236 605 aa18.28■□□□□ 0.52
TMEM258-203ENST00000535297 INTS5Q6P9B9 1019 aaKnown RBP18.28■□□□□ 0.52
TMEM258-203ENST00000535297 ARHGEF1Q92888 912 aaKnown RBP18.28■□□□□ 0.52
TMEM258-203ENST00000535297 RFC4P35249 363 aa18.27■□□□□ 0.52
TMEM258-203ENST00000535297 KLHL34Q8N239 644 aa18.27■□□□□ 0.52
TMEM258-203ENST00000535297 ZNF496Q96IT1 587 aaPredicted RBP18.27■□□□□ 0.52
TMEM258-203ENST00000535297 FMNL2Q96PY5 1086 aa18.27■□□□□ 0.52
TMEM258-203ENST00000535297 SOS1Q07889 1333 aaPredicted RBP18.26■□□□□ 0.51
TMEM258-203ENST00000535297 DCTN1Q14203 1278 aa18.26■□□□□ 0.51
TMEM258-203ENST00000535297 STARD3NLO95772 234 aa18.25■□□□□ 0.51
TMEM258-203ENST00000535297 WDR43Q15061 677 aaKnown RBP eCLIP18.25■□□□□ 0.51
TMEM258-203ENST00000535297 NLGN1Q8N2Q7 840 aa18.25■□□□□ 0.51
TMEM258-203ENST00000535297 TEX13AQ9BXU3 409 aaPredicted RBP18.25■□□□□ 0.51
TMEM258-203ENST00000535297 KDM3BQ7LBC6 1761 aa18.25■□□□□ 0.51
TMEM258-203ENST00000535297 ZBTB1Q9Y2K1 713 aa18.24■□□□□ 0.51
TMEM258-203ENST00000535297 COL15A1P39059 1388 aa18.24■□□□□ 0.51
TMEM258-203ENST00000535297 USP42Q9H9J4 1324 aaKnown RBP18.23■□□□□ 0.51
TMEM258-203ENST00000535297 KCNQ3O43525 872 aa18.23■□□□□ 0.51
TMEM258-203ENST00000535297 GYS1P13807 737 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 100.5 ms